BAC Information

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BAC

Clone NameB6Ng01-155C21
Chromosome3 (Build37)
Map Location 111,876,312 - 112,024,564
singlet/doubletdoublet
Overlap geneLOC625585
Upstream geneLOC100043190, LOC668712
Downstream geneEG229746, LOC668717, Utp14B-ps, EG433643, OTTMUSG00000022462, LOC668723
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155C21.bB6Ng01-155C21.g
ACCDH950032DH950033
length1,144794
definitionDH950032|Mus musculus domesticus DNA, BAC clone: B6Ng01-155C21, 5' end.DH950033|Mus musculus domesticus DNA, BAC clone: B6Ng01-155C21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,876,312 - 111,877,481)(112,023,772 - 112,024,564)
sequence
gaattcatctagatataatgaaaaactggatataaatgtatgcataggtc
tgaaactaagagtatccttatcacagtaggtggaacataatcttcacccc
tttattatacacattgcatattattgctttaaaaacgtccattaagatgg
caagaaaggatctctacagaggaaaaaaactgatagataatatttaaacc
atttctttttagcttcttataactgtgaatgggtatgatgattaaaataa
ggaactagtccaatggtgtcagaagttacaggcattagtaagcatgccca
ttactttgtggatgtgtcaaacagaatattatgacagggaatactcagta
gaacatagtttattacctgagggcaatcaggaagtataaaagaagaaaga
agatgagctgatgtctcaaaattcttctcaagggctcgacctccaaaatc
attttctaccaagccttgcttattaaagactctttataccactaatcttt
aaaaaagacagtctttcaaaaactatatatatatatatatatatatatat
atatatatcccttttgttttatatatatatatataaacacatacagatat
aaaacctactgtgtctagtttttcttgtttttcatcacatggtttcaaaa
aatgtaagttttttttaaattaatttatttatttatgaatacactgtcac
tgacacaccagaagagggcatcagatcccatcacagatggttgtgagcca
ccatgtggtggctgggaattgaactcaggacctctgaaagagcagtcaga
gctcttacctactgagccatctctccagcccctgtaagttttatttaatt
taattatataaaattttgtagatagtgacaaaaatactggcttttctaac
tgagcttgaaactcaataatttggctagacttgttaccaagaaaggacta
gaaaccacaatctgggatactcagtagtagcattatatatgcacacactc
acgcattttatgtatgtatagatattaaaagcatgtatatggtaataatg
ataatattgctgtagttatgtcatatcaaaacattcagagaaaaactaga
agagctgtgtgtttcgagttcctgtgatggtctggtctatgctt
gaattccatcttctggcagggtacttgctgttcagttgctctgttcattc
tgtttcatatctgtagttataatccagatgtagtcatttatagactcttc
atgtgaagttactaagcaaaagggggttgcttggaggcataccaaaaagt
ggtctgtaactgaaaaaatattgctcagctatcaggctctggattaagat
acaggtccatatgtcagtgtaaagagaacacagcatatacttttgtctgt
gtattagagcctccctgcctcagatgttcaaatccttatcattccagttt
cagcttactaaaaagctaactcttggctgatttttcactaatttccagat
ttgagattgattaaactagttatagtttattgaggaactagttcttcatt
ctgatacagagttagttacctacagaagcggatgtgctttgtagtcactt
tccacaaatagttgactgaatatatcctttatttcttttctttttattct
caatttaatttagttacttttttcaggtttgaaaagaaggaaagattgta
aaccaggggataaataacaccaagaaatatgtcttccttacacaacagga
ataatgtacagatgaattaaaaaaagattgtggcagcatacacaggacat
ccatacatgtaagccatatagggaccaaggactcaaaaagaaactggaca
tgatttcccattcctaactcaggaggtaaatacaatttacaacttctcga
aaaataaaaataaattattatgttttcagatgttttttggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_111876312_111877481
seq2: B6Ng01-155C21.b_45_1188

seq1  GAATTCATCTAGATATAATGAAAAACTGGATATAAATGTATGCATAGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTAGATATAATGAAAAACTGGATATAAATGTATGCATAGGTC  50

seq1  TGAAACTAAGAGTATCCTTATCACAGTAGGTGGAACATAATCTTCACCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTAAGAGTATCCTTATCACAGTAGGTGGAACATAATCTTCACCCC  100

seq1  TTTATTATACACATTGCATATTATTGCTTTAAAAACGTCCATTAAGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATACACATTGCATATTATTGCTTTAAAAACGTCCATTAAGATGG  150

seq1  CAAGAAAGGATCTCTACAGAGGAAAAAAACTGATAGATAATATTTAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGGATCTCTACAGAGGAAAAAAACTGATAGATAATATTTAAACC  200

seq1  ATTTCTTTTTAGCTTCTTATAACTGTGAATGGGTATGATGATTAAAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTTTAGCTTCTTATAACTGTGAATGGGTATGATGATTAAAATAA  250

seq1  GGAACTAGTCCAATGGTGTCAGAAGTTACAGGCATTAGTAAGCATGCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTAGTCCAATGGTGTCAGAAGTTACAGGCATTAGTAAGCATGCCCA  300

seq1  TTACTTTGTGGATGTGTCAAACAGAATATTATGACAGGGAATACTCAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTGTGGATGTGTCAAACAGAATATTATGACAGGGAATACTCAGTA  350

seq1  GAACATAGTTTATTACCTGAGGGCAATCAGGAAGTATAAAAGAAGAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATAGTTTATTACCTGAGGGCAATCAGGAAGTATAAAAGAAGAAAGA  400

seq1  AGATGAGCTGATGTCTCAAAATTCTTCTCAAGGGCTCGACCTCCAAAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGCTGATGTCTCAAAATTCTTCTCAAGGGCTCGACCTCCAAAATC  450

seq1  ATTTTCTACCAAGCCTTGCTTATTAAAGACTCTTTATACCACTAATCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTACCAAGCCTTGCTTATTAAAGACTCTTTATACCACTAATCTTT  500

seq1  AAAAAAGACAGTCTTTCAAAAACTATATATATATATATATATATATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGACAGTCTTTCAAAAACTATATATATATATATATATATATATAT  550

seq1  ATATATATCCCTTTTGTTTTATATATATATATATAAACACATACAGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCCCTTTTGTTTTATATATATATATATAAACACATACAGATAT  600

seq1  AAAACCTACTGTGTCTAGTTTTTCTTGTTTTTCATCACATGGTTTCAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTACTGTGTCTAGTTTTTCTTGTTTTTCATCACATGGTTTCAAAA  650

seq1  AATGTAAGTTTTTTTTAAATTAATTTATTTATTTATGAATACACTGTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGTTTTTTTTAAATTAATTTATTTATTTATGAATACACTGTCAC  700

seq1  TGACACACCAGAAGAGGGCATCAGATCCCATCACAGATGGTTGTGAGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACACCAGAAGAGGGCATCAGATCCCATCACAGATGGTTGTGAGCCA  750

seq1  CCATGTGGTGGCTGGGAATTGAACTCAGGACCTCTGAAAGAGCAGTCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGTGGCTGGGAATTGAACTCAGGACCTCTGAAAGAGCAGTCAGA  800

seq1  GCTCTTACCTACTGAGCCATCTCTCCAGCCCCTGTAAGTTTTATTTAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTACCTACTGAGCCATCTCTCCAGCCCCTGTAAGTTTTATTTAATT  850

seq1  TAATTATATAAAATTTTGTAGATAGTGACAAAAATACTGGC-TTTCTAAC  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAATTATATAAAATTTTGTAGATAGTGACAAAAATACTGGCTTTTCTAAC  900

seq1  TGAGCTTGAAACTCAATAATTTGGCTAGACTTGTTACCAAGAAAGGACTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTGAAACTCAATAATTTGGCTAGACTTGTTACCAAGAAAGGACTA  950

seq1  GAAACCACCAATCTTGGGATACTCAGTAGTAGCATTATAATATGCACCAA  999
      ||||||| ||||| |||||||||||||||||||||||| ||||||||  |
seq2  GAAACCA-CAATC-TGGGATACTCAGTAGTAGCATTAT-ATATGCAC--A  995

seq1  CACTCACCGCATTTTATGTATGTATTAGATATTAAAAAGCATGTTAATAT  1049
      |||||| ||||||||||||||||| |||||||| ||||||||||  ||||
seq2  CACTCA-CGCATTTTATGTATGTA-TAGATATT-AAAAGCATGT--ATAT  1040

seq1  GGTAATAATGGATAATATTGCTGTCAGGTTATGTCATATCAATACACAAT  1099
      ||||||||| ||||||||||||||   ||||||||||||||  | ||| |
seq2  GGTAATAAT-GATAATATTGCTGT--AGTTATGTCATATCA--AAACATT  1085

seq1  CAGAGAAAACCTAGAAGGAAAGCTGTGTGTTTCGAGTTTTCCCTGTGGAT  1149
      ||||||||| |||||||   ||||||||||||||||||   ||||||   
seq2  CAGAGAAAAACTAGAAG---AGCTGTGTGTTTCGAGTT---CCTGTG---  1126

seq1  ATGTCCTGTGTCTCTATGCTT  1170
      |||  |||    |||||||||
seq2  ATGGTCTG---GTCTATGCTT  1144

seq1: chr3_112023772_112024564
seq2: B6Ng01-155C21.g_64_857 (reverse)

seq1  CACACC-AAAAACATCTGAAAACATAATAATTTATTTTTATTTTTCGAGA  49
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAAAAAACATCTGAAAACATAATAATTTATTTTTATTTTTCGAGA  50

seq1  AGTTGTAAATTGTATTTACCTCCTGAGTTAGGAATGGGAAATCATGTCCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAAATTGTATTTACCTCCTGAGTTAGGAATGGGAAATCATGTCCA  100

seq1  GTTTCTTTTTGAGTCCTTGGTCCCTATATGGCTTACATGTATGGATGTCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTTGAGTCCTTGGTCCCTATATGGCTTACATGTATGGATGTCC  150

seq1  TGTGTATGCTGCCACAATCTTTTTTTAATTCATCTGTACATTATTCCTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGCTGCCACAATCTTTTTTTAATTCATCTGTACATTATTCCTGT  200

seq1  TGTGTAAGGAAGACATATTTCTTGGTGTTATTTATCCCCTGGTTTACAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAGGAAGACATATTTCTTGGTGTTATTTATCCCCTGGTTTACAAT  250

seq1  CTTTCCTTCTTTTCAAACCTGAAAAAAGTAACTAAATTAAATTGAGAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTCTTTTCAAACCTGAAAAAAGTAACTAAATTAAATTGAGAATA  300

seq1  AAAAGAAAAGAAATAAAGGATATATTCAGTCAACTATTTGTGGAAAGTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAGAAATAAAGGATATATTCAGTCAACTATTTGTGGAAAGTGA  350

seq1  CTACAAAGCACATCCGCTTCTGTAGGTAACTAACTCTGTATCAGAATGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAGCACATCCGCTTCTGTAGGTAACTAACTCTGTATCAGAATGAA  400

seq1  GAACTAGTTCCTCAATAAACTATAACTAGTTTAATCAATCTCAAATCTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGTTCCTCAATAAACTATAACTAGTTTAATCAATCTCAAATCTGG  450

seq1  AAATTAGTGAAAAATCAGCCAAGAGTTAGCTTTTTAGTAAGCTGAAACTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTGAAAAATCAGCCAAGAGTTAGCTTTTTAGTAAGCTGAAACTG  500

seq1  GAATGATAAGGATTTGAACATCTGAGGCAGGGAGGCTCTAATACACAGAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATAAGGATTTGAACATCTGAGGCAGGGAGGCTCTAATACACAGAC  550

seq1  AAAAGTATATGCTGTGTTCTCTTTACACTGACATATGGACCTGTATCTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATATGCTGTGTTCTCTTTACACTGACATATGGACCTGTATCTTA  600

seq1  ATCCAGAGCCTGATAGCTGAGCAATATTTTTTCAGTTACAGACCACTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAGCCTGATAGCTGAGCAATATTTTTTCAGTTACAGACCACTTTT  650

seq1  TGGTATGCCTCCAAGCAACCCCCTTTTGCTTAGTAACTTCACATGAAGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGCCTCCAAGCAACCCCCTTTTGCTTAGTAACTTCACATGAAGAG  700

seq1  TCTATAAATGACTACATCTGGATTATAACTACAGATATGAAACAGAATGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAATGACTACATCTGGATTATAACTACAGATATGAAACAGAATGA  750

seq1  ACAGAGCAACTGAACAGCAAGTACCCTGCCAGAAGATGGAATTC  793
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAACTGAACAGCAAGTACCCTGCCAGAAGATGGAATTC  794