BAC Information

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BAC

Clone NameB6Ng01-155D24
Chromosome3 (Build37)
Map Location 17,547,615 - 17,548,681
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040034, LOC100040059, EG383936, LOC622737
Downstream geneENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1, LOC622921, LOC100040153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155D24.bB6Ng01-155D24.g
ACCDH950086DH950087
length1,0651,137
definitionDH950086|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D24, 5' end.DH950087|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagatctattgtaattaaatgaatgtatctgaatcaatagcttt
atatatacacatatttattttgggggactggagaaatgccttaatggtta
agagtgcttgatgttttgcaggaacccggattcagtttccagcacccaca
tggtggcttacaaccatttgtctatttataattgcagtttcatggaatcc
taatgtgtcttcttacttctctgggtactcacacatggggtatacttgca
tacatggaggcaaaacagttgtagtaaataaaagaaaataaataatgaaa
agaagtaaataatgaaaagatgtatctccaacaaactcttatttgcagtt
gcttctgtgataaatgtagttctgaaaaacaagaaataataaatttacca
cagaagattacatgtaatggagatctaggcaattaaattattagtgacat
ggctaagtgaattgtggaatgccatggaaacagtaaggaaatttgtaaag
agaaaacagaggaaatctagctcaaaaagtacctatgaggcaggaaatta
ttagcttagagaagaacattccaagagccagagaggaagctcagttggta
aagaatctgtctcagaagcgtgagaggttgaaataaatttcctggaagat
atattttttaaaagatacatgagtatgacagtagctgacaaaggcagacc
tacggattttattgtctagccagcctatcctattatttgagatcttgtct
caaaaccaaagtgaggctaaagagattttctcaataggtaaagcacttcg
ttatagaaacatgagtatctgagttcagaagcccaggattaacacaaagc
tggatgtggggattcacatctattaccacaccattactgtggggagatag
gaagtgaaaataagaaaatgacaaaaacttgtatcctgtatgtctggaga
atgcaactgtggacagtaagaaagagaaacctgtctgaaacaaggtagaa
gctgagacagacaccacatattcttcatgacttctataaaacatgtcatc
cctaataccacatga
gaattctcacctgaggtatacagaatggctgacaagcacctgaaaagatg
ttcagaatccttaatcatcagggaaatgcaaatcaaagcaaccctgagtt
tccacctcacaccagttagaatgtctaagatcaaaaacacaggtgtcagc
agatgctggcgagaatgtggagaaagaggaacactcctccagtgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
aaaaattggacatagtactaccggaggatcctgcagtacctctcctgggc
atatatccagaagatgttccaaccagtaagaaggacacatgctccactat
gttcatagcagccttgtttataacagccagaagttggaaacaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
aaatactactgttattaaaaagaatgaatttatgaaattcctaggcaaat
ggatggacctggagggcatcatcctgagtgaggtacctcaatcacaaaag
aactcacatgatatgtcctcactgatgagtggatattagcccagaaactt
agaatacccaggatataagatacaatttgcgaaacacatgaagcttggga
aaatgaagaccaaggtgtggatactttgccccttcttggaattgggagca
aggtacccatggaaggagctacagagacagagtttggggcttagacgaaa
ggatggatcatctagagactgccatacccggggatccattccataatcag
cctccaaatgctgacaccattgcaatcactagcaagattttgctgaaaga
accctgatatagatgtctcttgtgagactatgtgggtgcctagcaaacac
agaagtggatgctcacagtcagctattgatgagcacaggccccaatgaga
gctggagagcacccaggagctgggggatctgcaacctataggtgatacat
atgaactatcagtaccccccctccagctcatgtctctagctgcatttgta
tcagaagatggcctgtcggcatcagtggaagaagtccagacttaattgcc
tcagtacaggtacacagtcaaagtggaagtgggtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_17547615_17548681
seq2: B6Ng01-155D24.b_46_1110 (reverse)

seq1  TCATGT-GTATTAGTGATGACATG-TTTATAGAAGTCATTGAAGAATATG  48
      |||||| ||||||| ||||||||| ||||||||||||| |||||||||||
seq2  TCATGTGGTATTAGGGATGACATGTTTTATAGAAGTCA-TGAAGAATATG  49

seq1  TGGTGTCTGTCTTCAGCTTCTACCTTGTTTCAGACAGGTTTTCTCTTTCT  98
      ||||||||||| |||||||||||||||||||||||||| |||||||||||
seq2  TGGTGTCTGTC-TCAGCTTCTACCTTGTTTCAGACAGG-TTTCTCTTTCT  97

seq1  TACTGTCCACAGTTGCATTCTCCAGACATACAGGATACAAGTTTTTTGTC  148
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TACTGTCCACAGTTGCATTCTCCAGACATACAGGATACAAG-TTTTTGTC  146

seq1  ATTTTCTTATTTTCACTTCCTATCTCCCCACAGTAATGGTGTGGTAATAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTATTTTCACTTCCTATCTCCCCACAGTAATGGTGTGGTAATAG  196

seq1  ATGTGAATCCCCACATCCAGCTTTGTGTTAATCCTGGGCTTCTGAACTCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAATCCCCACATCCAGCTTTGTGTTAATCCTGGGCTTCTGAACTCA  246

seq1  GATACTCATGTTTCTATAACGAAGTGCTTTACCTATTGAGAAAATCTCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCATGTTTCTATAACGAAGTGCTTTACCTATTGAGAAAATCTCTT  296

seq1  TAGCCTCACTTTGGTTTTGAGACAAGATCTCAAATAATAGGATAGGCTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCACTTTGGTTTTGAGACAAGATCTCAAATAATAGGATAGGCTGG  346

seq1  CTAGACAATAAAATCCGTAGGTCTGCCTTTGTCAGCTACTGTCATACTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACAATAAAATCCGTAGGTCTGCCTTTGTCAGCTACTGTCATACTCA  396

seq1  TGTATCTTTTAAAAAATATATCTTCCAGGAAATTTATTTCAACCTCTCAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTTTTAAAAAATATATCTTCCAGGAAATTTATTTCAACCTCTCAC  446

seq1  GCTTCTGAGACAGATTCTTTACCAACTGAGCTTCCTCTCTGGCTCTTGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGAGACAGATTCTTTACCAACTGAGCTTCCTCTCTGGCTCTTGGA  496

seq1  ATGTTCTTCTCTAAGCTAATAATTTCCTGCCTCATAGGTACTTTTTGAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTCTCTAAGCTAATAATTTCCTGCCTCATAGGTACTTTTTGAGC  546

seq1  TAGATTTCCTCTGTTTTCTCTTTACAAATTTCCTTACTGTTTCCATGGCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTCCTCTGTTTTCTCTTTACAAATTTCCTTACTGTTTCCATGGCA  596

seq1  TTCCACAATTCACTTAGCCATGTCACTAATAATTTAATTGCCTAGATCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAATTCACTTAGCCATGTCACTAATAATTTAATTGCCTAGATCTC  646

seq1  CATTACATGTAATCTTCTGTGGTAAATTTATTATTTCTTGTTTTTCAGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACATGTAATCTTCTGTGGTAAATTTATTATTTCTTGTTTTTCAGAA  696

seq1  CTACATTTATCACAGAAGCAACTGCAAATAAGAGTTTGTTGGAGATACAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTATCACAGAAGCAACTGCAAATAAGAGTTTGTTGGAGATACAT  746

seq1  CTTTTCATTATTTACTTCTTTTCATTATTTATTTTCTTTTATTTACTACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATTATTTACTTCTTTTCATTATTTATTTTCTTTTATTTACTACA  796

seq1  ACTGTTTTGCCTCCATGTATGCAAGTATACCCCATGTGTGAGTACCCAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTGCCTCCATGTATGCAAGTATACCCCATGTGTGAGTACCCAGA  846

seq1  GAAGTAAGAAGACACATTAGGATTCCATGAAACTGCAATTATAAATAGAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAGAAGACACATTAGGATTCCATGAAACTGCAATTATAAATAGAC  896

seq1  AAATGGTTGTAAGCCACCATGTGGGTGCTGGAAACTGAATCCGGGTTCCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTGTAAGCCACCATGTGGGTGCTGGAAACTGAATCCGGGTTCCT  946

seq1  GCAAAACATCAAGCACTCTTAACCATTAAGGCATTTCTCCAGTCCCCCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACATCAAGCACTCTTAACCATTAAGGCATTTCTCCAGTCCCCCAA  996

seq1  AATAAATATGTGTATATATAAAGCTATTGATTCAGATACATTCATTTAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATATGTGTATATATAAAGCTATTGATTCAGATACATTCATTTAAT  1046

seq1  TACAATAGATCTGGAATTC  1067
      |||||||||||||||||||
seq2  TACAATAGATCTGGAATTC  1065