BAC Information

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BAC

Clone NameB6Ng01-152H13
Chromosome3 (Build37)
Map Location 56,451,841 - 56,586,592
singlet/doubletdoublet
Overlap genenone
Upstream geneMab21l1, 4933417G07Rik
Downstream geneLOC100040139, LOC666585, Tm4sf1, LOC383862, Tm4sf4, Wwtr1, Commd2, Gm410, EG623114, Rnf13, LOC675537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152H13.bB6Ng01-152H13.g
ACCDH948037DH948038
length1,091606
definitionDH948037|Mus musculus domesticus DNA, BAC clone: B6Ng01-152H13, 5' end.DH948038|Mus musculus domesticus DNA, BAC clone: B6Ng01-152H13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,585,489 - 56,586,592)(56,451,841 - 56,452,446)
sequence
gaattcaacaaggacagactcagatctcaagaaagaaggagatttgatag
agatgaggacttaaaagaaaaacgcagaaaccatttccattcactttgag
aaaagaggctttagtatagagagatgggcttcggaatgactttatcccta
gagagaatgatagggtagataaccacattaaatctccttaggagcaagga
atttgctaaggaagagataaataggagtagtggctgcaggaagagctaca
gctgatatttaatttggggactatggaagatgttcctctgagtggtgtga
atgataacagtgagccgatgcagagcttaaggtaatgacaaagaagacat
aacattgtagacacaataggcaacgtgagccaattcagagaaaaaagcag
cagaagcaagccttggcattgacctcacagcaacaaaggaagtgttcaag
agtggatcagatggactgggcactggatcagagggagcacaaggatgcat
gttccacttcattcattctgctctgtcaatgcagtaagaagctaccagct
gagaaggaggaggaggaaagagagagattattttacttttgcattgagaa
ggaagagagagtagattatatgatgtcatatgatttcagtatgaattgcc
agggctcccactgaaaatatgtttgctaatatactaattagcaatatttt
cagctgcaaagcataatgctcatgacattcttgattggatggataatttg
cttctctttgtgtattcaaattcagtaatttttcctttatgaattttgaa
atatgaatattcttagaggatattttgaagttatattaaaaatactatgc
ttgtcccagggtgagatgtctcagttgagtcaaggtggtattgccaggga
ggaagacttgaggtctgtccctaggatacacatggagaagagagaaccaa
cttctgcaagacagcctttgactcataaatgtaccattgtgcacatgagg
gcatgcacacacacacaacacatatacactaataaataagtagaattaat
tttaaaaagaaagcttgttatttaatggattttcatagtaa
gaattcccatcaagtagaaaacattgtccttagcattgagtggaccacaa
ctgtgtatatacacctcaaaatacagccctgtacaaagcagctactccat
aatctttgttgaattaaatatgttgaaatacatggaacaagtaatattta
atcttgttctcagaattttttggagatgattctttattggtctttatttc
actctctcctttctctgccttcacctcttcctcttctttttgagtgttct
cagtactcacatgcagcccaatactatttgttgaaggttaatgccaaatc
tttttttttttttctggatgactttgtaagatttattttagctctgttca
gcatcagtagagatacagtttaagcatctttttattgcacaccaaaaagc
actttctttttcaaacaggcctggtagcgacaaggtcggatcagccagga
ggcccaccattaagcactgttttcctccactgtctcactgttgtcatggc
aattcctcatcaggctcctgagaactctcatctcttagctcctcttatct
cagtgtgagaggttggaactctctctctctctccttccttccttccttcc
ttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_56585489_56586592
seq2: B6Ng01-152H13.b_48_1138 (reverse)

seq1  TTACTATGAAAATATTACAATTAAATAACATACCTTTTCTTTTTAAAAAT  50
      |||||||||||||    | |||||||||||  |  |||||||||||||  
seq2  TTACTATGAAAAT----CCATTAAATAACAAGC--TTTCTTTTTAAAA--  42

seq1  TAAATTCTACTTATTTATTAGTGTATATGTGTTTGTGTGTGTGTGCATGC  100
      | ||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTAATTCTACTTATTTATTAGTGTATATGTG-TTGTGTGTGTGTGCATGC  91

seq1  CCTCATGTGCACAATGGTACATTTATGGAGGTCAAAGGCTGTCTTGCAGA  150
      |||||||||||||||||||||||||||   ||||||||||||||||||||
seq2  CCTCATGTGCACAATGGTACATTTATG--AGTCAAAGGCTGTCTTGCAGA  139

seq1  AGTTGGTTCTCTCCTTCTTCCATGTGTATCCTAGGGACAGACCTCAAGTC  200
      |||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  AGTTGGTTCTCT-CTTC-TCCATGTGTATCCTAGGGACAGACCTCAAGTC  187

seq1  TTCCTCCCTGGCAATACCACCTTGACTCAACTGAGACATCTCACCCTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCTGGCAATACCACCTTGACTCAACTGAGACATCTCACCCTGGG  237

seq1  ACAAGCATAGTATTTTTAATATAACTTCAAAATATCCTCTAAGAATATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCATAGTATTTTTAATATAACTTCAAAATATCCTCTAAGAATATTC  287

seq1  ATATTTCAAAATTCATAAAGGAAAAATTACTGAATTTGAATACACAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCAAAATTCATAAAGGAAAAATTACTGAATTTGAATACACAAAGA  337

seq1  GAAGCAAATTATCCATCCAATCAAGAATGTCATGAGCATTATGCTTTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAATTATCCATCCAATCAAGAATGTCATGAGCATTATGCTTTGCA  387

seq1  GCTGAAAATATTGCTAATTAGTATATTAGCAAACATATTTTCAGTGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAATATTGCTAATTAGTATATTAGCAAACATATTTTCAGTGGGAG  437

seq1  CCCTGGCAATTCATACTGAAATCATATGACATCATATAATCTACTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCAATTCATACTGAAATCATATGACATCATATAATCTACTCTCTC  487

seq1  TTCCTTCTCAATGCAAAAGTAAAATAATCTCTCTCTTTCCTCCTCCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTCAATGCAAAAGTAAAATAATCTCTCTCTTTCCTCCTCCTCCT  537

seq1  TCTCAGCTGGTAGCTTCTTACTGCATTGACAGAGCAGAATGAATGAAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTGGTAGCTTCTTACTGCATTGACAGAGCAGAATGAATGAAGTG  587

seq1  GAACATGCATCCTTGTGCTCCCTCTGATCCAGTGCCCAGTCCATCTGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGCATCCTTGTGCTCCCTCTGATCCAGTGCCCAGTCCATCTGATC  637

seq1  CACTCTTGAACACTTCCTTTGTTGCTGTGAGGTCAATGCCAAGGCTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTGAACACTTCCTTTGTTGCTGTGAGGTCAATGCCAAGGCTTGCT  687

seq1  TCTGCTGCTTTTTTCTCTGAATTGGCTCACGTTGCCTATTGTGTCTACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCTTTTTTCTCTGAATTGGCTCACGTTGCCTATTGTGTCTACAA  737

seq1  TGTTATGTCTTCTTTGTCATTACCTTAAGCTCTGCATCGGCTCACTGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGTCTTCTTTGTCATTACCTTAAGCTCTGCATCGGCTCACTGTTA  787

seq1  TCATTCACACCACTCAGAGGAACATCTTCCATAGTCCCCAAATTAAATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCACACCACTCAGAGGAACATCTTCCATAGTCCCCAAATTAAATAT  837

seq1  CAGCTGTAGCTCTTCCTGCAGCCACTACTCCTATTTATCTCTTCCTTAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTAGCTCTTCCTGCAGCCACTACTCCTATTTATCTCTTCCTTAGC  887

seq1  AAATTCCTTGCTCCTAAGGAGATTTAATGTGGTTATCTACCCTATCATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTTGCTCCTAAGGAGATTTAATGTGGTTATCTACCCTATCATTC  937

seq1  TCTCTAGGGATAAAGTCATTCCGAAGCCCATCTCTCTATACTAAAGCCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGGGATAAAGTCATTCCGAAGCCCATCTCTCTATACTAAAGCCTC  987

seq1  TTTTCTCAAAGTGAATGGAAATGGTTTCTGCGTTTTTCTTTTAAGTCCTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAAAGTGAATGGAAATGGTTTCTGCGTTTTTCTTTTAAGTCCTC  1037

seq1  ATCTCTATCAAATCTCCTTCTTTCTTGAGATCTGAGTCTGTCCTTGTTGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTATCAAATCTCCTTCTTTCTTGAGATCTGAGTCTGTCCTTGTTGA  1087

seq1  ATTC  1104
      ||||
seq2  ATTC  1091

seq1: chr3_56451841_56452446
seq2: B6Ng01-152H13.g_66_671

seq1  GAATTCCCATCAAGTAGAAAACATTGTCCTTAGCATTGAGTGGACCACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATCAAGTAGAAAACATTGTCCTTAGCATTGAGTGGACCACAA  50

seq1  CTGTGTATATACACCTCAAAATACAGCCCTGTACAAAGCAGCTACTCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATATACACCTCAAAATACAGCCCTGTACAAAGCAGCTACTCCAT  100

seq1  AATCTTTGTTGAATTAAATATGTTGAAATACATGGAACAAGTAATATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTGTTGAATTAAATATGTTGAAATACATGGAACAAGTAATATTTA  150

seq1  ATCTTGTTCTCAGAATTTTTTGGAGATGATTCTTTATTGGTCTTTATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTTCTCAGAATTTTTTGGAGATGATTCTTTATTGGTCTTTATTTC  200

seq1  ACTCTCTCCTTTCTCTGCCTTCACCTCTTCCTCTTCTTTTTGAGTGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTCCTTTCTCTGCCTTCACCTCTTCCTCTTCTTTTTGAGTGTTCT  250

seq1  CAGTACTCACATGCAGCCCAATACTATTTGTTGAAGGTTAATGCCAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACTCACATGCAGCCCAATACTATTTGTTGAAGGTTAATGCCAAATC  300

seq1  TTTTTTTTTTTTTCTGGATGACTTTGTAAGATTTATTTTAGCTCTGTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTCTGGATGACTTTGTAAGATTTATTTTAGCTCTGTTCA  350

seq1  GCATCAGTAGAGATACAGTTTAAGCATCTTTTTATTGCACACCAAAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGTAGAGATACAGTTTAAGCATCTTTTTATTGCACACCAAAAAGC  400

seq1  ACTTTCTTTTTCAAACAGGCCTGGTAGCGACAAGGTCGGATCAGCCAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTTTCAAACAGGCCTGGTAGCGACAAGGTCGGATCAGCCAGGA  450

seq1  GGCCCACCATTAAGCACTGTTTTCCTCCACTGTCTCACTGTTGTCATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACCATTAAGCACTGTTTTCCTCCACTGTCTCACTGTTGTCATGGC  500

seq1  AATTCCTCATCAGGCTCCTGAGAACTCTCATCTCTTAGCTCCTCTTATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTCATCAGGCTCCTGAGAACTCTCATCTCTTAGCTCCTCTTATCT  550

seq1  CAGTGTGAGAGGTTGGAACTCTCTCTCTCTCTCCTTCCTTCCTTCCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGAGAGGTTGGAACTCTCTCTCTCTCTCCTTCCTTCCTTCCTTCC  600

seq1  TTCCTT  606
      ||||||
seq2  TTCCTT  606