BAC Information

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BAC

Clone NameB6Ng01-154P18
Chromosome3 (Build37)
Map Location 51,175,651 - 51,304,280
singlet/doubletdoublet
Overlap geneA630062H14, 4930583H14Rik, LOC669130, Ndufc1, Narg1, Rab33b
Upstream geneSlc7a11, EG621304, LOC100039667, Ccrn4l, Elf2
Downstream geneSetd7, LOC100039684, Mgst2, Maml3, LOC433587, LOC100039788, LOC671890, Olfr1398-ps1, Foxo1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154P18.bB6Ng01-154P18.g
ACCDH949886DH949887
length7401,125
definitionDH949886|Mus musculus domesticus DNA, BAC clone: B6Ng01-154P18, 5' end.DH949887|Mus musculus domesticus DNA, BAC clone: B6Ng01-154P18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,175,651 - 51,176,389)(51,303,150 - 51,304,280)
sequence
gaattcaggaccttcggaagagcagtcagtgctctaacctgctgagccat
ctcaccagtccatacacagcttttttgagggctctcaaagtagcttactg
ggtaaaagtgccaccaaacctgatgacgtgaatttggtccctgggaccca
gtgtgcatcccagagaaactactctgcaagtttaggagagaaaagacacc
tataggttgtcctctgatctccacacaagcaggtggggcagacaccctct
ccagccacttgtgtatatgtagtaacattgtcaagtctgttgggcattgt
ggctcatgccattaatcacagtagtgggagccagaggcaagtagattttt
aagttcaaggccaacctggtctacagagtgagtttcaggacaaccagggc
tacatagggaggccctgtcttcacaaaacgatgcaaacagacaaaagttt
tcaagatcactttaaaaaaagatattcttattcttgcagtgaaaagaaga
aaggaatatttcaggagtacttacagttatggctggaaagagccggaagc
tgtggcctcaggctttctggctcaccactgcttactactgtgaacccaga
gaagtgcccctgcactagaatttgtgttttgatgagtgctgccttccagt
cgtgtagatgtctgacttcttgctataccttaacttagcttctcctctgt
atatacgtggagagaagagtggggttgaggggggatggac
gaattcatgaaggtgggaagagaaaacttgggctgagtcagcttcaaggc
tgtcctctgaccaccacattgctcccagtacacacacacacacacacaca
cacacagagagagagagagagagagatctttaaatgagattagaaatcac
acaaataaggccaaagagctaggtagagctccaggcatccaggtagacag
gaaacacaggacaatcagcccagttctgtgatctccagtggtctccaggg
tcacaccgggctgagacctgtatgactcctcaacaagacttaccaggctt
gacaaatactgacacatttaggtggaaggactggaaaggtggacaaatat
gtttgcgtgtttgctggcctggaggatgcaggtggaggaggctgagtctg
cttggcacgggcaaggcgtggcttctgtgttcagcactctaaaactaagt
gacacaataatttcaaatactgaatagagatttttctctacccgtataca
cgtggagctgttacctggccagtgcctcatggtattcagtataataaagt
gtgggccagttgtgaggggtgcaggtggggatgcaataataggtgaatgg
tcctttgggcagtgatgtacttcagtacttctgcagcagctctggggaca
caaggatggcaggtccaggatgccaccagtgctgaggagaacagtcctga
cagagggctcaggtggacatttctcttgggtgttgctgttcttgtatttg
tcacatctatttctttcctggatctgcctagcgactctgcaagttaccca
aatccactaagtctttctgttctttttttttttttattttgtgtatttat
tgagttggggtacatggtattgaaccttgggcctcaagtatcctcaccaa
gtaccctagcactgcacaatacgatcaaccttttagatctgtattcattc
attcattcattcattcactccatttgagacatttcaagccaggctgtctc
agactcattgtcaggtgaggaggacccttcacatgctgatcctcctgcct
ctgccttcttggattgtaatatgcagtacgttctgccaggtctcagtaca
gcctttgtctttagctatacagtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_51175651_51176389
seq2: B6Ng01-154P18.b_49_788

seq1  GAATTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTAACCTGCTGAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTAACCTGCTGAGCCAT  50

seq1  CTCACCAGTCCATACACAGCTTTTTTGAGGGCTCTCAAAGTAGCTTACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCAGTCCATACACAGCTTTTTTGAGGGCTCTCAAAGTAGCTTACTG  100

seq1  GGTAAAAGTGCCACCAAACCTGATGACGTGAATTTGGTCCCTGGGACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAGTGCCACCAAACCTGATGACGTGAATTTGGTCCCTGGGACCCA  150

seq1  GTGTGCATCCCAGAGAAACTACTCTGCAAGTTTAGGAGAGAAAAGACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATCCCAGAGAAACTACTCTGCAAGTTTAGGAGAGAAAAGACACC  200

seq1  TATAGGTTGTCCTCTGATCTCCACACAAGCAGGTGGGGCAGACACCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTTGTCCTCTGATCTCCACACAAGCAGGTGGGGCAGACACCCTCT  250

seq1  CCAGCCACTTGTGTATATGTAGTAACATTGTCAAGTCTGTTGGGCATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCACTTGTGTATATGTAGTAACATTGTCAAGTCTGTTGGGCATTGT  300

seq1  GGCTCATGCCATTAATCACAGTAGTGGGAGCCAGAGGCAAGTAGATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATGCCATTAATCACAGTAGTGGGAGCCAGAGGCAAGTAGATTTTT  350

seq1  AAGTTCAAGGCCAACCTGGTCTACAGAGTGAGTTTCAGGACAACCAGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAAGGCCAACCTGGTCTACAGAGTGAGTTTCAGGACAACCAGGGC  400

seq1  TACATAGGGAGGCCCTGTCTTCACAAAACGATGCAAACAGACAAAAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGGGAGGCCCTGTCTTCACAAAACGATGCAAACAGACAAAAGTTT  450

seq1  TCAAGATCACTTTAAAAAAAGATATTCTTATTCTTGCAGTGAAAAGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATCACTTTAAAAAAAGATATTCTTATTCTTGCAGTGAAAAGAAGA  500

seq1  AAGGAATATTTCAGGAGTACTTACAGTTATGGCTGGAAAGAGCCGGAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATATTTCAGGAGTACTTACAGTTATGGCTGGAAAGAGCCGGAAGC  550

seq1  TGTGGCCTCAGGCTTTCTGGCTCACCACTGCTTACTACTGTGAACCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCTCAGGCTTTCTGGCTCACCACTGCTTACTACTGTGAACCCAGA  600

seq1  GAAGTGCCCCTGCACTAGAATTTGTGTTTTGATGAGTGCTGCCTTCCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCCCCTGCACTAGAATTTGTGTTTTGATGAGTGCTGCCTTCCAGT  650

seq1  CGTGTAGATGTCTGACTTCTTGCTATACCTTAACTTAGCTTCTCCTCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTAGATGTCTGACTTCTTGCTATACCTTAACTTAGCTTCTCCTCTGT  700

seq1  ATATACGTGGAGAGAAGAGTGGGGTTGA-GGGGGATGGAC  739
      |||||||||||||||||||||||||||| |||||||||||
seq2  ATATACGTGGAGAGAAGAGTGGGGTTGAGGGGGGATGGAC  740

seq1: chr3_51303150_51304280
seq2: B6Ng01-154P18.g_66_1190 (reverse)

seq1  TTACTGTAATAGCCTAAAAGACAAA-GCTGTAACTGAGACCCTGGCAGAA  49
      ||||||| |||||   ||||||||| ||||| ||||||| ||||||||||
seq2  TTACTGT-ATAGC--TAAAGACAAAGGCTGT-ACTGAGA-CCTGGCAGAA  45

seq1  CGTACTGCATATTTACAATCCCAGGAGGCAGAGGCAGGAGGATCAGCATG  99
      ||||||||||| ||||||||| || |||||||||||||||||||||||||
seq2  CGTACTGCATA-TTACAATCCAAGAAGGCAGAGGCAGGAGGATCAGCATG  94

seq1  TG-AGGGTCCTCCTCACCTGACAATGAGTCTGAGACCAGCCTGGCTTGAG  148
      || |||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  TGAAGGGTCCTCCTCACCTGACAATGAGTCTGAGA-CAGCCTGGCTTGAA  143

seq1  ATGTCTCAAAATGGAGTGAATGAATGAATGAATGAATGAATACAGATCTA  198
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTC-AAATGGAGTGAATGAATGAATGAATGAATGAATACAGATCTA  192

seq1  AAAGGTTGATCGTATTGTGCAGTGCTAGGGTACTTGGTGAGGATACTTGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTGATCGTATTGTGCAGTGCTAGGGTACTTGGTGAGGATACTTGA  242

seq1  GGCCCAAGGTTCAATACCATGTACCCCAACTCAATAAATACACAAAATAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAAGGTTCAATACCATGTACCCCAACTCAATAAATACACAAAATAA  292

seq1  AAAAAAAAAAAGAACAGAAAGACTTAGTGGATTTGGGTAACTTGCAGAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGAACAGAAAGACTTAGTGGATTTGGGTAACTTGCAGAGT  342

seq1  CGCTAGGCAGATCCAGGAAAGAAATAGATGTGACAAATACAAGAACAGCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTAGGCAGATCCAGGAAAGAAATAGATGTGACAAATACAAGAACAGCA  392

seq1  ACACCCAAGAGAAATGTCCACCTGAGCCCTCTGTCAGGACTGTTCTCCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCAAGAGAAATGTCCACCTGAGCCCTCTGTCAGGACTGTTCTCCTC  442

seq1  AGCACTGGTGGCATCCTGGACCTGCCATCCTTGTGTCCCCAGAGCTGCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGGTGGCATCCTGGACCTGCCATCCTTGTGTCCCCAGAGCTGCTG  492

seq1  CAGAAGTACTGAAGTACATCACTGCCCAAAGGACCATTCACCTATTATTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTACTGAAGTACATCACTGCCCAAAGGACCATTCACCTATTATTG  542

seq1  CATCCCCACCTGCACCCCTCACAACTGGCCCACACTTTATTATACTGAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCACCTGCACCCCTCACAACTGGCCCACACTTTATTATACTGAAT  592

seq1  ACCATGAGGCACTGGCCAGGTAACAGCTCCACGTGTATACGGGTAGAGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAGGCACTGGCCAGGTAACAGCTCCACGTGTATACGGGTAGAGAA  642

seq1  AAATCTCTATTCAGTATTTGAAATTATTGTGTCACTTAGTTTTAGAGTGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTATTCAGTATTTGAAATTATTGTGTCACTTAGTTTTAGAGTGC  692

seq1  TGAACACAGAAGCCACGCCTTGCCCGTGCCAAGCAGACTCAGCCTCCTCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACAGAAGCCACGCCTTGCCCGTGCCAAGCAGACTCAGCCTCCTCC  742

seq1  ACCTGCATCCTCCAGGCCAGCAAACACGCAAACATATTTGTCCACCTTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCATCCTCCAGGCCAGCAAACACGCAAACATATTTGTCCACCTTTC  792

seq1  CAGTCCTTCCACCTAAATGTGTCAGTATTTGTCAAGCCTGGTAAGTCTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTTCCACCTAAATGTGTCAGTATTTGTCAAGCCTGGTAAGTCTTG  842

seq1  TTGAGGAGTCATACAGGTCTCAGCCCGGTGTGACCCTGGAGACCACTGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAGTCATACAGGTCTCAGCCCGGTGTGACCCTGGAGACCACTGGA  892

seq1  GATCACAGAACTGGGCTGATTGTCCTGTGTTTCCTGTCTACCTGGATGCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACAGAACTGGGCTGATTGTCCTGTGTTTCCTGTCTACCTGGATGCC  942

seq1  TGGAGCTCTACCTAGCTCTTTGGCCTTATTTGTGTGATTTCTAATCTCAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTCTACCTAGCTCTTTGGCCTTATTTGTGTGATTTCTAATCTCAT  992

seq1  TTAAAGATCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGT  1042

seq1  GTGTACTGGGAGCAATGTGGTGGTCAGAGGACAGCCTTGAAGCTGACTCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTGGGAGCAATGTGGTGGTCAGAGGACAGCCTTGAAGCTGACTCA  1092

seq1  GCCCAAGTTTTCTCTTCCCACCTTCATGAATTC  1131
      |||||||||||||||||||||||||||||||||
seq2  GCCCAAGTTTTCTCTTCCCACCTTCATGAATTC  1125