BAC Information

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BAC

Clone NameB6Ng01-152M20
Chromosome3 (Build37)
Map Location 123,133,754 - 123,247,992
singlet/doubletdoublet
Overlap genePrss12, EG668804, Ndst3
Upstream geneBcar3, Fnbp1l, Ppia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2, Synpo2, Sec24d, G430022H21Rik
Downstream geneLOC100043333, EG668809, Tram1l1, LOC100043740, 1700006A11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152M20.bB6Ng01-152M20.g
ACCDH948287DH948288
length1,1861,136
definitionDH948287|Mus musculus domesticus DNA, BAC clone: B6Ng01-152M20, 5' end.DH948288|Mus musculus domesticus DNA, BAC clone: B6Ng01-152M20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,133,754 - 123,134,939)(123,246,859 - 123,247,992)
sequence
gaattctagttaatgaaatccttaacaagatttctccttgtgactcattg
tcacattaaccaaaccccaccaatacagcaactgaaatctagcaagcaga
ttcgagataactaagacattgctattcctcagagctatgacagaaaacga
ggattcttctcagctatgatgtcaacacatcatgtgactgtggttaaaac
aaacaaacaaaacaaaaacaaaacaaaaaccccaagacaacaaaaatgta
tgagattatacatgttttgcaacttaaatgtcagtggtcttcaactgaac
tgatagtataaatgttaggtgtgattgggaaggttataatgattcatttc
ctagaaattccagactgtccactatgtagacaaaatatcaaccaactacc
taactaaaagatcaaatatttttattaagctattagtgtcaccttatgtc
aacctattttaatgatttcagaaaattatgagcagagtagagaaaattaa
acagcaagaaatataagtaatttcatcatttttctgtagtaggatgagta
ttaacagacaatattgatacagtggcacaaagacaagaagtaattcttct
tgcgatactttattgaatagagacaggcacagaagttcagtgtgtcagcg
ggacttggggtaacctccaatgtctacatgctgcagggggctgtgttgtg
acttctcttcaaccccagaagaaagataagaaacagatcctttgattcct
tcaaccttttattccactattacagagaaagtttcaaagtggcacaccta
ccatacaagcaacggatttccaaagaggaattttaataatgatggagcat
gtgtgcagaagaggaaaacagaaaccaggagggagaaccaaagtcgttta
gaaagatatcttgccacgggtgtgggaaagagacattgctttgggcaggg
ctggaatccagaagaggaagcgcagagatgcaagtggttaacaaagccca
ataggaaatcaggagcagctaagttcagttcgttgtcctcccaaaggctt
gggcaagtggatttctttagcaagttctggtaggcctatttcagaaaact
ggctgggtccacttcagggaagtctggagcgttcccaggcagggcgctct
ccacagaaacctggactcacctgtggcttcaatttc
gaattccaggacagccagggctatacagaaaaaccctgtctcgaaaaaaa
aaaatatatatatatatatattttaatttaataattccatgcaatatatt
ttaattactttcatctcctctctcctcaccctaattccatccatacacac
cctacattagcatccctcttccaactacatgacttttttcttttcctcca
catttaatatcatcaccatcatcaatttctttggtcatttcacccctccc
ccaactcctcccagataaaactcagttccacgaaggatttgagtttgcat
ctgctgttaaattctattccatgacagtttaaaaagtggggaaaaggttt
ctccttcctttcagcaccccttgcaataaagagttggcagaaagacatca
aaacctatgtatgtagtgtaccaaccatatgtggagatgtgttagacact
ctagtttaggggccaaaggatactataactctgaagtttcaagctttcgt
cccaggagtctcttacttgccgttacctgctgggccagttttctatactt
ctagtatggccagttttgtggagttttagttcaacaattgatagacacta
gctttaagtatttaacattcaacttaaccttaaagaaagctgagtgcttt
tagtttgcagctagaaattcaagtccactttctgctttctgctttaagta
tctctttgaaaagaaaagcttttattttctaaacgattttctatttcaag
ttggcctatctttgtgttttttttatagggttctcgcaaggtattgtgtt
tcagaaagaaaaaaaaaaagaagtaaagtagtctataaagacatcatttt
cttttttcttgtagagtggtccttgacctgcatgctatgtgtttgtcctc
tctgcatcttgctcagcagaaagctttttttattcatctccactgctgaa
aaaggcacttgtgaacttgagagacagaccatcaagaaacacactatata
caaagaactgtggggtcactgtgcacctggaatgagctagctaaaattac
cattaatgtgattcctcttaactgtctgcagtagacaggcaaagatttgc
ggtaatcttggtgaagcgagtttccaatccagcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_123133754_123134939
seq2: B6Ng01-152M20.b_45_1230

seq1  GAATTCTAGTTAATGAAATCCTTAACAAGATTTCTCCTTGTGACTCATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTTAATGAAATCCTTAACAAGATTTCTCCTTGTGACTCATTG  50

seq1  TCACATTAACCAAACCCCACCAATACAGCAACTGAAATCTAGCAAGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTAACCAAACCCCACCAATACAGCAACTGAAATCTAGCAAGCAGA  100

seq1  TTCGAGATAACTAAGACATTGCTATTCCTCAGAGCTATGACAGAAAACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGATAACTAAGACATTGCTATTCCTCAGAGCTATGACAGAAAACGA  150

seq1  GGATTCTTCTCAGCTATGATGTCAACACATCATGTGACTGTGGTTAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTTCTCAGCTATGATGTCAACACATCATGTGACTGTGGTTAAAAC  200

seq1  AAACAAACAAAACAAAAACAAAACAAAAACCCCAAGACAACAAAAATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAAACAAAAACAAAACAAAAACCCCAAGACAACAAAAATGTA  250

seq1  TGAGATTATACATGTTTTGCAACTTAAATGTCAGTGGTCTTCAACTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTATACATGTTTTGCAACTTAAATGTCAGTGGTCTTCAACTGAAC  300

seq1  TGATAGTATAAATGTTAGGTGTGATTGGGAAGGTTATAATGATTCATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTATAAATGTTAGGTGTGATTGGGAAGGTTATAATGATTCATTTC  350

seq1  CTAGAAATTCCAGACTGTCCACTATGTAGACAAAATATCAACCAACTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATTCCAGACTGTCCACTATGTAGACAAAATATCAACCAACTACC  400

seq1  TAACTAAAAGATCAAATATTTTTATTAAGCTATTAGTGTCACCTTATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAAAGATCAAATATTTTTATTAAGCTATTAGTGTCACCTTATGTC  450

seq1  AACCTATTTTAATGATTTCAGAAAATTATGAGCAGAGTAGAGAAAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATTTTAATGATTTCAGAAAATTATGAGCAGAGTAGAGAAAATTAA  500

seq1  ACAGCAAGAAATATAAGTAATTTCATCATTTTTCTGTAGTAGGATGAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAGAAATATAAGTAATTTCATCATTTTTCTGTAGTAGGATGAGTA  550

seq1  TTAACAGACAATATTGATACAGTGGCACAAAGACAAGAAGTAATTCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGACAATATTGATACAGTGGCACAAAGACAAGAAGTAATTCTTCT  600

seq1  TGCGATACTTTATTGAATAGAGACAGGCACAGAAGTTCAGTGTGTCAGCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGATACTTTATTGAATAGAGACAGGCACAGAAGTTCAGTGTGTCAGCG  650

seq1  GGACTTGGGGTAACCTCCAATGTCTACATGCTGCAGGGGGCTGTGTTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGGGGTAACCTCCAATGTCTACATGCTGCAGGGGGCTGTGTTGTG  700

seq1  ACTTCTCTTCAACCCCAGAAGAAAGATAAGAAACAGATCCTTTGATTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCTTCAACCCCAGAAGAAAGATAAGAAACAGATCCTTTGATTCCT  750

seq1  TCAACCTTTTATTCCACTATTACAGAGAAAGTTTCAAAGTGGCACACCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTTTTATTCCACTATTACAGAGAAAGTTTCAAAGTGGCACACCTA  800

seq1  CCATACAAGCAACGGATTTCCAAAGAGGAATTTTAATAATGATGGAGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACAAGCAACGGATTTCCAAAGAGGAATTTTAATAATGATGGAGCAT  850

seq1  GTGTGCAGAAGAGGAAAACAGAAACCAGGAGGGGAGAACCAAAGTCGTTT  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTGTGCAGAAGAGGAAAACAGAAACCAGGA-GGGAGAACCAAAGTCGTTT  899

seq1  AGAAAAGATATCTTGCCACGGGTGTGGGAAAGAGAACATTGCTTTGGGCA  950
      || ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AG-AAAGATATCTTGCCACGGGTGTGGGAAAGAG-ACATTGCTTTGGGCA  947

seq1  GGGCTGGAATCCAGAAGAGGAAGCGCAGAGATGCAAGGTGGTAACAAAGC  1000
      |||||||||||||||||||||||||||||||||||||  | |||||||||
seq2  GGGCTGGAATCCAGAAGAGGAAGCGCAGAGATGCAAGTGGTTAACAAAGC  997

seq1  CC-ATAGGAAATCAAGAGCAGCTAAGTTCAGTTCGTTTGTTCCTCCCAAA  1049
      || ||||||||||| ||||||||||||||||||||||   ||||||||||
seq2  CCAATAGGAAATCAGGAGCAGCTAAGTTCAGTTCGTT--GTCCTCCCAAA  1045

seq1  GGGCTTGGGCAAGTGGA-TTCTTTAGCAAGTCCTGCTA-GCCTATTCAAG  1097
       |||||||||||||||| ||||||||||||| ||| || |||||||  ||
seq2  -GGCTTGGGCAAGTGGATTTCTTTAGCAAGTTCTGGTAGGCCTATTTCAG  1094

seq1  AAAACT-GCTGGTCACAC-TCAGGAAAGTCTGGGAGC-TGCCCAGGCAGG  1144
      |||||| |||||   ||| ||||| |||||| ||||| | ||||||||||
seq2  AAAACTGGCTGGGTCCACTTCAGGGAAGTCT-GGAGCGTTCCCAGGCAGG  1143

seq1  CCGCTCTCCACAGGAACCT-GACTCAACTTGTGGCTTC-ATTTC  1186
       |||||||||||| ||||| ||||| || ||||||||| |||||
seq2  GCGCTCTCCACAGAAACCTGGACTC-ACCTGTGGCTTCAATTTC  1186

seq1: chr3_123246859_123247992
seq2: B6Ng01-152M20.g_71_1206 (reverse)

seq1  CCTGCTGGATGTGAAACTGCTTTCAC--AGATTACCGC-TATCTTGCCCT  47
      ||||||||||  ||||||   |||||  ||||||||||  |||||  |||
seq2  CCTGCTGGATTGGAAACTCGCTTCACCAAGATTACCGCAAATCTTTGCCT  50

seq1  G-CTACTTGCAGGACCAGGTAAGA-GAATCACATAATGGGTAATTTTAGC  95
      | |||| |||||   ||| ||||| ||||||||| |  ||||||||||||
seq2  GTCTAC-TGCAG--ACAGTTAAGAGGAATCACATTAATGGTAATTTTAGC  97

seq1  TAGCTACATTCCAGGTGCACAGTGA-CCCACAGTTCTTTGTATATAGTGT  144
      ||||| ||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAGCT-CATTCCAGGTGCACAGTGACCCCACAGTTCTTTGTATATAGTGT  146

seq1  GTTTCTTTGATGGTCTGTCTCTCAAGTTCAC-AGTGCCTTTTTCAGCAGT  193
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTTTC-TTGATGGTCTGTCTCTCAAGTTCACAAGTGCCTTTTTCAGCAGT  195

seq1  GGAGATGAATAAAAAAAGCTTTCTGCTGAGCAGGATGCAGAGAGGACAAA  243
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGAGATGAATAAAAAAAGCTTTCTGCTGAGCAAGATGCAGAGAGGACAAA  245

seq1  CACATAGCATGCAGGTCAAGGACCACTCTACAAGAAAAA--GAAATGATG  291
      |||||||||||||||||||||||||||||||||||||||   ||||||||
seq2  CACATAGCATGCAGGTCAAGGACCACTCTACAAGAAAAAAGAAAATGATG  295

seq1  TCTTTATAGACTACTTTACTTCTTTTTTTTTTTTCTTTCTGAAACACAAT  341
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCTTTATAGACTACTTTACTTC-TTTTTTTTTTTCTTTCTGAAACACAAT  344

seq1  ACCTTGCGAGAAACCCTATAAAAAAAACACAAAGATAGGCCAACTTGAAA  391
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCGAG-AACCCTATAAAAAAAACACAAAGATAGGCCAACTTGAAA  393

seq1  TAGAAAATCGTTTAGAAAATAAAAGCTTTTCTTTTCAAAGAGATACTTAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATCGTTTAGAAAATAAAAGCTTTTCTTTTCAAAGAGATACTTAA  443

seq1  AGCAGAAAGCAGAAAGTGGACTTGAATTTCTAGCTGCAAACTAAAAGCAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAGCAGAAAGTGGACTTGAATTTCTAGCTGCAAACTAAAAGCAC  493

seq1  TCAGCTTTCTTTAAGGTTAAGTTGAATGTTAAATACTTAAAGCTAGTGTC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTCTTTAAGGTTAAGTTGAATGTTAAATACTTAAAGCTAGTGTC  543

seq1  TATCAATTGTTGAACTAAAACTCCACAAAACTGGCCATACTAGAAGTATA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATTGTTGAACTAAAACTCCACAAAACTGGCCATACTAGAAGTATA  593

seq1  GAAAACTGGCCCAGCAGGTAACGGCAAGTAAGAGACTCCTGGGACGAAAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTGGCCCAGCAGGTAACGGCAAGTAAGAGACTCCTGGGACGAAAG  643

seq1  CTTGAAACTTCAGAGTTATAGTATCCTTTGGCCCCTAAACTAGAGTGTCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAACTTCAGAGTTATAGTATCCTTTGGCCCCTAAACTAGAGTGTCT  693

seq1  AACACATCTCCACATATGGTTGGTACACTACATACATAGGTTTTGATGTC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATCTCCACATATGGTTGGTACACTACATACATAGGTTTTGATGTC  743

seq1  TTTCTGCCAACTCTTTATTGCAAGGGGTGCTGAAAGGAAGGAGAAACCTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCAACTCTTTATTGCAAGGGGTGCTGAAAGGAAGGAGAAACCTT  793

seq1  TTCCCCACTTTTTAAACTGTCATGGAATAGAATTTAACAGCAGATGCAAA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACTTTTTAAACTGTCATGGAATAGAATTTAACAGCAGATGCAAA  843

seq1  CTCAAATCCTTCGTGGAACTGAGTTTTATCTGGGAGGAGTTGGGGGAGGG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATCCTTCGTGGAACTGAGTTTTATCTGGGAGGAGTTGGGGGAGGG  893

seq1  GTGAAATGACCAAAGAAATTGATGATGGTGATGATATTAAATGTGGAGGA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATGACCAAAGAAATTGATGATGGTGATGATATTAAATGTGGAGGA  943

seq1  AAAGAAAAAAGTCATGTAGTTGGAAGAGGGATGCTAATGTAGGGTGTGTA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAAGTCATGTAGTTGGAAGAGGGATGCTAATGTAGGGTGTGTA  993

seq1  TGGATGGAATTAGGGTGAGGAGAGAGGAGATGAAAGTAATTAAAATATAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGAATTAGGGTGAGGAGAGAGGAGATGAAAGTAATTAAAATATAT  1043

seq1  TGCATGGAATTATTAAATTAAAATATATATATATATATATTTTTTTTTTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGAATTATTAAATTAAAATATATATATATATATATTTTTTTTTTT  1093

seq1  CGAGACAGGGTTTTTCTGTATAGCCCTGGCTGTCCTGGAATTC  1134
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGACAGGGTTTTTCTGTATAGCCCTGGCTGTCCTGGAATTC  1136