BAC Information

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BAC

Clone NameB6Ng01-153H09
Chromosome3 (Build37)
Map Location 83,109,321 - 83,110,054
singlet/doubletsinglet
Overlap geneDchs2
Upstream geneMtap9, Npy2r, LOC100041940, EG633285, Lrat, Fgg, Fga, Fgb, Plrg1, EG627094
Downstream gene1700028M03Rik, LOC100042007, LOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik, Mnd1, Trim2, EG624713
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153H09.bB6Ng01-153H09.g
ACCDH948768DH948769
length1,044733
definitionDH948768|Mus musculus domesticus DNA, BAC clone: B6Ng01-153H09, 5' end.DH948769|Mus musculus domesticus DNA, BAC clone: B6Ng01-153H09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttggaagttcttcaaggttcttcttttattatctattcattca
ttcattcattcattcattcattcatttttatagcctgaccacactttctt
ctaggaagttcttcaaggcagttcccttccttccttccttccttccttcc
ttccttccttccttccttccttaatttctctatctatctacttattgtaa
cagctcaactgcaatttctcctcccttcttttgcccagtcccttccttcc
atccacaactcttcctcagtttctctttaggaaaggacaggcctcccaca
gttattaaccagccatatcaagttgcagtaagactaggcacctcctttcc
tacacaaggcaacccagtaggaagaaaaggtcccaaaggctggctggcaa
cagaatcagacacagccactggttccacttataggggtcccccaagaaga
ctaacctacatacacaactgtaacatatgtagagggagaccaggtcaatc
ccatgcatgctccctggttagtgtttcaggtttcattgagcccttacggg
cccaggttaattgattctgtgggttttctttggtgtccttaataccattg
actcctacaatccttccccctgttctgagggattcctaaaactccaccta
acatttggctgtgggtctttgcatctatttccatcaattgctggataaaa
gcctctcataaaaattgaactaggaatatatacaaagagctcaagaagct
gaattccaaaaattcaaataaccccattaaaatagggtacagagctaaaa
caaagaatctcaactgaggaatactgaagggctgagatcacttgaaaaaa
tgttcaacattccttaatcatcaggaatgcaattcataacactctgatat
tcctctcacaccagttagaatggctaggatcaaaattcctgcgacagcaa
atgtctggtgaggatgtggagaaaagaggaacactcctctatggctggtg
ggatgcgagtttggaaaaaccacttcggaatacatctgggagtt
gaattcttgataccgggattgtattagttttctagcactacagtgaaaca
cttgaaccaactagcctattaaacaagacctctcttttgtttagttactc
tgaaagttttaggcaaagctaagtggccctgctgtgttgggtttctggga
gggcagtatcatggtgggatggtagagtaggaatagagtcctctttcaca
tccccaggacccaacagtgagccacaggcttgccaccatttcccagaagt
accatcaccttggtttttcactgagctgttaacatggtagacctttggga
aacatccacatccgaagtataggcatagctaatgttgcccttgtctgaaa
caagatgtcagggtagaatataagaaaccaaaacccacttctaacactgt
gccttcttgcttaacacttgacttaaaaagctaaaggatagacatgtcag
aagtctctatccttctaattccatgttttattaattccttataagattat
ctttttagttctatttaatatttggagttgtaatatttaatatttaatat
tgtaaaagcagctgttagacagcacttaatatcctagtaatgcacttctg
aaattgtacgctttcaaggaagctagttaacacttatgcgggcaatgcag
gcgcctggcatctgtcagtagccaggtgtaatgactgtggacaggcttgt
tctggaagaatacacttgacatggagggtgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_83109321_83110054
seq2: B6Ng01-153H09.g_71_803

seq1  GAATTCTTGATACCGGGATTGTATTAGTTTTCTAGCACTACAGTGAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATACCGGGATTGTATTAGTTTTCTAGCACTACAGTGAAACA  50

seq1  CTTGAACCAACTAGCCTATTAAACAAGACCTCTCTTTTGTTTAGTTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACCAACTAGCCTATTAAACAAGACCTCTCTTTTGTTTAGTTACTC  100

seq1  TGAAAGTTTTAGGCAAAGCTAAGTGGCCCTGCTGTGTTGGGTTTCTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTTTTAGGCAAAGCTAAGTGGCCCTGCTGTGTTGGGTTTCTGGGA  150

seq1  GGGCAGTATCATGGTGGGATGGTAGAGTAGGAATAGAGTCCTCTTTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTATCATGGTGGGATGGTAGAGTAGGAATAGAGTCCTCTTTCACA  200

seq1  TCCCCAGGACCCAACAGTGAGCCACAGGCTTGCCACCATTTCCCAGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGGACCCAACAGTGAGCCACAGGCTTGCCACCATTTCCCAGAAGT  250

seq1  ACCATCACCTTGGTTTTTCACTGAGCTGTTAACATGGTAGACCTTTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCACCTTGGTTTTTCACTGAGCTGTTAACATGGTAGACCTTTGGGA  300

seq1  AACATCCACATCCGAAGTATAGGCATAGCTAATGTTGCCCTTGTCTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCACATCCGAAGTATAGGCATAGCTAATGTTGCCCTTGTCTGAAA  350

seq1  CAAGATGTCAGGGTAGAATATAAGAAACCAAAACCCACTTCTAACACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGTCAGGGTAGAATATAAGAAACCAAAACCCACTTCTAACACTGT  400

seq1  GCCTTCTTGCTTAACACTTGACTTAAAAAGCTAAAGGATAGACATGTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTTGCTTAACACTTGACTTAAAAAGCTAAAGGATAGACATGTCAG  450

seq1  AAGTCTCTATCCTTCTAATTCCATGTTTTATTAATTCCTTATAAGATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTATCCTTCTAATTCCATGTTTTATTAATTCCTTATAAGATTAT  500

seq1  CTTTTTAGTTCTATTTAATATTTGGAGTTGTAATATTTAATATTTAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAGTTCTATTTAATATTTGGAGTTGTAATATTTAATATTTAATAT  550

seq1  TGTAAAAGCAGCTGTTAGACAGCACTTAATATCCTAGTAATGCACTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAGCAGCTGTTAGACAGCACTTAATATCCTAGTAATGCACTTCTG  600

seq1  AAATTGTACGC-TTCAAGGAAGCTAGTTAACACTTATGCGGGCAATGCAG  649
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTACGCTTTCAAGGAAGCTAGTTAACACTTATGCGGGCAATGCAG  650

seq1  GCGCCTGGCATCTGTCAGTAGCCAGGTGTAATGACTTGTGGACAGGCTTG  699
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCGCCTGGCATCTGTCAGTAGCCAGGTGTAATGAC-TGTGGACAGGCTTG  699

seq1  TCCTGGAAGAATACACTTGACATGGGAGGGTGTAT  734
      | ||||||||||||||||||||| |||||||||||
seq2  TTCTGGAAGAATACACTTGACAT-GGAGGGTGTAT  733