BAC Information

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BAC

Clone NameB6Ng01-154L21
Chromosome3 (Build37)
Map Location 15,469,055 - 15,470,143
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1
Downstream geneLOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3, LOC100040034
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154L21.bB6Ng01-154L21.g
ACCDH949705DH949706
length1,1591,059
definitionDH949705|Mus musculus domesticus DNA, BAC clone: B6Ng01-154L21, 5' end.DH949706|Mus musculus domesticus DNA, BAC clone: B6Ng01-154L21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaagggctgaggagcacctgaaaaaatg
ttcaacatctgtaatcatcagggaaatgcaaatccaaacatccctgagat
tctacctcaaaccagtcagaatggctaagttcaaaatttcaggtgagaga
aaatgctcgggaggatgtgtagaaagaggaacacccctccattgctggtg
ggattgcaagcttgtacaaccgctctggaattcagtctggcggtttttca
gataattggacatagtacaacaggaagatccagcaatacctctcctgggc
atatacccagaaatgttccaactggtagtaaggacatatgctccactatg
ttcattgcagccttatttataatagccagaagctggaaaggacccagatg
tccctcaacagaggaatggatacagaaaatgtggtacatttacatcatgg
attactactcagctattaaaaacagtgaatttatgaaattcttaggcaaa
aggatgtatctggagtatatcatcctaaatgagataacccaatcacaaaa
gaagtcacttaatatgcactcactgataagtggatattagcccagaaact
tagaatacccaagatacaatttgcaaaacacaagaaaatcaagaagaacg
aagaccaatgtgtgggtacttcattgctccttagaatagggaacaaaata
cccatggaaagagttacagagacaaagtttggagctaagtcgaaaggatg
gaccatccagagactaccccacctggggatccatcccataatcagccacc
aaacccagacactattgcatatgcctgcaagattttgctgaaaggaccat
gatatagctgtctcttgtgaggctatgccagtgcgtggcaaatacaaaag
tggatgctcacagtcatctatggatggaacacagggctcccaatggagga
gctagagaaaatacccagagctgaaaggtctgcaacctataggtggaaca
catatgacttacaatatcccagagctggtgtctctagctgcatatttagt
agagatggctagttgtcaatcatggaagagaggcctagtcttgcaacttt
atatgtccagtacagaggacgcatggcaaaagtagatggatgggttaggg
gaaacagcc
gaattctttgttcagctctgatccccattttttaatggggttattcgatt
ttctggagcccaccttcttgagttctttatatatattggatattagttcc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgtcggtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttatcgattctcgacattacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccaaatctttgaggctttcccctac
cttctcctctatattttcttattatcctgttcatttggttgaatagggtg
tgattcagatagaaaattgctataacttgtcctatccacaaaagaagctc
agacttgaatttaggacagccaatttaagaattcttctcatatgcttccc
ttcatttgttctttctttcttctcttttggagtgaaggattgaaatcatt
tcctcacatttgttaatttcatgctcactattaagttactaacccagccc
tatttccaccatcatttcttctttgtagctacagtaagctattaggattt
ttggtaataagttaagtagagaaagaataaaaatacatcaaagcagacag
aaataaccaaccacccctttgcatctctatgataaattataatggccaac
tgtttaaaaggaaaaaaagtctttcttagctcctgctgctgaccacatga
cttatgactttatgagacacagacacagtcagatgtgcagtttacttatt
tccaaggagattttcattaaaactaatttcaaaccagtaatccctattag
gtgacagcagtcaaaactctttattctcacctcataaatactgtgttgct
ttctcttgctgcatataatttgccaagatttctattcttaaatttcatgt
cttaaatgatcttatgaatagattatataatatagcacctttcttatatt
atttacatacacatgtggcttttaatgtggtggtgcatcagttacacaca
ggaacatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_15469055_15470143
seq2: B6Ng01-154L21.g_65_1123

seq1  GAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTCGATT  50
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGCTCTGATCCCCATTTTTTAATGGGGTTATTCGATT  50

seq1  TTCTGGAGCCCACCTTCTTGAGCTCTTTATATATATTGGATATTAGTCCC  100
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  TTCTGGAGCCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTTCC  100

seq1  CTATCCGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150

seq1  TTTTGTCTTATTGACAGTGTTTTTTGCCTTGCAGAAGCTTTGCAATTTTA  200
      ||||||||||||| | |||| |||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGTCGGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTTA  200

seq1  TGAGGTCCCATTTATCGATTCTCGACCTTACAGCACAAGCCATTGCTGTT  250
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGAGGTCCCATTTATCGATTCTCGACATTACAGCACAAGCCATTGCTGTT  250

seq1  CTATTCAGGAATATTTCCCCTGTACCCAAATCTTTGAGGCTTTCCCCTAC  300
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTATTCAGGAATTTTTCCCCTGTACCCAAATCTTTGAGGCTTTCCCCTAC  300

seq1  TTTCTCCTCTATATTTTCTTATTATCCTGTTCATTTGGTTGAATAGGGTT  350
       |||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTCTCCTCTATATTTTCTTATTATCCTGTTCATTTGGTTGAATAGGGTG  350

seq1  TGATTCAGATAGAAAATTGCTATAACTTGTCCTATCCACAAAAGAAGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCAGATAGAAAATTGCTATAACTTGTCCTATCCACAAAAGAAGCTC  400

seq1  AGACTTGAATTTAGGACAGCCAATTTAAGAATTCTTCTCATATGCTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGACTTGAATTTAGGACAGCCAATTTAAGAATTCTTCTCATATGCTTCCC  450

seq1  TTCATTTGTTCTTTCTTTCTTCTCTTTTGGAGTGAAGGATTGAAATCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGTTCTTTCTTTCTTCTCTTTTGGAGTGAAGGATTGAAATCATT  500

seq1  TCCTCACATTTGTTAATTTCATGCTCACTATTAAGTTACTAACCCAGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACATTTGTTAATTTCATGCTCACTATTAAGTTACTAACCCAGCCC  550

seq1  TATTTCCACCATCATTTCTTCATTGTAGCTACAGTAAGTTATTAGGATTT  600
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  TATTTCCACCATCATTTCTTCTTTGTAGCTACAGTAAGCTATTAGGATTT  600

seq1  TTGGTAATATGTTAAGTAGAGAAAGAATAAAAATACATCAAAGCAGACAG  650
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAATAAGTTAAGTAGAGAAAGAATAAAAATACATCAAAGCAGACAG  650

seq1  AAATAACCAACCACCCCTTTGCATCTCTATGATAAATTATAATGGCCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACCAACCACCCCTTTGCATCTCTATGATAAATTATAATGGCCAAC  700

seq1  TGTTTAAAAGGAAAAAAAGTCTTTCTTAGCTCCTGCTGCTGACCACATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAAGGAAAAAAAGTCTTTCTTAGCTCCTGCTGCTGACCACATGA  750

seq1  CTTATGACTTTATGAGACACAGACACAGTCAGATGTGCAGTTTACTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGACTTTATGAGACACAGACACAGTCAGATGTGCAGTTTACTTATT  800

seq1  TCCAAGGAGATTTTCATTAAAACTAATTTCAAAACCAGTAATCCCTATTA  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCCAAGGAGATTTTCATTAAAACTAATTTC-AAACCAGTAATCCCTATTA  849

seq1  GGTGACAGCAGTCAAAACTCTTTATTCTCACCTCATAAATAATGTGTTGC  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGTGACAGCAGTCAAAACTCTTTATTCTCACCTCATAAATACTGTGTTGC  899

seq1  TTTCTCTTGCTGCATATAATTTGCCAAGATTTCTAGTCTTAAAATTTCAT  950
      ||||||||||||||||||||||||||||||||||| |||| |||||||||
seq2  TTTCTCTTGCTGCATATAATTTGCCAAGATTTCTATTCTT-AAATTTCAT  948

seq1  GTCCTTAAAATGATCTTATTGAATAGATTATATATATATATATATATATA  1000
      |||  | ||||||||||| |||||||||||||||             |||
seq2  GTC--TTAAATGATCTTA-TGAATAGATTATATA-------------ATA  982

seq1  TTTTACCTTTCCATATATATACATACATATATATATAACAATTGTGCTTT  1050
      |   |||||| | ||||| ||  |||||| | || |         |||||
seq2  TAGCACCTTT-CTTATAT-TATTTACATACACATGT--------GGCTTT  1022

seq1  TATATGTG--TGTGCATCAGTGTACACACAGGGAAACATGA  1089
      || |||||   |||||||||| ||||||||||  |||||||
seq2  TA-ATGTGGTGGTGCATCAGT-TACACACAGG--AACATGA  1059