BAC Information

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BAC

Clone NameB6Ng01-154B20
Chromosome3 (Build37)
Map Location 158,041,359 - 158,041,869
singlet/doubletsinglet
Overlap geneLrrc7
Upstream geneLOC546818, Zranb2, Ptger3, LOC433686, LOC624684, Cth, Ankrd13c, Sfrs11, Lrrc40
Downstream geneLOC100041008, LOC668905
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154B20.bB6Ng01-154B20.g
ACCDH949247DH949248
length447505
definitionDH949247|Mus musculus domesticus DNA, BAC clone: B6Ng01-154B20, 5' end.DH949248|Mus musculus domesticus DNA, BAC clone: B6Ng01-154B20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atcccatacaccaaacccgaatgctattgtggatgccaggaagtgcttcc
tgacaggagcctggtatggctgtctccttagaagctctgccagagactga
caaatactgaggtagatgctcgcagccaaccattggactaagtgtggggt
catgatggaggagttggagaagggactgaaggagctgagggactttgcag
ccacagggagggagcaatagtgtcaactggcaagatacacacagcccccc
ccccatccccggagctctgaggactggaccaccaaaccaaagaatacaca
tggagggacccatgactctggccacatatgtggcagagaatggccttgtt
ggatatcagtggcaggagaggccctcaggcctgagggtattccatgcccc
agtgtaggggaatgccagagagggaaggtgggtgttgggggatgggt

tgtatttttctctttgagtgtctactccagttaagtgtttttaattgtgc
ttgcctttctttttgcacaattaaaatttcactaaatcatccaagaaaaa
ttcagatcggaaagtctgtagcagaacatgctgtctggatctttatttta
aatggtttgctttggggatttttgctatcattcatttgttttatagcgtt
ggggtttgagttagtcatacattcggaatttgcactggccagaatgtgct
cttctctcaacaaaatcagtgcaaactatcctccaaaataacagaacact
gctaattattaaatgtgtgtgttctctgtgacaccactattttcagtcct
ttaatttttgagattaaattagatttattatgaactttatcgctttcagt
gattttaaaaaaatatttaattaaaaataagtcttacatctatagtggtg
actagtgatgtaagggaagagaaaaagggaaatgggtatgtgtgtgtgtg
ggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_158041359_158041869
seq2: B6Ng01-154B20.g_64_574

seq1  GAATTCTGTATTTTTCTCTTTGAGTGTCTACTCCAGTTAAGTGTTTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATTTTTCTCTTTGAGTGTCTACTCCAGTTAAGTGTTTTTAA  50

seq1  TTGTGCTTGCCTTTCTTTTTGCACAATTAAAATTTCACTAAATCATCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTTGCCTTTCTTTTTGCACAATTAAAATTTCACTAAATCATCCAA  100

seq1  GAAAAATTCAGATCGGAAAGTCTGTAGCAGAACATGCTGTCTGGATCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTCAGATCGGAAAGTCTGTAGCAGAACATGCTGTCTGGATCTTT  150

seq1  ATTTTAAATGGTTTGCTTTGGGGATTTTTGCTATCATTCATTTGTTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAATGGTTTGCTTTGGGGATTTTTGCTATCATTCATTTGTTTTAT  200

seq1  AGCGTTGGGGTTTGAGTTAGTCATACATTCGGAATTTGCACTGGCCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTTGGGGTTTGAGTTAGTCATACATTCGGAATTTGCACTGGCCAGAA  250

seq1  TGTGCTCTTCTCTCAACAAAATCAGTGCAAACTATCCTCCAAAATAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCTTCTCTCAACAAAATCAGTGCAAACTATCCTCCAAAATAACAG  300

seq1  AACACTGCTAATTATTAAATGTGTGTGTTCTCTGTGACACCACTATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGCTAATTATTAAATGTGTGTGTTCTCTGTGACACCACTATTTTC  350

seq1  AGTCCTTTAATTTTTGAGATTAAATTAGATTTATTATGAACTTTATCGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTTAATTTTTGAGATTAAATTAGATTTATTATGAACTTTATCGCT  400

seq1  TTCAGTGATTTTAAAAAAATATTTAATTAAAAATAAGTCTTACATCTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGATTTTAAAAAAATATTTAATTAAAAATAAGTCTTACATCTATA  450

seq1  GTGGTGACTAGTGATGTAAGGGAAGAGAAAAAGGGAAATGGGTATGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGACTAGTGATGTAAGGGAAGAGAAAAAGGGAAATGGGTATGTGTG  500

seq1  TGTGTGGGGGG  511
      |||||||||||
seq2  TGTGTGGGGGG  511


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