BAC Information

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BAC

Clone NameB6Ng01-155D08
Chromosome3 (Build37)
Map Location 14,149,207 - 14,264,572
singlet/doubletdoublet
Overlap gene0710005M24Rik
Upstream geneLOC100039823, LOC100039861, LOC100041679, LOC100041667, LOC100039882
Downstream geneEG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155D08.bB6Ng01-155D08.g
ACCDH950054DH950055
length1,195571
definitionDH950054|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D08, 5' end.DH950055|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,263,368 - 14,264,572)(14,149,207 - 14,149,783)
sequence
gaattctgcttctgtatcttggccctaggcctcaggatgtagttttatct
tcttctcacctaatggtccaccccatattttagtatggctttcagaacac
taggtatcatggtcagatttctagcaggcagaaaaacatcaggattattc
ccttttagggacatatccctggaggagttctgacagtcaaagcccaaatt
acaccagagtttaagcatctagcagcaagaaagacatgggattctattgt
caactggacacatacctacttgaaacaactcagaggacataatctatgtt
agaaacatagtcttttattgagaaaaatgaataataaagcaatattaatc
ctaagtattcatactgtacaatataacacatgtttgtacaaatattttgt
gctaccatttaaaatttataatttcaaaccctataatttgaatttagaac
taaatgataggattttcaatctgagggacacagactagtaaacagttaag
ctttaatctctgagaacaattttgtactgccttttcattaagtcacacaa
aaatactatccctggattcaagagaggaagttattttcaagtatctatta
aatgccagtttattattaaatgggatatttcagaaatgaactaaagtcta
taaaataacctactcttccattaatgagcaaagttgtttggacacatggt
cctaatgtcccttatcagctgttaaagattaattttggtgtttggtagca
tagcctcagtgtcaaaggatagtttgtaaatcattcaaacactgttcatc
agatgattgatatgatactagttcttttctctttctgaaatagagtccaa
tgtcaatatcaatggaaagcccagctattgatgtaaactgaacagagctt
accaatagatatttttactggattgatcccagtaaaaactatcagttgat
cttctaggacagtagtggcaagaccaaaaacagtttgctttagtgattga
agagaaggaaattcagaagagatgcttagattttttgtatgagggatcct
agtatgaaatatgataatcatatgatatatgaattcatattgatagcagt
ttatgaatttttcttttatgttgaacaaataaactaaaaaaattaaagtt
ttttttttaaactggtgagtttaaaagaaattcttttagagcaag
aagtttgtctgaattctgtttgtaatgacttttacctttgaagtctacaa
gcagcctaatcaaggcagtaagagtcaagaattaccaggctggccatgtg
gtacttaggcatgctgactgagtacttactatgttgtaattcgtcctcca
ggatttaacaaagcattcaactaagcaataaacctcccgagtcttccagc
tattgagtttctgtgcatattgggaaatatctgatcacagtctaatcctg
caattgaataacactcaaagtaagcattgtggtaaaaatcactgaaaaat
gaaaagcacagatcattctgatcaatatttttggtctttgtttataagca
agccaggagctatctcctctttgaatcttctttttctttatcatggtgaa
gttcttcacctggatgttctccttaccttggttccttttgttatcattta
aattaaaatattagctaaaggaaaatgaacctatttgaattacaaatcat
agggaagtaagaaagccggtaggacaacttggagcggcctgcagcaggca
tgtcaggggggggagggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14263368_14264572
seq2: B6Ng01-155D08.b_47_1241 (reverse)

seq1  CTTGCTTCTTAAAGAATTTCTTTTTAAAACT-ACCAGTTTTTAAAAAAAA  49
      ||||| ||| ||||||||||||||  ||||| ||||||||    ||||||
seq2  CTTGC-TCTAAAAGAATTTCTTTT--AAACTCACCAGTTT----AAAAAA  43

seq1  AAAACTTT-ATATTTTTAGTGTATTTGTGTCACAT-AAAGAACATATCAT  97
      |||||||| || |||||||| |||||||   |||| |||||| |  ||||
seq2  AAAACTTTAATTTTTTTAGTTTATTTGTTCAACATAAAAGAAAAATTCAT  93

seq1  AAACTGCTATCAATATTGAATTCATATATCATATGATTATCATATATCAT  147
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  AAACTGCTATCAATA-TGAATTCATATATCATATGATTATCATATTTCAT  142

seq1  ACTAGGATCCCTCATACAGAAAATCTTAAGCATCTCTTTCTGAATTTTCC  197
      |||||||||||||||||| |||||| |||||||||| ||||||| |||||
seq2  ACTAGGATCCCTCATACAAAAAATC-TAAGCATCTC-TTCTGAA-TTTCC  189

seq1  TTCTCTTTCAATCACTAAAGCAAACTGTTTTTGGTCTTGCCACCTACTGT  247
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCTC-TTCAATCACTAAAGCAAACTGTTTTTGGTCTTGCCA-CTACTGT  237

seq1  CCTAGAAGATCAACTGATAGTTTTTACTGGGATCAATCCAGTAAAAATAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAGATCAACTGATAGTTTTTACTGGGATCAATCCAGTAAAAATAT  287

seq1  CTATTGGTAAGCTCTGTTCAGTTTACATCAATAGCTGGGCTTTCCATTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGTAAGCTCTGTTCAGTTTACATCAATAGCTGGGCTTTCCATTGA  337

seq1  TATTGACATTGGACTCTATTTCAGAAAGAGAAAAGAACTAGTATCATATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACATTGGACTCTATTTCAGAAAGAGAAAAGAACTAGTATCATATC  387

seq1  AATCATCTGATGAACAGTGTTTGAATGATTTACAAACTATCCTTTGACAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCTGATGAACAGTGTTTGAATGATTTACAAACTATCCTTTGACAC  437

seq1  TGAGGCTATGCTACCAAACACCAAAATTAATCTTTAACAGCTGATAAGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTATGCTACCAAACACCAAAATTAATCTTTAACAGCTGATAAGGG  487

seq1  ACATTAGGACCATGTGTCCAAACAACTTTGCTCATTAATGGAAGAGTAGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGGACCATGTGTCCAAACAACTTTGCTCATTAATGGAAGAGTAGG  537

seq1  TTATTTTATAGACTTTAGTTCATTTCTGAAATATCCCATTTAATAATAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATAGACTTTAGTTCATTTCTGAAATATCCCATTTAATAATAAA  587

seq1  CTGGCATTTAATAGATACTTGAAAATAACTTCCTCTCTTGAATCCAGGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATTTAATAGATACTTGAAAATAACTTCCTCTCTTGAATCCAGGGA  637

seq1  TAGTATTTTTGTGTGACTTAATGAAAAGGCAGTACAAAATTGTTCTCAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTTTGTGTGACTTAATGAAAAGGCAGTACAAAATTGTTCTCAGA  687

seq1  GATTAAAGCTTAACTGTTTACTAGTCTGTGTCCCTCAGATTGAAAATCCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGCTTAACTGTTTACTAGTCTGTGTCCCTCAGATTGAAAATCCT  737

seq1  ATCATTTAGTTCTAAATTCAAATTATAGGGTTTGAAATTATAAATTTTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTAGTTCTAAATTCAAATTATAGGGTTTGAAATTATAAATTTTAA  787

seq1  ATGGTAGCACAAAATATTTGTACAAACATGTGTTATATTGTACAGTATGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGCACAAAATATTTGTACAAACATGTGTTATATTGTACAGTATGA  837

seq1  ATACTTAGGATTAATATTGCTTTATTATTCATTTTTCTCAATAAAAGACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAGGATTAATATTGCTTTATTATTCATTTTTCTCAATAAAAGACT  887

seq1  ATGTTTCTAACATAGATTATGTCCTCTGAGTTGTTTCAAGTAGGTATGTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTAACATAGATTATGTCCTCTGAGTTGTTTCAAGTAGGTATGTG  937

seq1  TCCAGTTGACAATAGAATCCCATGTCTTTCTTGCTGCTAGATGCTTAAAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTGACAATAGAATCCCATGTCTTTCTTGCTGCTAGATGCTTAAAC  987

seq1  TCTGGTGTAATTTGGGCTTTGACTGTCAGAACTCCTCCAGGGATATGTCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGTAATTTGGGCTTTGACTGTCAGAACTCCTCCAGGGATATGTCC  1037

seq1  CTAAAAGGGAATAATCCTGATGTTTTTCTGCCTGCTAGAAATCTGACCAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGGGAATAATCCTGATGTTTTTCTGCCTGCTAGAAATCTGACCAT  1087

seq1  GATACCTAGTGTTCTGAAAGCCATACTAAAATATGGGGTGGACCATTAGG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTAGTGTTCTGAAAGCCATACTAAAATATGGGGTGGACCATTAGG  1137

seq1  TGAGAAGAAGATAAAACTACATCCTGAGGCCTAGGGCCAAGATACAGAAG  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGAAGATAAAACTACATCCTGAGGCCTAGGGCCAAGATACAGAAG  1187

seq1  CAGAATTC  1205
      ||||||||
seq2  CAGAATTC  1195

seq1: chr3_14149207_14149783
seq2: B6Ng01-155D08.g_68_644

seq1  GAATTCAAGTTTGTCTGAATTCTGTTTGTAATGACTTTTACCTTTGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTTTGTCTGAATTCTGTTTGTAATGACTTTTACCTTTGAAGT  50

seq1  CTACAAGCAGCCTAATCAAGGCAGTAAGAGTCAAGAATTACCAGGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAGCAGCCTAATCAAGGCAGTAAGAGTCAAGAATTACCAGGCTGGC  100

seq1  CATGTGGTACTTAGGCATGCTGACTGAGTACTTACTATGTTGTAATTCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGTACTTAGGCATGCTGACTGAGTACTTACTATGTTGTAATTCGT  150

seq1  CCTCCAGGATTTAACAAAGCATTCAACTAAGCAATAAACCTCCCGAGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGGATTTAACAAAGCATTCAACTAAGCAATAAACCTCCCGAGTCT  200

seq1  TCCAGCTATTGAGTTTCTGTGCATATTGGGAAATATCTGATCACAGTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTATTGAGTTTCTGTGCATATTGGGAAATATCTGATCACAGTCTA  250

seq1  ATCCTGCAATTGAATAACACTCAAAGTAAGCATTGTGGTAAAAATCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCAATTGAATAACACTCAAAGTAAGCATTGTGGTAAAAATCACTG  300

seq1  AAAAATGAAAAGCACAGATCATTCTGATCAATATTTTTGGTCTTTGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAAAAGCACAGATCATTCTGATCAATATTTTTGGTCTTTGTTTA  350

seq1  TAAGCAAGCCAGGAGCTATCTCCTCTTTGAATCTTCTTTTTCTTTATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAAGCCAGGAGCTATCTCCTCTTTGAATCTTCTTTTTCTTTATCAT  400

seq1  GGTGAAGTTCTTCACCTGGATGTTCTCCTTACCTTGGTTCCTTTTGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGTTCTTCACCTGGATGTTCTCCTTACCTTGGTTCCTTTTGTTAT  450

seq1  CATTTAAATTAAAATATTAGCTAAAGGAAAATGAACCTATTTGAATTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAATTAAAATATTAGCTAAAGGAAAATGAACCTATTTGAATTACA  500

seq1  AATCATAGGGAAGTAAGAAAGCCGGTAGGACAACTTGGAGCGGCCTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATAGGGAAGTAAGAAAGCCGGTAGGACAACTTGGAGCGGCCTGCAG  550

seq1  CAGGCATGTCAGGGGGGGGAGGGGGAG  577
      |||||||||||||||||||||||||||
seq2  CAGGCATGTCAGGGGGGGGAGGGGGAG  577