BAC Information

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BAC

Clone NameB6Ng01-155F12
Chromosome3 (Build37)
Map Location 43,017,499 - 43,018,400
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039204, LOC100039219
Downstream geneLOC677788, LOC100039264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155F12.g
ACCDH950154
length1,055
definitionDH950154|Mus musculus domesticus DNA, BAC clone: B6Ng01-155F12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttaggggagccacgggtgcttacccttcctattactcaggttc
gatgacccgacactcatgtaaatactgcaggtggatctggggaaactaca
cggtgactcaactaactttgaacatatggggtggtcctgggaggcccttt
tcttttctgtgttttgccatccaaggaaaatttgatattttgtattctgt
gcattttttcattcttctgttttcataaatcacaaccaacatgaaattta
acatcagaaccatttgctcttactgcaagggaatgaggactagggggagg
tgagggatttctacagatttatagctttgttattgttaaaaaaaacaaat
tggtttgcattaggcacttattccagatctttgaaagttcatcttcatcc
atctctgtgattctaagtatcttgtaatcagaggacactaactacatctt
tttgtgactagctaattcaaaaaaattgcttggtttttacccaggggtaa
tattagtcaattattaagccaatttattttctatttttataagattttcc
tttattatttaaatgagttccaaaaattttaactcaatattactgaagta
agtttaatttatgtctaaatgctactagagatagagtaaattataaatat
ttgaaagcctgtatcttagtattttcagtacacgtgcagaatgatatata
cagtttgataacataagtatctgtacatgtttattagtgtgtatttgaaa
aatttatgtctgaagttgtttagttacaatgaataagtgactgatacagg
ataaagaaaaagcagtttggcaagaccatttgatgtacgcagacatagat
tgggtcctatacaacttctgatttaaaaagaaaacttgaaggcacatgat
gtgactaagagccttatctggaattgagtggactatatttgtaaatgcaa
agagctcatttgtagatttgaaaatataccggattaatttactcttttgg
tacaatttgtgattctgttggctcatttcaagaattatgggttattttct
tctta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_43017499_43018400
seq2: B6Ng01-155F12.g_238_1120 (reverse)

seq1  TAAGAAGAAAAATAAACTCATATATCTTGAAAATTGAGCCAACACAAGAA  50
      |||||||||||   ||| ||||  ||||||||  ||||||||||     |
seq2  TAAGAAGAAAA--TAACCCATAATTCTTGAAA--TGAGCCAACA----GA  42

seq1  ATCACAAAATTGTGACCAATAGAAGTTAAAATTAATCCCGGTATATTTTC  100
      ||||| ||||||| ||||| || |||  |||||||| |||||||||||||
seq2  ATCAC-AAATTGT-ACCAAAAG-AGT--AAATTAAT-CCGGTATATTTTC  86

seq1  AAATCTACAAATGAGCTTCTTTTGCATTTTACAAATATAGTCCACTCCAA  150
      |||||||||||||||||   |||||| ||||||||||||||||||| |||
seq2  AAATCTACAAATGAGCT--CTTTGCA-TTTACAAATATAGTCCACT-CAA  132

seq1  TTCCAGATAAGGCTCTTAGTCACATCATGTGCCTTCAAGTTTTCTTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATAAGGCTCTTAGTCACATCATGTGCCTTCAAGTTTTCTTTTTA  182

seq1  AATCAGAAGTTGTATAGGACCCAATCTATGTCTGCGTACATCAAATGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAAGTTGTATAGGACCCAATCTATGTCTGCGTACATCAAATGGTC  232

seq1  TTGCCAAACTGCTTTTTCTTTATCCTGTATCAGTCACTTATTCATTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAAACTGCTTTTTCTTTATCCTGTATCAGTCACTTATTCATTGTAA  282

seq1  CTAAACAACTTCAGACATAAATTTTTCAAATACACACTAATAAACATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAACTTCAGACATAAATTTTTCAAATACACACTAATAAACATGTA  332

seq1  CAGATACTTATGTTATCAAACTGTATATATCATTCTGCACGTGTACTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACTTATGTTATCAAACTGTATATATCATTCTGCACGTGTACTGAA  382

seq1  AATACTAAGATACAGGCTTTCAAATATTTATAATTTACTCTATCTCTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAAGATACAGGCTTTCAAATATTTATAATTTACTCTATCTCTAGT  432

seq1  AGCATTTAGACATAAATTAAACTTACTTCAGTAATATTGAGTTAAAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTAGACATAAATTAAACTTACTTCAGTAATATTGAGTTAAAATTT  482

seq1  TTGGAACTCATTTAAATAATAAAGGAAAATCTTATAAAAATAGAAAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACTCATTTAAATAATAAAGGAAAATCTTATAAAAATAGAAAATAA  532

seq1  ATTGGCTTAATAATTGACTAATATTACCCCTGGGTAAAAACCAAGCAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTTAATAATTGACTAATATTACCCCTGGGTAAAAACCAAGCAATT  582

seq1  TTTTTGAATTAGCTAGTCACAAAAAGATGTAGTTAGTGTCCTCTGATTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAATTAGCTAGTCACAAAAAGATGTAGTTAGTGTCCTCTGATTAC  632

seq1  AAGATACTTAGAATCACAGAGATGGATGAAGATGAACTTTCAAAGATCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACTTAGAATCACAGAGATGGATGAAGATGAACTTTCAAAGATCTG  682

seq1  GAATAAGTGCCTAATGCAAACCAATTTGTTTTTTTTAACAATAACAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGTGCCTAATGCAAACCAATTTGTTTTTTTTAACAATAACAAAGC  732

seq1  TATAAATCTGTAGAAAT-TATGACTGTACATTATAAATATCATTCACCTG  799
      |||||||||||||||||   | ||    |    ||    |||||| | ||
seq2  TATAAATCTGTAGAAATCCCTCAC--CTCCCCCTAGTCCTCATTCCCTTG  780

seq1  CAGTAAGAACAAATGGTTCTGATGTTAAATTTCATGTTGGTTCTGATTTA  849
      |||||||| ||||||||||||||||||||||||||||||||| |||||||
seq2  CAGTAAGAGCAAATGGTTCTGATGTTAAATTTCATGTTGGTTGTGATTTA  830

seq1  TGAAAACAGAAGAATGAAAAAATGCACAGAATACAAAATATCAAATTTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAGAAGAATGAAAAAATGCACAGAATACAAAATATCAAATTTTC  880

seq1  CTT  902
      |||
seq2  CTT  883