BAC Information

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BAC

Clone NameB6Ng01-154O23
Chromosome3 (Build37)
Map Location 62,155,467 - 62,314,158
singlet/doubletdoublet
Overlap gene4631416L12Rik, Dhx36
Upstream geneRap2b, LOC666891, LOC669910, LOC676965
Downstream geneGpr149, LOC676984, LOC666967, Mme
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154O23.bB6Ng01-154O23.g
ACCDH949848DH949849
length6701,128
definitionDH949848|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O23, 5' end.DH949849|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,155,467 - 62,156,136)(62,313,011 - 62,314,158)
sequence
gaattcagaagtccgcttgcctctgcttcccaagtgctgggattaaaggt
gtgcaccaccactgccctgtttgacctattcttcttattggcacatactc
attgtatgtagagctggacttcataaaaatgttttctttgcagtagttca
tgtacttgactttatttcccccataacttcccttttatctttcttcttta
tctgtcttccttctcccagccttccttctattatagcataaatgtatata
ctgtgtatatacaaatgattttatgtgtctatatataaaatctaggattc
agaaatgaatagacaaatatttgtctttctgagtctaactcactgtgctt
gatacaataatctcaagctgcctctgttttctagtaaatgatataatttc
attagtctttatggctgaataaaactccactgtctatgttgtgtgtgtgt
aacctttttacatttgtatgtataaacaatgtttttatccatccacctgt
tgatgaacacataggctgattccattacttatctattgtgaatagtgcca
caataagcataaattcgtcagtctctggcttactgacttagggtttagct
gggtcatactttcaggtttatatggggctccatactcatttccatagtag
cagtctaactgacattcctg
gaattcactgggagttttgtacttaactgtttggggtctataattgacca
ccaatagccaaaactatggaagtaaagacagaagacaggattgcatactc
acaattttaagtgagcaaggtaagggagaagaagaagaaggacatctatg
gagaaaatggagatgatgaggacatccttggaatagacaggagatgtgca
cgttttgtaggcatggtgctaacttctagtctccagtgaagatccagtct
tccctgactctcctagcaagattaggatcaaaaattttggggagactctg
tctgcctttacataataaagatttcaaaaactcagatgcatttactcaaa
acacttttaggtcacagtggattaatttggatcacttcctggcctaatag
caatatccatacacatacctttatttttctttacaaaacaaacaaacaaa
caaacaaacaaacaaacaaacaaaacaccaagcacttaaaaactcctatc
tggccaggcagtggtggtgcacgtctttgttcccagcacttgggaggcag
gggcaggcagatttctgagttcaaggccagcctggtctacagagtgagtt
ccaggacagccagggctatacagagaaaccttgtcacagaaaaaccaaca
acaacaataacaacaacaacaacaacaaaaacccttctatctgccgtttt
tttgtagcttttgcttttgttgttggtcaagcatctccatcacctttaaa
tcagatgtctaaataaaaacctttggtgaaaattaaaaccaagcggttaa
atcactcaattgctttataacaggtggcacaaggcactgactagtcttgt
taataatcagcacatggcttcaaatcagtgtgtgaatcttaaactgtgct
ttatatttctcaagtgtcctgccttgaattctggaacatatacctattta
tgctatagatatgaaagtaagtaaagattatttttaataaagtaaagtaa
agtaagattaaagtaaagtaagtaagatattaggataagtaaggtaagat
atttttttaattatttacattcagcatcgcttccctctgcttcccctctc
ccacagttcttctatcattcctcctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_62155467_62156136
seq2: B6Ng01-154O23.b_49_718

seq1  GAATTCAGAAGTCCGCTTGCCTCTGCTTCCCAAGTGCTGGGATTAAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGTCCGCTTGCCTCTGCTTCCCAAGTGCTGGGATTAAAGGT  50

seq1  GTGCACCACCACTGCCCTGTTTGACCTATTCTTCTTATTGGCACATACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACCACCACTGCCCTGTTTGACCTATTCTTCTTATTGGCACATACTC  100

seq1  ATTGTATGTAGAGCTGGACTTCATAAAAATGTTTTCTTTGCAGTAGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATGTAGAGCTGGACTTCATAAAAATGTTTTCTTTGCAGTAGTTCA  150

seq1  TGTACTTGACTTTATTTCCCCCATAACTTCCCTTTTATCTTTCTTCTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTGACTTTATTTCCCCCATAACTTCCCTTTTATCTTTCTTCTTTA  200

seq1  TCTGTCTTCCTTCTCCCAGCCTTCCTTCTATTATAGCATAAATGTATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTCCTTCTCCCAGCCTTCCTTCTATTATAGCATAAATGTATATA  250

seq1  CTGTGTATATACAAATGATTTTATGTGTCTATATATAAAATCTAGGATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATATACAAATGATTTTATGTGTCTATATATAAAATCTAGGATTC  300

seq1  AGAAATGAATAGACAAATATTTGTCTTTCTGAGTCTAACTCACTGTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAATAGACAAATATTTGTCTTTCTGAGTCTAACTCACTGTGCTT  350

seq1  GATACAATAATCTCAAGCTGCCTCTGTTTTCTAGTAAATGATATAATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAATAATCTCAAGCTGCCTCTGTTTTCTAGTAAATGATATAATTTC  400

seq1  ATTAGTCTTTATGGCTGAATAAAACTCCACTGTCTATGTTGTGTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCTTTATGGCTGAATAAAACTCCACTGTCTATGTTGTGTGTGTGT  450

seq1  AACCTTTTTACATTTGTATGTATAAACAATGTTTTTATCCATCCACCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTTACATTTGTATGTATAAACAATGTTTTTATCCATCCACCTGT  500

seq1  TGATGAACACATAGGCTGATTCCATTACTTATCTATTGTGAATAGTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAACACATAGGCTGATTCCATTACTTATCTATTGTGAATAGTGCCA  550

seq1  CAATAAGCATAAATTCGTCAGTCTCTGGCTTACTGACTTAGGGTTTAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGCATAAATTCGTCAGTCTCTGGCTTACTGACTTAGGGTTTAGCT  600

seq1  GGGTCATACTTTCAGGTTTATATGGGGCTCCATACTCATTTCCATAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATACTTTCAGGTTTATATGGGGCTCCATACTCATTTCCATAGTAG  650

seq1  CAGTCTAACTGACATTCCTG  670
      ||||||||||||||||||||
seq2  CAGTCTAACTGACATTCCTG  670

seq1: chr3_62313011_62314158
seq2: B6Ng01-154O23.g_66_1193 (reverse)

seq1  GAAAGGAGGAATGGGATGAAGAACTGTGGGAGAGGGGAAGCAGGAGGGGA  50
      |||||||||||||  | ||||||||||||||||||||||||||   ||||
seq2  GAAAGGAGGAATGATA-GAAGAACTGTGGGAGAGGGGAAGCAG--AGGGA  47

seq1  GGCGATGACTGGAATGTAAATAAATAAAAAAAATAATCTTTACTTTACTT  100
       |||||| || |||||||||||| ||||||||   ||| |||| |||| |
seq2  AGCGATG-CT-GAATGTAAATAATTAAAAAAA--TATC-TTACCTTAC-T  91

seq1  TATCTTTAATAATCTTTACTTTACTTTTACTTTAATCTTTACTTTTACTT  150
      ||||  |||| ||| |||| |||| |||||||||||| |||| |||||||
seq2  TATC-CTAAT-ATC-TTAC-TTAC-TTTACTTTAATC-TTAC-TTTACTT  134

seq1  TACTTTATTTAAAAATAATCTTTACTTACTTATCATATCTAATAGCATAA  200
      ||||||| ||||||||||||||||||||||| |||||||| ||||||| |
seq2  TACTTTA-TTAAAAATAATCTTTACTTACTT-TCATATCT-ATAGCAT-A  180

seq1  AATAGGTATATGTTCCAGAATTCAAGGCAGGACACTTGAGAAATATAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTATATGTTCCAGAATTCAAGGCAGGACACTTGAGAAATATAAAG  230

seq1  CACAGTTTAAGATTCACACACTGATTTGAAGCCATGTGCTGATTATTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTAAGATTCACACACTGATTTGAAGCCATGTGCTGATTATTAAC  280

seq1  AAGACTAGTCAGTGCCTTGTGCCACCTGTTATAAAGCAATTGAGTGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTAGTCAGTGCCTTGTGCCACCTGTTATAAAGCAATTGAGTGATTT  330

seq1  AACCGCTTGGTTTTAATTTTCACCAAAGGTTTTTATTTAGACATCTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGCTTGGTTTTAATTTTCACCAAAGGTTTTTATTTAGACATCTGATT  380

seq1  TAAAGGTGATGGAGATGCTTGACCAACAACAAAAGCAAAAGCTACAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGATGGAGATGCTTGACCAACAACAAAAGCAAAAGCTACAAAAA  430

seq1  AACGGCAGATAGAAGGGTTTTTGTTGTTGTTGTTGTTGTTATTGTTGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGCAGATAGAAGGGTTTTTGTTGTTGTTGTTGTTGTTATTGTTGTTG  480

seq1  TTGGTTTTTCTGTGACAAGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTCTGTGACAAGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAA  530

seq1  CTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCCCT  580

seq1  GCCTCCCAAGTGCTGGGAACAAAGACGTGCACCACCACTGCCTGGCCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCAAGTGCTGGGAACAAAGACGTGCACCACCACTGCCTGGCCAGA  630

seq1  TAGGAGTTTTTAAGTGCTTGGTGTTTTGTTTGTTTGTTTGTTTGTTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTTTTTAAGTGCTTGGTGTTTTGTTTGTTTGTTTGTTTGTTTGTT  680

seq1  TGTTTGTTTGTTTTGTAAAGAAAAATAAAGGTATGTGTATGGATATTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTTGTAAAGAAAAATAAAGGTATGTGTATGGATATTGCT  730

seq1  ATTAGGCCAGGAAGTGATCCAAATTAATCCACTGTGACCTAAAAGTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGCCAGGAAGTGATCCAAATTAATCCACTGTGACCTAAAAGTGTTT  780

seq1  TGAGTAAATGCATCTGAGTTTTTGAAATCTTTATTATGTAAAGGCAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAAATGCATCTGAGTTTTTGAAATCTTTATTATGTAAAGGCAGACA  830

seq1  GAGTCTCCCCAAAATTTTTGATCCTAATCTTGCTAGGAGAGTCAGGGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCCCCAAAATTTTTGATCCTAATCTTGCTAGGAGAGTCAGGGAAG  880

seq1  ACTGGATCTTCACTGGAGACTAGAAGTTAGCACCATGCCTACAAAACGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATCTTCACTGGAGACTAGAAGTTAGCACCATGCCTACAAAACGTG  930

seq1  CACATCTCCTGTCTATTCCAAGGATGTCCTCATCATCTCCATTTTCTCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTCCTGTCTATTCCAAGGATGTCCTCATCATCTCCATTTTCTCCA  980

seq1  TAGATGTCCTTCTTCTTCTTCTCCCTTACCTTGCTCACTTAAAATTGTGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTCCTTCTTCTTCTTCTCCCTTACCTTGCTCACTTAAAATTGTGA  1030

seq1  GTATGCAATCCTGTCTTCTGTCTTTACTTCCATAGTTTTGGCTATTGGTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCAATCCTGTCTTCTGTCTTTACTTCCATAGTTTTGGCTATTGGTG  1080

seq1  GTCAATTATAGACCCCAAACAGTTAAGTACAAAACTCCCAGTGAATTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTATAGACCCCAAACAGTTAAGTACAAAACTCCCAGTGAATTC  1128