BAC Information

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BAC

Clone NameB6Ng01-154G19
Chromosome3 (Build37)
Map Location 56,755,480 - 56,893,664
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040139
Downstream geneLOC666585, Tm4sf1, LOC383862, Tm4sf4, Wwtr1, Commd2, Gm410, EG623114, Rnf13, LOC675537, Pfn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154G19.bB6Ng01-154G19.g
ACCDH949472DH949473
length8811,117
definitionDH949472|Mus musculus domesticus DNA, BAC clone: B6Ng01-154G19, 5' end.DH949473|Mus musculus domesticus DNA, BAC clone: B6Ng01-154G19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,892,787 - 56,893,664)(56,755,480 - 56,756,610)
sequence
gaattctctgggtgtcttctagggactgctagaaaggcgcttgaaggttg
aagttcgaaggatatgactgcatgtcagtgtcacagagtgggcatacaat
ccgacagtgtggccatccagtgtgacagtgtggccatccagtatggcagt
gtagacatccagtgtgatagtatggtcatccaatatgatagtgtgggcat
ccagtgtgacagtgtgggcatccagtgtgacagtgtgggcatccaatatg
gcagtgtgggcattcagtgtcatagtatggacatcggtgtgacagtgtgg
acattcagtatgaccatgtgggtatccaatgtgaccattgggcatccaga
gttgtacatgcttcctttacttgcctctgaactgcttttcttgtttgacc
tcttttgtggtcgtccctcaatatgacaagcttaagaaaatgaggctttc
ttttcttttcttttcttttcttttcttttcttttctttccttttctttcc
ttttcttttttcttccctccctccatcccctgcctccctccctccctccc
tccctccttctctctctctctctctctttctttctttctttctttctttc
tttctttctttctttctttctttttctttcttctctcttttttccacaga
ctgagtaccccatatttcaaaaattcttggtggaagagttggtttggatt
ggagattttactttgaaatatttgaatacatgtgagaaaacactgggata
ggatccaattctaaacatgaaattcatttagactgccccctgaaggtcat
ttttcccactatttctggttcatctccatttcctttgcgatctatcacat
gacagcaaggagctgatttgacatttatgac
gaattctcctggtctgcctggcttttcacccagcagagaacaatttacag
attgagtttacttgaaaaaaaaatcttatctgtacagcagttattgactg
tgctatcttgctttccgtgatgtatgatttctttttgagaaagtcccagt
ggctgcagaagatgtagacattgccatttaactacttcttgcccagggcc
tgtggggtttgcatctttattaatgatatctttattaagttttattctca
gtgttattgaggaagattttaaggttttgaggtaagtgcactttacttca
agtctttgtttactggaaacctttaactcatccacagtatattgaatatg
taccatgtgctaggcactacaaactggagacacaaaggccataaagaaat
aagttacaggattggagagttggataagagcactcactacttttatggag
gaactggtattggttcccaatacccacattgtggcttactaacatttata
attccattcccaagggatctgatgccctcttcccacctcttcaggtacct
gacatgcatgtagtgcatacacatgacaggagataaaacactacatatgg
agaattaatgtaagtaaatcaacataataaaaagaaagaaattataaacc
aatacaagacaagaaaagaaaagtagccagctgacaagcaggatacatgt
cataaataaaagcattttgggcttcaggcatctaattcagatagccactt
ctctacggagtagtggtataatttttttcatgatatttttactgtctata
ggtcttagccattactaaatatacagtttggtagttttaaggacattcac
atcagagtgtataagataaagagtggatatttggcatccatttttagatt
cttaagatttctagatattgaatactgtgtttacttggaatgatactgtc
tgcctgattatccaatgtttatttttctacatatttgctaaatgaaaaat
gactatttagtcaactaatgacattatttaccaatttaaataaatttcca
ccttaccccattctttccaccatctgatggctcatcctaatggcttaagc
ttttctgcttgccatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_56892787_56893664
seq2: B6Ng01-154G19.b_44_924 (reverse)

seq1  GTCATAAATGTCAAATCAGCTCC-TGCTGTCATGTGATAGATCGCAAAGG  49
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTCATAAATGTCAAATCAGCTCCTTGCTGTCATGTGATAGATCGCAAAGG  50

seq1  AAATGGAGATGAACCAGAAATAGTGTGGAAAATGACCTTCAGGGGGCAAG  99
      ||||||||||||||||||||||||| | ||||||||||||||||||| ||
seq2  AAATGGAGATGAACCAGAAATAGTGGGAAAAATGACCTTCAGGGGGC-AG  99

seq1  TCTAAATGAATTTCATGTTTAGACTTGGATCCTATCCCAGTGTTTTCTCA  149
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCTAAATGAATTTCATGTTTAGAATTGGATCCTATCCCAGTGTTTTCTCA  149

seq1  CATGTATTCAAATATTTCAAAGTAAAATCTCCAATCCAAACCAACTCTTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTCAAATATTTCAAAGTAAAATCTCCAATCCAAACCAACTCTTC  199

seq1  CACCAAGAATTTT--GAATATGGGGTACTCAGTCTGTGGAAAAAAGAGAG  247
      |||||||||||||   ||||||||||||||||||||||||||||||||||
seq2  CACCAAGAATTTTTGAAATATGGGGTACTCAGTCTGTGGAAAAAAGAGAG  249

seq1  AAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  299

seq1  AAGAAAGAGAGAGAGAGAGAGAGAAGGAGGGAGGGAGGGAGGGAGGGAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAGAGAGAGAGAGAGAGAAGGAGGGAGGGAGGGAGGGAGGGAGG  349

seq1  CAGGGGATGGAGGGAGGGAAGAAAAAAGAAAAGGAAAGAAAAGGAAAGAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGATGGAGGGAGGGAAGAAAAAAGAAAAGGAAAGAAAAGGAAAGAA  399

seq1  AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGCCTCATTTTCTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGCCTCATTTTCTTA  449

seq1  AGCTTGTCATATTGAGGGACGACCACAAAAGAGGTCAAACAAGAAAAGCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTCATATTGAGGGACGACCACAAAAGAGGTCAAACAAGAAAAGCA  499

seq1  GTTCAGAGGCAAGTAAAGGAAGCATGTACAACTCTGGATGCCCAATGGTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAGGCAAGTAAAGGAAGCATGTACAACTCTGGATGCCCAATGGTC  549

seq1  ACATTGGATACCCACATGGTCATACTGAATGTCCACACTGTCACACCGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGATACCCACATGGTCATACTGAATGTCCACACTGTCACACCGAT  599

seq1  GTCCATACTATGACACTGAATGCCCACACTGCCATATTGGATGCCCACAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATACTATGACACTGAATGCCCACACTGCCATATTGGATGCCCACAC  649

seq1  TGTCACACTGGATGCCCACACTGTCACACTGGATGCCCACACTATCATAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACACTGGATGCCCACACTGTCACACTGGATGCCCACACTATCATAT  699

seq1  TGGATGACCATACTATCACACTGGATGTCTACACTGCCATACTGGATGGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGACCATACTATCACACTGGATGTCTACACTGCCATACTGGATGGC  749

seq1  CACACTGTCACACTGGATGGCCACACTGTCGGATTGTATGCCCACTCTGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTCACACTGGATGGCCACACTGTCGGATTGTATGCCCACTCTGT  799

seq1  GACACTGACATGCAGTCATATCCTTCGAACTTCAACCTTCAAGCGCCTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGACATGCAGTCATATCCTTCGAACTTCAACCTTCAAGCGCCTTT  849

seq1  CT-CCAGTCCCTAGAAGACACCCAGAGAATTC  878
      ||  ||||||||||||||||||||||||||||
seq2  CTAGCAGTCCCTAGAAGACACCCAGAGAATTC  881

seq1: chr3_56755480_56756610
seq2: B6Ng01-154G19.g_66_1182

seq1  GAATTCTCCTGGTCTGCCTGGCTTTTCACCCAGCAGAGAACAATTTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGGTCTGCCTGGCTTTTCACCCAGCAGAGAACAATTTACAG  50

seq1  ATTGAGTTTACTTGAAAAAAAAATCTTATCTGTACAGCAGTTATTGACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTTTACTTGAAAAAAAAATCTTATCTGTACAGCAGTTATTGACTG  100

seq1  TGCTATCTTGCTTTCCGTGATGTATGATTTCTTTTTGAGAAAGTCCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCTTGCTTTCCGTGATGTATGATTTCTTTTTGAGAAAGTCCCAGT  150

seq1  GGCTGCAGAAGATGTAGACATTGCCATTTAACTACTTCTTGCCCAGGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAGAAGATGTAGACATTGCCATTTAACTACTTCTTGCCCAGGGCC  200

seq1  TGTGGGGTTTGCATCTTTATTAATGATATCTTTATTAAGTTTTATTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGTTTGCATCTTTATTAATGATATCTTTATTAAGTTTTATTCTCA  250

seq1  GTGTTATTGAGGAAGATTTTAAGGTTTTGAGGTAAGTGCACTTTACTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATTGAGGAAGATTTTAAGGTTTTGAGGTAAGTGCACTTTACTTCA  300

seq1  AGTCTTTGTTTACTGGAAACCTTTAACTCATCCACAGTATATTGAATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTGTTTACTGGAAACCTTTAACTCATCCACAGTATATTGAATATG  350

seq1  TACCATGTGCTAGGCACTACAAACTGGAGACACAAAGGCCATAAAGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGTGCTAGGCACTACAAACTGGAGACACAAAGGCCATAAAGAAAT  400

seq1  AAGTTACAGGATTGGAGAGTTGGATAAGAGCACTCACTACTTTTATGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACAGGATTGGAGAGTTGGATAAGAGCACTCACTACTTTTATGGAG  450

seq1  GAACTGGTATTGGTTCCCAATACCCACATTGTGGCTTACTAACATTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGTATTGGTTCCCAATACCCACATTGTGGCTTACTAACATTTATA  500

seq1  ATTCCATTCCCAAGGGATCTGATGCCCTCTTCCCACCTCTTCAGGTACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTCCCAAGGGATCTGATGCCCTCTTCCCACCTCTTCAGGTACCT  550

seq1  GACATGCATGTAGTGCATACACATGACAGGAGATAAAACACTACATATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCATGTAGTGCATACACATGACAGGAGATAAAACACTACATATGG  600

seq1  AGAATTAATGTAAGTAAATCAACATAATAAAAAGAAAGAAATTATAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAATGTAAGTAAATCAACATAATAAAAAGAAAGAAATTATAAACC  650

seq1  AATACAAGACAAGAAAAGAAAAGTAGCCAGCTGACAAGCAGGATACATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAGACAAGAAAAGAAAAGTAGCCAGCTGACAAGCAGGATACATGT  700

seq1  CATAAATAAAAGCATTTTGGGCTTCAGGCATCTAATTCAGATAGCCACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATAAAAGCATTTTGGGCTTCAGGCATCTAATTCAGATAGCCACTT  750

seq1  CTCTACGGAGTAGTGGTATAATTTTTTTCATGATATTTTTACTGTCTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACGGAGTAGTGGTATAATTTTTTTCATGATATTTTTACTGTCTATA  800

seq1  GGTCTTAGCCATTACTAAATATACAGTTTGGTAGTTTTAAGGACATTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTAGCCATTACTAAATATACAGTTTGGTAGTTTTAAGGACATTCAC  850

seq1  ATCAGAGTGTATAAGATAAAGAGTGGATATTTGGCATCCATTTTTAGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGTGTATAAGATAAAGAGTGGATATTTGGCATCCATTTTTAGATT  900

seq1  CTTAAGATTTCTAGATATTGAATACTGTGTTTACTTGGAATGATACTGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGATTTCTAGATATTGAATACTGTGTTTACTTGGAATGATACTGTC  950

seq1  TGCCTGATTATCCAATGTTTATTTTTCTTACATATTTTGCTAAATGAAAA  1000
      ||||||||||||||||||||||||||| |||||| |||||||||||||||
seq2  TGCCTGATTATCCAATGTTTATTTTTC-TACATA-TTTGCTAAATGAAAA  998

seq1  ATGACTATTTTAGTCAACTAATGACATTTATTTACCAATTTGTAAATAAA  1050
      ||||||| |||||||||||||||||| |||||||||||||  ||||||||
seq2  ATGACTA-TTTAGTCAACTAATGACA-TTATTTACCAATT--TAAATAAA  1044

seq1  TTTCACACTTTACCCCCATGTCTTT-CAACATCTGATGCCTCATCTCTAA  1099
      |||| ||| ||| |||||| ||||| || ||||||||| |||||| ||  
seq2  TTTC-CACCTTA-CCCCAT-TCTTTCCACCATCTGATGGCTCATC-CT--  1088

seq1  AATGGCCTCTATGCTTTTCTGCTTGCCCATAG  1131
      ||||||   || ||||||||||||| ||||||
seq2  AATGGC--TTAAGCTTTTCTGCTTG-CCATAG  1117