BAC Information

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BAC

Clone NameB6Ng01-155D03
Chromosome3 (Build37)
Map Location 57,524,487 - 57,623,766
singlet/doubletdoublet
Overlap geneRnf13, LOC675537
Upstream geneLOC100040139, LOC666585, Tm4sf1, LOC383862, Tm4sf4, Wwtr1, Commd2, Gm410, EG623114
Downstream genePfn2, EG433594, LOC100040216, 4921539H07Rik, Tsc22d2, D3Ucla1, Eif2a, 2810407C02Rik, 4932431H17Rik, LOC666680, LOC100040251, Siah2, LOC100040293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155D03.bB6Ng01-155D03.g
ACCDH950044DH950045
length1,098683
definitionDH950044|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D03, 5' end.DH950045|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,622,648 - 57,623,766)(57,524,487 - 57,525,169)
sequence
gaattccattagtataacaaaccactgtgagtaaaaatcaagtttgtggt
tatctaggcatgcgagtcgtaggggctactaaggaacagaaaacattttg
tggtgggtgatggacatctcatcttgattataatattgaaattagtatag
cagtgtttaaatatatatattatataagtgctaacatttattatgatgta
caacttaaatgtgtggtttattttatgtcaaccataccttaatattttta
aatgtttaagaaaaaaccaactaagacatcaaaaattaagcaggttttat
tgaggctaggaatataattcagtagtagaatggttgacttatttatacaa
gattctttcatcagtccttgactctaaaaagaaaagaaaaaaatccagaa
atataagcttttaaaccaaaagcaaaaattatggaatccaaatttacata
aaagaaagctggaaaatatgcagctatgaatccaaatccagctataacca
ctgtcaatggagtaagtccatcagtttttaaggaagtgtataattaaaac
aatccaattccatgctatttacaagatacagttaaaactgaagctacctt
aaggtttctttaaagggggtagggagcatgtgaacatattaaagtaaaag
ctatgtacccagtaaaacaatagcaaagagaatattcagcaagaatatgc
taaaaactatgggagcaatacatgaattcaaagccttcgggacttctaag
taaacagcagtttacatccattgaagcagtggggctgcatgggctctcac
tgcgtgccacagacaagcacttgaagcacagcctccaagtgagggttgct
ctcagaatagacagacagacagcagcctgcaagatgaactactgaaagat
aaaaccacactatatatgtgctttgaaggttcaaaaattttaaacttaaa
aaacacagtattaaattaacctcttctactttgctgatttggctaccaga
aataaaaataatagtgtctactgctagcattgttagaaactagatgcaac
aacgacactctatcaaagctgtacattctgtgaatatactgaatcact
gaattcacttggactaccggatccttctacggcaaagcttttattgctta
cttctcaggaagaccccgaaccccattagaaaatggcactgcttatatag
cccgcagcgtgacgtctcagcacctgatgtggcgtgacagcacctgatta
gttgcttgcccatcaccccattactacgcccctgagatgggcagtgactg
ggcgtgaattcactcttgcacttgcgcataaagcttgtttactagttagg
cgcagtggaagccagcaccatcttataatggcgattgctcatggcatggc
tctccagaaagaatgaaagaaagaaagaaagaaagagagagagagagaaa
gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aagaaagaaaaatgaacagtgtttataccctgacagttagtttgggtctg
agaaaaataaggtgagctgttgtggatttagtaattttagtgtgtcttct
tgatttgatcattccatcctctgctgcccctcctcctgggtagaacatgt
gttgttttgtctgtcttctttgaaaatgactctaaattacttgagaccgg
gtctgaagaacatggcttccactttctttctttcttatcaattaaataga
aacaaaaggaaatccaaaaaattattagatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_57622648_57623766
seq2: B6Ng01-155D03.b_47_1144 (reverse)

seq1  AGTGATTTCAGTATATTCACAGAATTGTACAGCTTTGATTAGAGTTGTCT  50
      ||||| |||||||||||||||||| ||||||||||||| ||||| |||| 
seq2  AGTGA-TTCAGTATATTCACAGAA-TGTACAGCTTTGA-TAGAG-TGTC-  45

seq1  GTTGTTTTGCATTCTTAGGTTTTCTAAAACAATGCTAAGCAGTAGAACAC  100
      ||||  ||||||   |||  |||||  ||||||||| |||||||| ||||
seq2  GTTG--TTGCAT--CTAG--TTTCT--AACAATGCT-AGCAGTAG-ACAC  85

seq1  TATTATTTTTAATTTTCTGGTAGCCAAATTCAGCAAAGTTAGAAGAGGTT  150
      |||||||||||  ||||||||||||||| ||||||||| |||||||||||
seq2  TATTATTTTTA--TTTCTGGTAGCCAAA-TCAGCAAAG-TAGAAGAGGTT  131

seq1  AATTTAAATACTGTGTTTTTTAAGTTTAAAATTTTTTGAACCTTCAAAGC  200
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATTT-AATACTGTGTTTTTTAAGTTTAAAA-TTTTTGAACCTTCAAAGC  179

seq1  ACATATATAGTGTGGTTTTATCTTTCAGTAGTTCATCTTGCAGGCTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATAGTGTGGTTTTATCTTTCAGTAGTTCATCTTGCAGGCTGCTG  229

seq1  TCTGTCTGTCTATTCTGAGAGCAACCCTCACTTGGAGGCTGTGCTTCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCTATTCTGAGAGCAACCCTCACTTGGAGGCTGTGCTTCAAG  279

seq1  TGCTTGTCTGTGGCACGCAGTGAGAGCCCATGCAGCCCCACTGCTTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTCTGTGGCACGCAGTGAGAGCCCATGCAGCCCCACTGCTTCAAT  329

seq1  GGATGTAAACTGCTGTTTACTTAGAAGTCCCGAAGGCTTTGAATTCATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTAAACTGCTGTTTACTTAGAAGTCCCGAAGGCTTTGAATTCATGT  379

seq1  ATTGCTCCCATAGTTTTTAGCATATTCTTGCTGAATATTCTCTTTGCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCCCATAGTTTTTAGCATATTCTTGCTGAATATTCTCTTTGCTAT  429

seq1  TGTTTTACTGGGTACATAGCTTTTACTTTAATATGTTCACATGCTCCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTACTGGGTACATAGCTTTTACTTTAATATGTTCACATGCTCCCTA  479

seq1  CCCCCTTTAAAGAAACCTTAAGGTAGCTTCAGTTTTAACTGTATCTTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTTAAAGAAACCTTAAGGTAGCTTCAGTTTTAACTGTATCTTGTA  529

seq1  AATAGCATGGAATTGGATTGTTTTAATTATACACTTCCTTAAAAACTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCATGGAATTGGATTGTTTTAATTATACACTTCCTTAAAAACTGAT  579

seq1  GGACTTACTCCATTGACAGTGGTTATAGCTGGATTTGGATTCATAGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTACTCCATTGACAGTGGTTATAGCTGGATTTGGATTCATAGCTGC  629

seq1  ATATTTTCCAGCTTTCTTTTATGTAAATTTGGATTCCATAATTTTTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCCAGCTTTCTTTTATGTAAATTTGGATTCCATAATTTTTGCTT  679

seq1  TTGGTTTAAAAGCTTATATTTCTGGATTTTTTTCTTTTCTTTTTAGAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTAAAAGCTTATATTTCTGGATTTTTTTCTTTTCTTTTTAGAGTC  729

seq1  AAGGACTGATGAAAGAATCTTGTATAAATAAGTCAACCATTCTACTACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTGATGAAAGAATCTTGTATAAATAAGTCAACCATTCTACTACTG  779

seq1  AATTATATTCCTAGCCTCAATAAAACCTGCTTAATTTTTGATGTCTTAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATTCCTAGCCTCAATAAAACCTGCTTAATTTTTGATGTCTTAGT  829

seq1  TGGTTTTTTCTTAAACATTTAAAAATATTAAGGTATGGTTGACATAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTTCTTAAACATTTAAAAATATTAAGGTATGGTTGACATAAAAT  879

seq1  AAACCACACATTTAAGTTGTACATCATAATAAATGTTAGCACTTATATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACACATTTAAGTTGTACATCATAATAAATGTTAGCACTTATATAA  929

seq1  TATATATATTTAAACACTGCTATACTAATTTCAATATTATAATCAAGATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATTTAAACACTGCTATACTAATTTCAATATTATAATCAAGATG  979

seq1  AGATGTCCATCACCCACCACAAAATGTTTTCTGTTCCTTAGTAGCCCCTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCCATCACCCACCACAAAATGTTTTCTGTTCCTTAGTAGCCCCTA  1029

seq1  CGACTCGCATGCCTAGATAACCACAAACTTGATTTTTACTCACAGTGGTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTCGCATGCCTAGATAACCACAAACTTGATTTTTACTCACAGTGGTT  1079

seq1  TGTTATACTAATGGAATTC  1119
      |||||||||||||||||||
seq2  TGTTATACTAATGGAATTC  1098

seq1: chr3_57524487_57525169
seq2: B6Ng01-155D03.g_67_749

seq1  GAATTCACTTGGACTACCGGATCCTTCTACGGCAAAGCTTTTATTGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGGACTACCGGATCCTTCTACGGCAAAGCTTTTATTGCTTA  50

seq1  CTTCTCAGGAAGACCCCGAACCCCATTAGAAAATGGCACTGCTTATATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAGGAAGACCCCGAACCCCATTAGAAAATGGCACTGCTTATATAG  100

seq1  CCCGCAGCGTGACGTCTCAGCACCTGATGTGGCGTGACAGCACCTGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCAGCGTGACGTCTCAGCACCTGATGTGGCGTGACAGCACCTGATTA  150

seq1  GTTGCTTGCCCATCACCCCATTACTACGCCCCTGAGATGGGCAGTGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTGCCCATCACCCCATTACTACGCCCCTGAGATGGGCAGTGACTG  200

seq1  GGCGTGAATTCACTCTTGCACTTGCGCATAAAGCTTGTTTACTAGTTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGAATTCACTCTTGCACTTGCGCATAAAGCTTGTTTACTAGTTAGG  250

seq1  CGCAGTGGAAGCCAGCACCATCTTATAATGGCGATTGCTCATGGCATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGTGGAAGCCAGCACCATCTTATAATGGCGATTGCTCATGGCATGGC  300

seq1  TCTCCAGAAAGAATGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGAAAGAATGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAA  350

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  400

seq1  AAGAAAGAAAAATGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAAATGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCTG  450

seq1  AGAAAAATAAGGTGAGCTGTTGTGGATTTAGTAATTTTAGTGTGTCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATAAGGTGAGCTGTTGTGGATTTAGTAATTTTAGTGTGTCTTCT  500

seq1  TGATTTGATCATTCCATCCTCTGCTGCCCCTCCTCCTGGGTAGAACATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGATCATTCCATCCTCTGCTGCCCCTCCTCCTGGGTAGAACATGT  550

seq1  GTTGTTTTGTCTGTCTTCTTTGAAAATGACTCTAAATTACTTGAGACCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTGTCTGTCTTCTTTGAAAATGACTCTAAATTACTTGAGACCGG  600

seq1  GTCTGAAGAACATGGCTTCCACTTTCTTTCTTTCTTATCAATTAAATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGAACATGGCTTCCACTTTCTTTCTTTCTTATCAATTAAATAGA  650

seq1  AACAAAAGGAAATCCAAAAAATTATTAGATCTT  683
      |||||||||||||||||||||||||||||||||
seq2  AACAAAAGGAAATCCAAAAAATTATTAGATCTT  683