BAC Information

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BAC

Clone NameB6Ng01-155L18
Chromosome3 (Build37)
Map Location 41,059,196 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155L18.bB6Ng01-155L18.g
ACCDH950434DH950435
length976839
definitionDH950434|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L18, 5' end.DH950435|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagctctttatatatattagatattcgtccc
ctatcagatttgggataggtaaagatcctttcccaatctgttggtggtcg
ttttgtcttattgacagtgtcttttgccttgcagaagctttgcaattttg
tgaggtcccatttattgattctcgaacttacagcacaagccattgctgtt
ctattcagaaaattttcccctgtacccatatctttgaggctttccccact
ttctcctctataagtttcagtgtctctggtttgtggagttccttaatcca
cttagatttgaccttagtacaaggagatagaaatgggtcaattcacattc
ttctacatgataaccgccaggtgtgccagcaccatttgttgaaaaggctg
tcttttttccactggatggttttagctcccctttcaaagataaagtgacc
ataggtgtgtgggttcatctctgggtcttcaattctcttccattggtcta
cttgtctgtcactatacgagtaccatgcagtttttatcacaattgctctg
tagtacagctttaggtcaggcatgatgattccaccagaggttcttttatc
cttgagaagagtttttgctatcctaggttttttgttattccagatgaatt
tgcagattgccctttctcattagttgaagaattgagttggaattttgata
gggattgcattgaatctgtagattgcttttggcaagatagccatttttac
aatgttgatcctgccaatccatgagcatggtagatctttccatcttctga
gatcttctttaatttctttcttcagagacttgaagttcttttcatacaga
tcttcacttccttagttagagtcacaccaatgtatttatatatttgtgac
tatagaggtgtgtttctctattcttt
gaattctttgtttagctctaccccatttttaatagggttatttggttctc
tggagtctaacttctcgagttctttgtatatattagatactagttctata
tcggatttaggattgctaaaggtcttttcccaatctgttggttgcctttt
tgttttattgacagtgtcctttgccttacagaagctttgcaattttatga
ggtcccatttgtcaattcttgagtttaaagcagaagacattggtgttctg
ttcaggattttttccccccatgcccatatgttccaggatctttcctacct
tctcctctataagttgcagtgtctctggatttacgtgcagatcctctact
tggggatccatcccatctataaccaacaaccccacccactattgtgattg
ctaacaggagcttgctgacaggagcctgatgtacctgtctcctgagaggc
tctgccagtgcttgacaaatacagaagtggatagtcacggtcatccattg
gactaaacatagggtctccaatgaaggatctagagaaagtactgaaggag
gtgcaggggtttgcaaccctatagaaggaccaacaatattaactaatcag
tatccccagagctccctgggcctaaaccaccaatcaaaaacaaacaaaca
aacaaacaaaaaaaacaaaaagaaaaacaaaaaacaaaaacatggtggga
ctcttggctctaactacatatgtagcagatgatggcctagtcagtcatca
atgggaggataggcccttggttctgtgaatgttctatgccccagtataag
gaatgccagagccaggaggtgggagtgggtgggttagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059196_41059737
seq2: B6Ng01-155L18.b_45_583 (reverse)

seq1  GAATAGAATTGAAGACTCAGAAACGAATCCACACACCTATGGTCACTTGA  50
      ||| |||||||||||| |||| | ||| |||||||||||||||||||| |
seq2  GAAGAGAATTGAAGACCCAGAGATGAACCCACACACCTATGGTCACTTTA  50

seq1  TCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTC  100
      |||| || | |||||||||||||||||||||||||||||||||| |||||
seq2  TCTTTGAAAGGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCCTTTTC  100

seq1  AACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAAT  150
      ||||||||||||||||||| ||||  ||||||||||||||||||| ||||
seq2  AACAAATGGTGCTGGCACACCTGGCGGTTATCATGTAGAAGAATGTGAAT  150

seq1  TGATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGG  200
      ||| ||| | ||||||||||||||||||||||||||||||||||| ||||
seq2  TGACCCATTTCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGG  200

seq1  AACGCCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGG  250
      ||| ||||   |||||||||||||||||||||||||||||||||||||||
seq2  AACTCCAC---AAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGG  247

seq1  AAAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGC  300
       |||||||  |||||||||  ||||||||||| || ||| ||||||||||
seq2  -AAAGCCTCAAAGATATGGGTACAGGGGAAAATTTTCTGAATAGAACAGC  296

seq1  AATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGACCTCATGAAAC  350
      |||||||||||||||||| | ||||||  | |||||||||||||  ||| 
seq2  AATGGCTTGTGCTGTAAGTTCGAGAATCAATAAATGGGACCTCACAAAAT  346

seq1  TGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG-GCA  399
      |||||||||||||||||||||||||||| ||||||||||||||| |  ||
seq2  TGCAAAGCTTCTGCAAGGCAAAAGACACTGTCAATAAGACAAAACGACCA  396

seq1  CCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACT  449
      |||||||||||||||||||||||||||||||| ||||| |||||||||| 
seq2  CCAACAGATTGGGAAAGGATCTTTACCTATCCCAAATCTGATAGGGGACG  446

seq1  AATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAA  499
      |||||| ||||||||| |||| |||||||||||||| |||||||||||||
seq2  AATATCTAATATATATAAAGAGCTCAAGAAGGTGGACTCCAGAAAATCAA  496

seq1  ATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  542
      ||||||||||||||||||||||||||||||| |||||||||||
seq2  ATAACCCCATTAAAAAATGGGGCTCAGAGCTGAACAAAGAATT  539