BAC Information

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BAC

Clone NameB6Ng01-155N19
Chromosome3 (Build37)
Map Location 57,772,233 - 57,773,248
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666585, Tm4sf1, LOC383862, Tm4sf4, Wwtr1, Commd2, Gm410, EG623114, Rnf13, LOC675537, Pfn2
Downstream geneEG433594, LOC100040216, 4921539H07Rik, Tsc22d2, D3Ucla1, Eif2a, 2810407C02Rik, 4932431H17Rik, LOC666680, LOC100040251, Siah2, LOC100040293, Clrn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155N19.g
ACCDH950523
length1,013
definitionDH950523|Mus musculus domesticus DNA, BAC clone: B6Ng01-155N19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacattgcctacatttctagtttgatgggttcctttggcttggac
ttgagtttaaattttacctctccttatttgttgtgactccctttccccga
ctataaagtggtagcagtaatatctgatttacagggttatgaggaggatt
gagtgagacacttcagtgagcattaactacctataatttcctgatgcata
aatgttcatagctacatgctcgagcatagtgaacagaacagagtgtaata
agcagtgagtatcattcttggcactcgctacgactcccccaatcccactg
gagcacacttagggcgacctctggaaggataagttgacctgggaagtgag
gaaaattactcacctcccaaaggtgcttgtcaccaaccttgggacaagct
tctttgattcctgcaaattgtcctctgacctctacatgtgtgcagtatca
cccccccacccccaacactgtcacacacaaataatgtgacaacaaacttt
tagtagaccctggaatcaacagattcaacagggggaaaatgattgggttt
ttgcactacatcctacaaacacgagaaaaataaacacttcaactgtttag
atctcataactactggtggacatgagtctagggtgactgagccattctaa
cttgcacaggctgtgtctataagaaggtcaaattctaagtcttttccggg
ggcatctccagacatggcatttgaaggatgaattagctgtaaatccagat
ctgaggaaacacaaagacccgaggagtggctttcaaccttagattccact
ggcgtggttatgctagtagctgcctgttgaggctgaagcaagtcacctgt
aagaaatagggcttctacttcctggaatgtggagatgtcctttaccttac
tattatgtcctcatctgaaacaggaaacatgacatccctaaatgctagcc
ccaacattatgaccaacaggataaatccctactcctccctttcttctctt
aagactggaggaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_57772233_57773248
seq2: B6Ng01-155N19.g_68_1080 (reverse)

seq1  TTCCTCCAGTCTTAAGAGATGAAAGGAGGAAGTGAGGAATTTATCCTGTT  50
      ||||||||||||||||||| ||||||  | ||| ||| ||||||||||||
seq2  TTCCTCCAGTCTTAAGAGAAGAAAGGGAGGAGT-AGGGATTTATCCTGTT  49

seq1  GCTCATAATGTTGTGGCTATAATTTAGGGATGTCATGACTCATGTGTAGA  100
      | ||||||||||| |||||  ||||||||||||||||  || ||| |   
seq2  GGTCATAATGTTGGGGCTAGCATTTAGGGATGTCATGTTTCCTGTTTCAG  99

seq1  ATGGTGACCATAATAGTATGGGAAAGGACATCTTCCACATTCCA-GAAGA  149
      |||  || |||||||||| || |||||||||| ||||||||||| |||| 
seq2  ATGAGGA-CATAATAGTAAGGTAAAGGACATC-TCCACATTCCAGGAAGT  147

seq1  AGAAGCCCTATTTCTTACAGCTAAGTTGCTTCAGCCTCCACAGGCAGCTA  199
      |||||||||||||||||||| | | ||||||||||||| |||||||||||
seq2  AGAAGCCCTATTTCTTACAGGTGACTTGCTTCAGCCTCAACAGGCAGCTA  197

seq1  CTAGCATAACCA-GGCAGTGGAAACTAAGGGTTGAAAGCCACTCCTCCTG  248
      |||||||||||| | |||||||| |||| ||||||||||||||||||  |
seq2  CTAGCATAACCACGCCAGTGGAATCTAA-GGTTGAAAGCCACTCCTCGGG  246

seq1  TCTTTGTGTTTCCTCATATCTGGATTCTACAACTAATTCATCCTTCAAAT  298
      |||||||||||||||| ||||||||| |||| ||||||||||||||||||
seq2  TCTTTGTGTTTCCTCAGATCTGGATT-TACAGCTAATTCATCCTTCAAAT  295

seq1  GCCATGTCTGGAGATG-CCCCGGAAAAGGCTTAGAGCTTGGCCTTCTTAT  347
      |||||||||||||||| ||||||||||| ||||||  ||| |||||||||
seq2  GCCATGTCTGGAGATGCCCCCGGAAAAGACTTAGAATTTGACCTTCTTAT  345

seq1  AGACACAGCCTGGGCAAGTTAGAATGGCTCAGTTACCCTAGACCCATGTC  397
      |||||||||||| |||||||||||||||||||| ||||||||| ||||||
seq2  AGACACAGCCTGTGCAAGTTAGAATGGCTCAGTCACCCTAGACTCATGTC  395

seq1  CACCAGTAGTTATGAGATCTAAACAGTTGAAGTGTTTATTTTTCTCGTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTAGTTATGAGATCTAAACAGTTGAAGTGTTTATTTTTCTCGTGT  445

seq1  TTGTAGGATGTAGTGCAAAAACCCAATCATTTTCCCCATCTTTAATCTGT  497
      ||||||||||||||||||||||||||||||||||||| | || |||||||
seq2  TTGTAGGATGTAGTGCAAAAACCCAATCATTTTCCCCCTGTTGAATCTGT  495

seq1  TGATTCCAGGGTCTACTAAAAGTTTGTTGTCACATTATTTGTGTGTGACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCAGGGTCTACTAAAAGTTTGTTGTCACATTATTTGTGTGTGACA  545

seq1  GTGTTGGGGGTGGGGGGCTGCTACTGCACACATGTCGAGGTCAGAGGACA  597
      ||||||||||||||||| || |||||||||||||| ||||||||||||||
seq2  GTGTTGGGGGTGGGGGGGTGATACTGCACACATGTAGAGGTCAGAGGACA  595

seq1  ATTTGCAGGAATCAAAGAAGCTTGTCCCAAGCTTGGTGACAAGCACCTTT  647
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTTGCAGGAATCAAAGAAGCTTGTCCCAAGGTTGGTGACAAGCACCTTT  645

seq1  CTGAGCTGAGTAATTTTCCTCACTTCCCAGGTCAACTTATCCTT-AAGAC  696
        ||| ||||||||||||||||||||||||||||||||||||||  ||| 
seq2  GGGAGGTGAGTAATTTTCCTCACTTCCCAGGTCAACTTATCCTTCCAGA-  694

seq1  CCACTGCCCTAAGTGTGCTCCAGTGGGATTGTGGGAGCTGTAGTGAGTGC  746
           |||||||||||||||||||||||||| |||||  |||| ||||||
seq2  -GGTCGCCCTAAGTGTGCTCCAGTGGGATTGGGGGAGTCGTAGCGAGTGC  743

seq1  CCTGAATCTGACTCACAGCCTACTACACTCTGTTCTGTTCACTATGCTCC  796
      |  ||||   |||||| || || |||||||||||||||||||||||||| 
seq2  CAAGAATGATACTCACTGCTTATTACACTCTGTTCTGTTCACTATGCTCG  793

seq1  TGCATGTAGCTATGAACATTTATGCATCAGGAAATTCTAGGTACTTAATG  846
       ||||||||||||||||||||||||||||||||||| |||||| ||||||
seq2  AGCATGTAGCTATGAACATTTATGCATCAGGAAATTATAGGTAGTTAATG  843

seq1  CTCACTGAAGTGTCTCACTCAATCCTTACTATAACCCTGTAAATCAGATA  896
      ||||||||||||||||||||||||||    ||||||||||||||||||||
seq2  CTCACTGAAGTGTCTCACTCAATCCTCCTCATAACCCTGTAAATCAGATA  893

seq1  TTACTGTTACCACTTTATAGTTGGGGAAACTGAGTCACAACAAATAAGGA  946
      |||||| |||||||||||||| |||||||  |||||||||||||||||||
seq2  TTACTGCTACCACTTTATAGTCGGGGAAAGGGAGTCACAACAAATAAGGA  943

seq1  GAGGTAAAATTTAAACTCAAGTCCAAGTCAAAGGAACTGATCAAACTAGA  996
      ||||||||||||||||||||||||||| |||||||||  |||||||||||
seq2  GAGGTAAAATTTAAACTCAAGTCCAAGCCAAAGGAACCCATCAAACTAGA  993

seq1  AATGTTGACAATGTGAATTC  1016
      ||||| | ||||||||||||
seq2  AATGTAGGCAATGTGAATTC  1013