BAC Information

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BAC

Clone NameB6Ng01-152O11
Chromosome3 (Build37)
Map Location 16,601,007 - 16,602,097
singlet/doubletsinglet
Overlap geneLOC100040034
Upstream geneLOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3
Downstream geneLOC100040059, EG383936, LOC622737
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152O11.bB6Ng01-152O11.g
ACCDH948361DH948362
length1,2511,086
definitionDH948361|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O11, 5' end.DH948362|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctggcatagtagataccaagaagatattgatacatcagtcaaaga
aagtacatagtgttactgtgggaaatatttaagaacaaatcatcatctgg
ctactcttgctgcctccatggtgagcctcatgcagcaactgcccatctca
tggttctcttgctaagaattctgctcacattcgcagccatccaccctctg
catttatgggtcacaaatcccagtaaccaagtaaaatcaaaactctagaa
gcttgtaatttatcagtcagatttatattagtaaatcctcaacccataaa
attccagcacaataaactcaaaactcatttgatataaacacaagttacac
acctagatggggtagacaaactctaattattattattatctatctaagaa
ataccctatacttatggctcccaggactatatggttctggttccatttct
tctcctatatgttccatctaagctcttcctcttcttcccttcttttctcc
tctctgtctttctgtcctcctcatctctaaaattcttagcctgtcttcct
tttccaatgctcaaccacaagctctcaacttatcttgtacctgcccttgt
ttttgcttgtatactatttgaaaactatcttctcaaatataatttctcat
tgctaaatagcttgggttggctatgagactataactacttcttcaatcct
gtcagaaatctgagaacaaccaacattatctgaaaatatatgaagcctaa
tacaacttacaaaacttagaataattgaagtgacagctgcctacctatac
atccccagtatttcagaagttggagcacagtcttaagccttctagtccag
gatatactgacagaccttaaaaacaggaattattaaggactagcttcttt
tgccttggcaggactacgttttcctaacccttaactgtgtcctctcagaa
tggtacagtctacaggagaaatagtcaatttttctttagaaggccaccta
gccacatgtacaccctcccctggaggtgggaatgctaagctcctttttga
tctacaatggggatctgtaggagcaattatctcaacaagtaaataataaa
cctaaatacattcgtggaacacgggatctaataaggtatctagactgtgt
ctgctactactgaccatataataagcctggaaaccttacaaaacctggca
tatggcactggctatcagtctaactctgtacgtctaggcacgttgaacgc
a
gaattcaagaccagaagaccatggcaagcctggagatacagctattgcct
ctcagtgggcataggaaaagggcaagagattcaacctgccattcaggcaa
actgtaggagacacagcagaaagcacaacataataccctgagcacaattt
ggtactccacagggtgtcaatacaatacagaaatatataaataaataaca
aaagaggtaaagacagaaaggcacttgcacacacatgtttacagctggac
tactcatagtagccagggcatggaaccagcctagatttttatcagcagat
ggatggattaaaaatgtagtaatgcatttgacttagtgaatagtttccca
attccaagacacttttctatgtagcctaggaaggctaataactatgttgt
tatttctcgtcttaaacttgagcatcctcctgtttcagccttccttgtct
ctagatatgtttatttagcaccatgattggttttgagtccctctctttag
cttttaggtgtctgttttctccatgaatttcatattcttctctatggatc
taactatgtcacaatattttataagaagacgagctacattacattaatac
ctgacctgataagtgatcttcattctaaccgatttacctatttttaaaaa
cctcattatcttaaaagagttatcatcacagatattttaagttgtaactc
cattacatagatttcaggaaaaagcttatgaataattctgaatcacaaag
ccagaaatgggattagttgataattttctgttttcataagataaaagtta
agaataaagtaaatttcttctaccaaagactgaaaaaaaagccattccat
tctgactctaagaaagaggaaatgaatacatataaccaatgttttcaaca
ctatttatggcaaacagtagcacattttataatatttctaaactctttat
tgtgggcactgatgcgatacaaaagctcagttcagtaaagctcatctata
agatgcagactgaaccattgctttgctgccactataaattaactttaaag
cacataaaaggacagattaatggctttcatagcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16601007_16602097
seq2: B6Ng01-152O11.g_71_1156 (reverse)

seq1  TTTGCTAATGAAAGCCATTAATCTGTCCTTTTATGTGCTTTAAAGTTTAT  50
      |||||| |||||||||||||||||||||||||||||||||||||| ||| 
seq2  TTTGCT-ATGAAAGCCATTAATCTGTCCTTTTATGTGCTTTAAAG-TTAA  48

seq1  TTTATAGT-GCAGCAAAGCATTGTGTCAGTCTGCATTCTTATAGATGAGC  99
      |||||||| ||||||||||| ||  |||||||||| ||||||||||||||
seq2  TTTATAGTGGCAGCAAAGCAATGGTTCAGTCTGCA-TCTTATAGATGAGC  97

seq1  TTTTACTGAACTGAGCTTTTGTATCGCATCAGTGCCCAACAATAAAGAGT  149
       |||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  -TTTACTGAACTGAGCTTTTGTATCGCATCAGTGCCC-ACAATAAAGAGT  145

seq1  TTAGAAATATTATAAAATGTGCTACTGTTTGCCATAAATAGTGTTGAAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATATTATAAAATGTGCTACTGTTTGCCATAAATAGTGTTGAAAA  195

seq1  CATTGGTTATATGTATTCATTTTCCTCTTTCTTAGAGTCAGAATGGAATG  249
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CATTGGTTATATGTATTCA-TTTCCTCTTTCTTAGAGTCAGAATGGAATG  244

seq1  GCTTTTTTTTCAGTCTTTGGTAGAAGAAATTTACTTTATTCTTAACTTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTTTTCAGTCTTTGGTAGAAGAAATTTACTTTATTCTTAACTTTT  294

seq1  ATCTTATGAAAACAGAAAATTATCAACTAATCCCATTTCTGGCTTTGTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATGAAAACAGAAAATTATCAACTAATCCCATTTCTGGCTTTGTGA  344

seq1  TTCAGAATTATTCATAAGCTTTTTCCTGAAATCTATGTAATGGAGTTACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAATTATTCATAAGCTTTTTCCTGAAATCTATGTAATGGAGTTACA  394

seq1  ACTTAAAATATCTGTGATGATAACTCTTTTAAGATAATGAGGTTTTTAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAATATCTGTGATGATAACTCTTTTAAGATAATGAGGTTTTTAAA  444

seq1  AATAGGTAAATCGGTTAGAATGAAGATCACTTATCAGGTCAGGTATTAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTAAATCGGTTAGAATGAAGATCACTTATCAGGTCAGGTATTAAT  494

seq1  GTAATGTAGCTCGTCTTCTTATAAAATATTGTGACATAGTTAGATCCATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTAGCTCGTCTTCTTATAAAATATTGTGACATAGTTAGATCCATA  544

seq1  GAGAAGAATATGAAATTCATGGAGAAAACAGACACCTAAAAGCTAAAGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAATATGAAATTCATGGAGAAAACAGACACCTAAAAGCTAAAGAG  594

seq1  AGGGACTCAAAACCAATCATGGTGCTAAATAAACATATCTAGAGACAAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTCAAAACCAATCATGGTGCTAAATAAACATATCTAGAGACAAGG  644

seq1  AAGGCTGAAACAGGAGGATGCTCAAGTTTAAGACGAGAAATAACAACATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGAAACAGGAGGATGCTCAAGTTTAAGACGAGAAATAACAACATA  694

seq1  GTTATTAGCCTTCCTAGGCTACATAGAAAAGTGTCTTGGAATTGGGAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTAGCCTTCCTAGGCTACATAGAAAAGTGTCTTGGAATTGGGAAAC  744

seq1  TATTCACTAAGTCAAATGCATTACTACATTTTTAATCCATCCATCTGCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACTAAGTCAAATGCATTACTACATTTTTAATCCATCCATCTGCTG  794

seq1  ATAAAAATCTAGGCTGGTTCCATGCCCTGGCTACTATGAGTAGTCCAGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATCTAGGCTGGTTCCATGCCCTGGCTACTATGAGTAGTCCAGCT  844

seq1  GTAAACATGTGTGTGCAAGTGCCTTTCTGTCTTTACCTCTTTTGTTATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACATGTGTGTGCAAGTGCCTTTCTGTCTTTACCTCTTTTGTTATTT  894

seq1  ATTTATATATTTCTGTATTGTATTGACACCCTGTGGAGTACCAAATTGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATATTTCTGTATTGTATTGACACCCTGTGGAGTACCAAATTGTG  944

seq1  CTCAGGGTATTATGTTGTGCTTTCTGCTGTGTCTCCTACAGTTTGCCTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGTATTATGTTGTGCTTTCTGCTGTGTCTCCTACAGTTTGCCTGA  994

seq1  ATGGCAGGTTGAATCTCTTGCCCTTTTCCTATGCCCACTGAGAGGCAATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGGTTGAATCTCTTGCCCTTTTCCTATGCCCACTGAGAGGCAATA  1044

seq1  GCTGTATCTCCAGGCTTGCCATGGTCTTCTGGTCTTGAATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATCTCCAGGCTTGCCATGGTCTTCTGGTCTTGAATTC  1086