BAC Information

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BAC

Clone NameB6Ng01-153I08
Chromosome3 (Build37)
Map Location 134,569,062 - 134,659,458
singlet/doubletdoublet
Overlap geneTacr3, LOC229837
Upstream geneLOC100039168, LOC668862, LOC100039199, Cxxc4, Ppia-ps3_1390.1, LOC100039234
Downstream geneLOC100039290, EG620439, Cenpe, Bdh2, C80638, 4933425K02Rik, Zcd2, Ube2d3, Manba, LOC668745, Nfkb1, ENSMUSG00000045520, Slc39a8, LOC100039350
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153I08.bB6Ng01-153I08.g
ACCDH948810DH948811
length1,064935
definitionDH948810|Mus musculus domesticus DNA, BAC clone: B6Ng01-153I08, 5' end.DH948811|Mus musculus domesticus DNA, BAC clone: B6Ng01-153I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,569,062 - 134,570,145)(134,658,524 - 134,659,458)
sequence
gaattctttctcacacattacagaaaaaaagaagtttctttctttctagc
attgcttatattgagaaaaaaacagacgtgaaagtttctaaaaatatgta
cattgaatcacacatactttggagcatacataaattattttgacacaata
tcacattttacaaaagtaaattggtgctttaaaatgatcatttgtgcaga
tttctgagatagagtacagtgaacaatgcagataagtaacaattcttctc
tattagcaacataccaaaaatccaaccaatagcatgctgaagctgtactt
tgttacctattacaccgtgcagttgcctgtgtaacctgtatcttatcacc
tcctttagaaggagcccaatctgtgacttttggtttcttataaatatata
atatgggtaaattcagagttttgtacaatttctgttcattcatcaactac
tatgttgagaatactctacatgctatcaatttttctagacataccgagag
cacgttattaagaaacatgatgacatcagatggaataacccccaatcttt
tcattgcatcatccacaaatctacccacttatgccctctaatctacgttc
accaatcccattacagtgaggaatacctggtctcaataaaactgtaaatg
gctttcaaacttaatttcttcgtaaacatggaagcccagttttacttcag
gacctgtagactgatcacagtgttggtcgagtattgttcaagatgacgaa
ttttagaaaattatcctttgattccatttcccttcctctattataggcaa
acaaactcacagtcgtttgcatgtggatccctttgtccctcttattcagt
tgtcatcttgtcatcgtggaaactgtacgttcttctctaacaatagcttg
actgacattctacaaggttgaaagtgtctgtcctacaggaaaatgaacct
ctatactgactttctaggttgcagttctttctagcagccttgttactcct
gtattcttcactcttcctcatctcatcaagaactgaactacggaggagtc
gagcagagctcact
gaattctttggcgttttaaagacaaaaagtagcaacatagccatgtctaa
ttttaaaaggatcctcagtgtggcttagcatgtgctgtctaaatcttagg
acaaaatttcttaaattagctagaaaaaggcaaccataacttagtcactt
tttaaaaaatctggacaaatttattcacttagtgttaattcattgaagac
atttagaaaatttatttcagtgacaccttcactaacaaattattttttaa
aataaaataaaagcaaggccattatacagaataacttagaatatgataca
gtatcaaacagcaattatttcctaataaatacccttctcttcctaaaaaa
aaaaacctttcattatcttaacagtttgagtttcattctcttgctataga
ttataaatggtgagagtaacgtatctatcattaccctccctcgcccccat
gcactgaacccactaatctgattttcatacagttttaatttagagtgtta
tagaattattttataacaagatgcagagagttccaggcgtatggttctat
ttactaattatattttaacaccttagaattaaaagccattttatcagttt
catgttttataattaagaaaaatataaagccctgccagttgtcataaaaa
ctttatcatttaccgacactcccagatgtctcacaactttgatatcactt
ctgctgttgctgcttattcttgccactggacccttccttacctttctgga
tttagttgatgagtttgtagtctttctgtaaatcgttttattctctaaac
acagtttcttaataaaccaactgttaaaaatgaagccactagttttgatt
gctaccacagagttatcccaatcccagaaaggtagttaaacttgatcaat
gattgataacctccatcactagacatcaggctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_134569062_134570145
seq2: B6Ng01-153I08.b_42_1105

seq1  GAATTCTTTCTCACACATTACAGAAAAAAAGAAGTTTCTTTCTTTCTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCACACATTACAGAAAAAAAGAAGTTTCTTTCTTTCTAGC  50

seq1  ATTGCTTATATTGAGAAAAAAACAGACGTGAAAGTTTCTAAAAATATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTATATTGAGAAAAAAACAGACGTGAAAGTTTCTAAAAATATGTA  100

seq1  CATTGAATCACACATACTTTGGAGCATACATAAATTATTTTGACACAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAATCACACATACTTTGGAGCATACATAAATTATTTTGACACAATA  150

seq1  TCACATTTTACAAAAGTAAATTGGTGCTTTAAAATGATCATTTGTGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTTACAAAAGTAAATTGGTGCTTTAAAATGATCATTTGTGCAGA  200

seq1  TTTCTGAGATAGAGTACAGTGAACAATGCAGATAAGTAACAATTCTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGATAGAGTACAGTGAACAATGCAGATAAGTAACAATTCTTCTC  250

seq1  TATTAGCAACATACCAAAAATCCAACCAATAGCATGCTGAAGCTGTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCAACATACCAAAAATCCAACCAATAGCATGCTGAAGCTGTACTT  300

seq1  TGTTACCTATTACACCGTGCAGTTGCCTGTGTAACCTGTATCTTATCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCTATTACACCGTGCAGTTGCCTGTGTAACCTGTATCTTATCACC  350

seq1  TCCTTTAGAAGGAGCCCAATCTGTGACTTTTGGTTTCTTATAAATATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAGAAGGAGCCCAATCTGTGACTTTTGGTTTCTTATAAATATATA  400

seq1  ATATGGGTAAATTCAGAGTTTTGTACAATTTCTGTTCATTCATCAACTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGTAAATTCAGAGTTTTGTACAATTTCTGTTCATTCATCAACTAC  450

seq1  TATGTTGAGAATACTCTACATGCTATCAATTTTTCTAGACATACCGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGAGAATACTCTACATGCTATCAATTTTTCTAGACATACCGAGAG  500

seq1  CACGTTATTAAGAAACATGATGACATCAGATGGAATAACCCCCAATCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTATTAAGAAACATGATGACATCAGATGGAATAACCCCCAATCTTT  550

seq1  TCATTGCATCATCCACAAATCTACCCACTTATGCCCTCTAATCTACGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCATCATCCACAAATCTACCCACTTATGCCCTCTAATCTACGTTC  600

seq1  ACCAATCCCATTACAGTGAGGAATACCTGGTCTCAATAAAACTGTAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCCCATTACAGTGAGGAATACCTGGTCTCAATAAAACTGTAAATG  650

seq1  GCTTTCAAACTTAATTTCTTCGTAAACATGGAAGCCCAGTTTTACTTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAAACTTAATTTCTTCGTAAACATGGAAGCCCAGTTTTACTTCAG  700

seq1  GACCTGTAGACTGATCACAGTGTTGGTCGAGTATTGTTCAAGATGACGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTAGACTGATCACAGTGTTGGTCGAGTATTGTTCAAGATGACGAA  750

seq1  TTTTAGAAAATTATCCTTTGATTCCATTTCCCTTCCTCTATTATAGGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAAAATTATCCTTTGATTCCATTTCCCTTCCTCTATTATAGGCAA  800

seq1  ACAAACTCACAGTCGTTTGCATGTGGATCCCTTTGTCCCTCTTATTCAGG  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACAAACTCACAGTCGTTTGCATGTGGATCCCTTTGTCCCTCTTATTCA-G  849

seq1  TTGTCATCTTGTCATCGTGGAAACTGTACGTTCTTCTCTAACAATAGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATCTTGTCATCGTGGAAACTGTACGTTCTTCTCTAACAATAGCTT  899

seq1  GACTGACATTCTACAAGGTTGACAGTGTTCTGTCCTACAGGAAAATGAAC  950
      |||||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  GACTGACATTCTACAAGGTTGAAAGTG-TCTGTCCTACAGGAAAATGAAC  948

seq1  CTCTTATACTGACTTTCTTAGGTTGCAGTTTCTTTCTAGGCAGCCTTTGT  1000
      ||| ||||||||||||| |||||||||| ||||||||| |||||| ||||
seq2  CTC-TATACTGACTTTC-TAGGTTGCAG-TTCTTTCTA-GCAGCC-TTGT  993

seq1  TACTTCCTTGTATTCTTTCAACTCTTTCCCTCAATCTTCCATCCAAAGAA  1050
      ||||  | |||||||||   ||||||  |||| ||||  ||||  |||||
seq2  TACT--CCTGTATTCTT--CACTCTT--CCTC-ATCT--CATC--AAGAA  1032

seq1  CTGAACTACTGAGGAGTCAGAGCAGAGTCTCACT  1084
      ||||||||| |||||||| |||||||| ||||||
seq2  CTGAACTACGGAGGAGTC-GAGCAGAG-CTCACT  1064

seq1: chr3_134658524_134659458
seq2: B6Ng01-153I08.g_70_1004 (reverse)

seq1  GGGAGCACTGATGTCTAGTGATGGAGTTTATCACTCATTGATCAAGTTTA  50
      |||||| ||||||||||||||||||| |||||| ||||||||||||||| 
seq2  GGGAGC-CTGATGTCTAGTGATGGAGGTTATCAATCATTGATCAAGTTT-  48

seq1  AACTACCTTTCTGGGAATTGGATAACTCTGTGGTAGCATTCAAAAACTAG  100
      |||||||||||||||| | ||||||||||||||||||| || ||||||||
seq2  AACTACCTTTCTGGGATTGGGATAACTCTGTGGTAGCAATC-AAAACTAG  97

seq1  TGGCTTCATTTTTTAACAGTTGGTTTTATTAAGAAACTGTGTTTAGAGAA  150
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  TGGCTTCA-TTTTTAACAGTTGG-TTTATTAAGAAACTGTGTTTAGAGAA  145

seq1  TAAAACGA-TTACAGAAAGACTAACAAACTCATCAACTAAATCCAG-AAG  198
      |||||||| ||||||||||||| ||||||||||||||||||||||| |||
seq2  TAAAACGATTTACAGAAAGACT-ACAAACTCATCAACTAAATCCAGAAAG  194

seq1  GTAAGGAAGGGTCCAGTGGCAAGAATAAGCAGCAACAGCAGAAGTGATAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGAAGGGTCCAGTGGCAAGAATAAGCAGCAACAGCAGAAGTGATAT  244

seq1  C-AAGTTGTGAGACATCTGGGAGTGTCGGTAAATGAT-AAGTTTTTATGA  296
      | ||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAAAGTTGTGAGACATCTGGGAGTGTCGGTAAATGATAAAGTTTTTATGA  294

seq1  CAACTGGCAGGGCTTT-TATTTTTCTTAATTAT-AAACATGAAACTGATA  344
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  CAACTGGCAGGGCTTTATATTTTTCTTAATTATAAAACATGAAACTGATA  344

seq1  AAATGGCTTTTAATTCTAAGGTATTAAAATATAATTAGTAAATAGAACCA  394
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAATGGCTTTTAATTCTAAGGTGTTAAAATATAATTAGTAAATAGAACCA  394

seq1  TACGCCTGGAACTCTCTGCATCTTGTTATAAAATAATTCTATAACACTCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCCTGGAACTCTCTGCATCTTGTTATAAAATAATTCTATAACACTCT  444

seq1  AAATTAAAACTGTATGAAAATCAGATTAGTGGGTTCAGTGCATGGGGGCG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAACTGTATGAAAATCAGATTAGTGGGTTCAGTGCATGGGGGCG  494

seq1  AGGGAGGGTAATGATAGATACGTTACTCTCACCATTTATAATCTATAGCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGTAATGATAGATACGTTACTCTCACCATTTATAATCTATAGCA  544

seq1  AGAGAATGAAACTCAAACTGTTAAGATAATGAAAGGTTTTTTTTTTTAGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGAAACTCAAACTGTTAAGATAATGAAAGGTTTTTTTTTTTAGG  594

seq1  AAGAGAAGGGTATTTATTAGGAAATAATTGCTGTTTGATACTGTATCATA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGGGTATTTATTAGGAAATAATTGCTGTTTGATACTGTATCATA  644

seq1  TTCTAAGTTATTCTGTATAATGGCCTTGCTTTTATTTTATTTTAAAAAAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGTTATTCTGTATAATGGCCTTGCTTTTATTTTATTTTAAAAAAT  694

seq1  AATTTGTTAGTGAAGGTGTCACTGAAATAAATTTTCTAAATGTCTTCAAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTAGTGAAGGTGTCACTGAAATAAATTTTCTAAATGTCTTCAAT  744

seq1  GAATTAACACTAAGTGAATAAATTTGTCCAGATTTTTTAAAAAGTGACTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAACACTAAGTGAATAAATTTGTCCAGATTTTTTAAAAAGTGACTA  794

seq1  AGTTATGGTTGCCTTTTTCTAGCTAATTTAAGAAATTTTGTCCTAAGATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGGTTGCCTTTTTCTAGCTAATTTAAGAAATTTTGTCCTAAGATT  844

seq1  TAGACAGCACATGCTAAGCCACACTGAGGATCCTTTTAAAATTAGACATG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGCACATGCTAAGCCACACTGAGGATCCTTTTAAAATTAGACATG  894

seq1  GCTATGTTGCTACTTTTTGTCTTTAAAACGCCAAAGAATTC  935
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTTGCTACTTTTTGTCTTTAAAACGCCAAAGAATTC  935