BAC Information

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BAC

Clone NameB6Ng01-153N11
Chromosome3 (Build37)
Map Location 66,688,382 - 66,689,054
singlet/doubletsinglet
Overlap genenone
Upstream geneCcnl1, LOC625048, Veph1, Tpi-rs2, Ptx3, LOC625115
Downstream geneShox2, Rsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153N11.bB6Ng01-153N11.g
ACCDH949040DH949041
length1,260898
definitionDH949040|Mus musculus domesticus DNA, BAC clone: B6Ng01-153N11, 5' end.DH949041|Mus musculus domesticus DNA, BAC clone: B6Ng01-153N11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttccagattttcaaaaaagagctaatactaatactttttaaact
attccacaaaaattagaaatagaaggaatattgccaatcttattcaatgg
gcccacagtcaccctcataaaacctaaaccacacaacgacataacaaaga
aagagaatttgagactgatttcccttagaaacactgatataataatgctc
aaaaaataataataatactcgcaaaccaaatccaagaacacaccaaaaat
atcatccaatatgtccaatgcaggggtggttcgatatacaaaaatccatc
aacataatccactatataaacaaactgaaagaaaaaaccacatgatcatc
tcatgtgatgctgaaaaagcctttgacaaaatctaacacttcctgttaaa
agttttagagagatcagggattcaaggcacatacctaaatataataaatg
caatatacagcaagccaatagccaacatcaagctaaatggagagaatttg
aagtaattcctttaaaatcaaagacaagactatacacacactcctctatt
tatttaaactcaaaaaaatcaatagccctcctctatacaaacaataaatg
atctgggaaagaaatcagagaaacaacaccctttacaatagccacaaata
atataaaatatcttggtgtacttctaaccaagcaagggaaagacctgtat
gacaagtacgtcaagtctctgaagaagatatcagaagatagagagatctc
ccattctcatggattgacaggattaatatagtaaaaatgaccatctttcc
aacagcaatctacatagtcaatgcaatccccatcaaaattccaaaacaat
tttttacagaccttgacagaacaattctacctttatatggaaagcaaaaa
caagatagcaaaacaatcctgtacaatacgacaatcaatcctcagaacta
cataattttcttcaaagaatgatgtctctgtgcacaattgctttttaatg
gtgctacctataaaagaaggatcatttcttaatactgttactttggggac
aaacttctagcatgtaacctttgggagacaaatcacattggaccatagct
aatgaagctttccctcaacatgcccagcatacactaatctcacgtctata
tctagagcatgtttaggttaatccaggcaggtcattgcatggcatgatag
tttgtcactgcatacagaactatgaatgaaagtgtgactcatcgcgatga
atgatccgta
gaattcacctctcaatcctcatcagagagatgtttattcacaggagatgg
taattaacatagagacccacaactagccaagggtccaagaccaggagatg
gtggaatgtcccacttagtgctataacacaccccttcctccaaaggcccg
aggatcactgtggaagaaggagaggaaaacatgtaaggtccagaggccac
aggttactacaaggaagcagtgtgttctagacacagcaaagtagctccac
acatgaactcgtgatgacagcatgcatagatctatgtcaactcaaaccag
accaaatcccagcacagaagggagcggaggcagaaagtcccaacccttcc
tgggaagaagatattagcaatcgatagccactgggagggtgttagtttcc
tttaagagtgtagcctttacagagacttcactagcagtcatggagcctcc
atgggtctgaccaaggccctctgcatatgtcacagttgtgtagcttgatg
ctattgtgggattcctaatagcgggagtaggagctgctcctgcctccttt
tcctgcttttgagaccacttttctcctgctggattgccttgttcagcctt
aataatgggggaagagactggttggattgcaacttgttatgccatgtttg
gttgatatcctgggaaatctgcccttttcctttctttttcttctcttttc
tttccctttccttctcttttcatgtgtatatgtgtgttctgtgtgttatt
tctgctgttgtgtgttttgtttgggactttgtttgtttgtttacttattc
acattgcatctcactcactgtccccctcccagtggttacccatcccacaa
ttctcgctccccttctccactgagagggtaggtatcaccctgggtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_66688382_66689054
seq2: B6Ng01-153N11.g_292_964

seq1  TCTAGACACAGCAAAGTAGCTCCACACATGAACTCGTGATGACAGCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACACAGCAAAGTAGCTCCACACATGAACTCGTGATGACAGCATGC  50

seq1  ATAGATCTATGTCAACTCAAACCAGACCAAATCCCAGCACAGAAGGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCTATGTCAACTCAAACCAGACCAAATCCCAGCACAGAAGGGAGC  100

seq1  GGAGGCAGAAAGTCCCAACCCTTCCTGGGAAGAAGATATTAGCAATCGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGAAAGTCCCAACCCTTCCTGGGAAGAAGATATTAGCAATCGAT  150

seq1  AGCCACTGGGAGGGTGTTAGTTTCCTTTAAGAGTGTAGCCTTTACAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTGGGAGGGTGTTAGTTTCCTTTAAGAGTGTAGCCTTTACAGAGA  200

seq1  CTTCACTAGCAGTCATGGAGCCTCCATGGGTCTGACCAAGGCCCTCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTAGCAGTCATGGAGCCTCCATGGGTCTGACCAAGGCCCTCTGCA  250

seq1  TATGTCACAGTTGTGTAGCTTGATGCTATTGTGGGATTCCTAATAGCGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCACAGTTGTGTAGCTTGATGCTATTGTGGGATTCCTAATAGCGGG  300

seq1  AGTAGGAGCTGCTCCTGCCTCCTTTTCCTGCTTTTGAGACCACTTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAGCTGCTCCTGCCTCCTTTTCCTGCTTTTGAGACCACTTTTCTC  350

seq1  CTGCTGGATTGCCTTGTTCAGCCTTAATAATGGGGGAAGAGACTGGTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGATTGCCTTGTTCAGCCTTAATAATGGGGGAAGAGACTGGTTGG  400

seq1  ATTGCAACTTGTTATGCCATGTTTGGTTGATATCCTGGGAAATCTGCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAACTTGTTATGCCATGTTTGGTTGATATCCTGGGAAATCTGCCCT  450

seq1  TTTCCTTTC-TTTTCTTCTCTTTTCTTTCCCTTTCCTTCTCTTTTCATGT  499
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTCTTTTTCTTCTCTTTTCTTTCCCTTTCCTTCTCTTTTCATGT  500

seq1  GTATATGTGTGTTCTGTGTGTTATTTCTGCTGTTGTGTGTTTTGTTTGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGTGTGTTCTGTGTGTTATTTCTGCTGTTGTGTGTTTTGTTTGGG  550

seq1  ACTTTGTTTGTTTGTTTACTTATTCACATTGCATCTCACTCACTGTCCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTTTGTTTGTTTACTTATTCACATTGCATCTCACTCACTGTCCCC  600

seq1  CTCCCAGTGGTTAACCCATCCCACAATTCTCGCTCCCCTTCTCCACTGAG  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGTGGTT-ACCCATCCCACAATTCTCGCTCCCCTTCTCCACTGAG  649

seq1  AGGGTAGGGATCACCCTGGGTATC  673
      |||||||| |||||||||||||||
seq2  AGGGTAGGTATCACCCTGGGTATC  673