BAC Information

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BAC

Clone NameB6Ng01-152A22
Chromosome3 (Build37)
Map Location 112,414,684 - 112,415,819
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625585, EG229746, LOC668717
Downstream geneUtp14B-ps, EG433643, OTTMUSG00000022462, LOC668723, Amy2-2, Amy2-1, LOC100043684, LOC100043686, LOC100043688, LOC100043207, Amy1, Rnpc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152A22.bB6Ng01-152A22.g
ACCDH947726DH947727
length1,1391,166
definitionDH947726|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A22, 5' end.DH947727|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaagaaaacaaaaagtgccagatcttgaagaggctggtaatt
gatcagcaagcaaacattaacttataaagaaataataatcttaccctaaa
ttctttaccttactttgagtgatctttcattttctgctctcatgttacat
tgccagttgtttttgataaacaatcactgatgctttaatctgcattgtca
aatatatctatgataaacgtttagaaaagttacgaatgagtcaaatacaa
agtagaagtcatatgcagttattttgtttactgggctgagttagctacag
gttaagcctttaaatactaaatttaactccacatatccatgatcaattgc
ttgaacagaaatatttaagtgggggcttgtttaagagttctagaatgtaa
gtctgttatttatggatggtgcaggacagtacctgagatccttacatcct
gatgcacaggcaacaggcagtgagaaagacactaggcctgacatgggctt
ttgaaacctcaaaatctgttatagtgactcacctcctaaagcaaggccac
atgtcctaatccattccaaaaattcatcaacagaagactgagcttacaaa
tgtatgagactatcattcaatctaccacaagcattgaatgcatcctgctc
ttaaatgcattgtttaatgctaaggacacagaaaagaatttccagcattt
taaaatattatttctgcctcaatttgtgctttataaatgattgacatatt
tttttttggtagaggaactttaatattttctaagtgaatatattctgtca
attcctaaatttgagttggctgcaaaatttcttccttcaatagaatatag
cagaggtcattgtatgtattttggaacctaagcctcaaggaagtatactg
aaatttcacttccttttagaatttgatttctgatatgagagtaagccaat
gaaactagcttgtacacaagagacaattggattcatgagttatctcatat
atttgagaatccagccaacatcagcagagcttcccagagaaaagaaactt
tgtgtaaaatggttttcttgaaatacctgagcccctacttcctctttgct
tttctaaatgaatatagaacaagaagagggctttattgc
gaattcctgatctttccatatcttttatcatgaatgggtgttggaacttg
tcaaatgctttctctgcatccaacaagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggatttttgtatattaaacc
atccctgcatccctggaataaaaccttcttggtcaggatggatgattgct
ttaatgtgttcttggattagattagggagaattttattaagtatttttgc
ttcgatatgcataagggaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagtag
ggtagagtaccttctacttctattttgtggaatagtttgtgaagaactgg
aattagatcttctttgaaggtctgatagaactctgcacttaacccatctg
gtcttggactttttttggtttggagacgattaacgactgcttctatttct
ttaggggatatgggactgtttagatcgttaacttgatcctgatttaactt
tggtaccttgtatctgtctagaaatttgtccatttcgtctaggttttcca
gttttgttgagtatatccttttgtagaaggttctgatggtgttttggatt
tcttcaggatctgttgttatgtcttccttttcatttctgattttgttaat
taggatgctgtctctgtgccttctagagagtctagctaagggtttatcta
tctttgttgattttctcaaagaaccaactcctcgtttggttaattcattg
aatagttcttcttgtttccacttggttgatttcacccctaagtttgatta
tttccttctgtctactcctcttaggtgaatttgcttcctttttctagagc
atttagatgtgttgtcaagctgctagtgtggtgctctctctcttttcttt
tggaggcactcagagctatggagttttcctcttagaaatgttttcattgt
gtcccatagggttggggtattgttgggccttcattttcattaaacctcta
agaagtctttaatttctttctttatccttcctctgaccaaggtactctgg
aaagaggaggtggtcagatcacaagagaaagtggcccttctattattata
tttggattgaggaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_112414684_112415819
seq2: B6Ng01-152A22.b_47_1185 (reverse)

seq1  GCAAT-AAGACCACTTCTTG-TCTATA-TCATTTAGATAAGCAAAGAGG-  46
      ||||| ||| || ||||||| |||||| ||||||||| ||||||||||| 
seq2  GCAATAAAGCCCTCTTCTTGTTCTATATTCATTTAGAAAAGCAAAGAGGA  50

seq1  AGTAGGGGCTCAGGTAATATCAAGAAAACATTTTTACACAAAGTTTCTTT  96
      ||||||||||||||| || ||||||||||  |||||||||||||||||||
seq2  AGTAGGGGCTCAGGT-ATTTCAAGAAAACCATTTTACACAAAGTTTCTTT  99

seq1  TCCTCTGGGAAGCTCTGCTGATGTTGGCTGGATTCTCAAATATATGAGAT  146
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-CTCTGGGAAGCTCTGCTGATGTTGGCTGGATTCTCAAATATATGAGAT  148

seq1  AACTCATGAATCCAATTGTCTCTTGTGTACAAGCTAGTTTCATTGGCTTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATGAATCCAATTGTCTCTTGTGTACAAGCTAGTTTCATTGGCTTA  198

seq1  CTCTCATATCAGAAATCAAATTCTAAAAGGAAGTGAAATTTCAGTATACT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATATCAGAAATCAAATTCTAAAAGGAAGTGAAATTTCAGTATACT  248

seq1  TCCTTGAGGCTTAGGTTCCAAAATACATACAATGACCTCTGCTATATTCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAGGCTTAGGTTCCAAAATACATACAATGACCTCTGCTATATTCT  298

seq1  ATTGAAGGAAGAAATTTTGCAGCCAACTCAAATTTAGGAATTGACAGAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGGAAGAAATTTTGCAGCCAACTCAAATTTAGGAATTGACAGAAT  348

seq1  ATATTCACTTAGAAAATATTAAAGTTCCTCTACC-AAAAAAAATATGTCA  395
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATATTCACTTAGAAAATATTAAAGTTCCTCTACCAAAAAAAAATATGTCA  398

seq1  ATCATTTATAAAGCACAAATTGAGGCAGAAATAATATTTTAAAATGCTGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTATAAAGCACAAATTGAGGCAGAAATAATATTTTAAAATGCTGG  448

seq1  AAATTCTTTTCTGTGTCCTTAGCATTAAACAATGCATTTAAGAGCAGGAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTTTTCTGTGTCCTTAGCATTAAACAATGCATTTAAGAGCAGGAT  498

seq1  GCATTCAATGCTTGTGGTAGATTGAATGATAGTCTCATACATTTGTAAGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCAATGCTTGTGGTAGATTGAATGATAGTCTCATACATTTGTAAGC  548

seq1  TCAGTCTTCTGTTGATGAATTTTTGGAATGGATTAGGACATGTGGCCTTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTCTGTTGATGAATTTTTGGAATGGATTAGGACATGTGGCCTTG  598

seq1  CTTTAGGAGGTGAGTCACTATAACAGATTTTGAGGTTTCAAAAGCCCATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGAGGTGAGTCACTATAACAGATTTTGAGGTTTCAAAAGCCCATG  648

seq1  TCAGGCCTAGTGTCTTTCTCACTGCCTGTTGCCTGTGCATCAGGATGTAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCTAGTGTCTTTCTCACTGCCTGTTGCCTGTGCATCAGGATGTAA  698

seq1  GGATCTCAGGTACTGTCCTGCACCATCCATAAATAACAGACTTACATTCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCAGGTACTGTCCTGCACCATCCATAAATAACAGACTTACATTCT  748

seq1  AGAACTCTTAAACAAGCCCCCACTTAAATATTTCTGTTCAAGCAATTGAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTTAAACAAGCCCCCACTTAAATATTTCTGTTCAAGCAATTGAT  798

seq1  CATGGATATGTGGAGTTAAATTTAGTATTTAAAGGCTTAACCTGTAGCTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATATGTGGAGTTAAATTTAGTATTTAAAGGCTTAACCTGTAGCTA  848

seq1  ACTCAGCCCAGTAAACAAAATAACTGCATATGACTTCTACTTTGTATTTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCCCAGTAAACAAAATAACTGCATATGACTTCTACTTTGTATTTG  898

seq1  ACTCATTCGTAACTTTTCTAAACGTTTATCATAGATATATTTGACAATGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTCGTAACTTTTCTAAACGTTTATCATAGATATATTTGACAATGC  948

seq1  AGATTAAAGCATCAGTGATTGTTTATCAAAAACAACTGGCAATGTAACAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAGCATCAGTGATTGTTTATCAAAAACAACTGGCAATGTAACAT  998

seq1  GAGAGCAGAAAATGAAAGATCACTCAAAGTAAGGTAAAGAATTTAGGGTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGAAAATGAAAGATCACTCAAAGTAAGGTAAAGAATTTAGGGTA  1048

seq1  AGATTATTATTTCTTTATAAGTTAATGTTTGCTTGCTGATCAATTACCAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTATTTCTTTATAAGTTAATGTTTGCTTGCTGATCAATTACCAG  1098

seq1  CCTCTTCAAGATCTGGCACTTTTTGTTTTCTTAAAGAATTC  1136
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCAAGATCTGGCACTTTTTGTTTTCTTAAAGAATTC  1139