BAC Information

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BAC

Clone NameB6Ng01-155O22
Chromosome3 (Build37)
Map Location 108,528,443 - 108,688,857
singlet/doubletdoublet
Overlap gene4921525H12Rik, Stxbp3a, Fndc7
Upstream geneCsf1, LOC280047, Eps8l3, Gstm5, LOC671031, Gstm7, Gstm6, LOC668674, Gstm3, LOC624701, Gstm2, Gstm1, LOC100043641, Gstm4, Ampd2, Gnat2, Gnai3, Gpr61, LOC100043654, Amigo1, Cyb561d1, Atxn7l2, Sypl2, LOC668686, Psma5, Sort1, Mybphl, Psrc1, Celsr2, Sars, 5330417C22Rik, 1700013F07Rik, 2010200O16Rik, Taf13, Wdr47, LOC100043166, Clcc1, Gpsm2
Downstream genePrpf38b, 4921515J06Rik, B430201A12Rik, 4930443G12Rik, Slc25a24, Vav3, Ntng1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155O22.bB6Ng01-155O22.g
ACCDH950572DH950573
length661402
definitionDH950572|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O22, 5' end.DH950573|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,528,443 - 108,529,103)(108,688,450 - 108,688,857)
sequence
gaattctttctattctcagtggttacactccacctcaaatatttgtcacg
gatgcttaccagacattggcctttgaaccagcatgacctctgtagggcct
gtatctcactgatggaaagacctaagtacgttttttttgttttttttgtt
ttttttttgctatgtgttactctggcggtgctggtgtgtgctatatagca
catactgactttaaaattaccaaaatcctcacatctcagccctggtggaa
gccactatcaagataaatctcacttctcaagaagccaggtctagtcaccc
tacagatagatactcttggcttccaaattgatgagtcctatatcttgtag
gttcaaccacttgtgtattgagttaccattcatatctagacttgtaatta
tttcacagaaaacatagtgcagcaactgctcgtgggccatgtggtggttt
gaatgagaatggcccccataggctcatagatttgaatacttggtccccag
ttagtggaagtgtttgggaaggatttaggaggtgtggccttgttagagga
ggtgtgtcactgagggtggtttttgatgttccagaatcctatgccattcc
cagttactgttctctctctctctctctctctctctctctctccatccccc
tcctcctctct
tcttgactactgggacagaaagagaaggttggctgtattgggtacctagg
gatttggctaaggggaggccaggaagagtggatgtcggcaaatcacttgg
cttgtatcccgtcttcttgtcctatatataattttgcccttaatcgcttt
atttggttggtttggggaagttggttggctgattggtttgggtttctttg
gttgttttttgagacggggttacaaataggctagtcttctccaactccct
aagtagttgactgagcctgacctttcagtacccccacccccaccccctgg
gattgcagatgcacgttctatacctggctttggtatgtttttgtttgttt
gtttgtttgtttgtttgtttgtttcgagataggatctctgaaactcattt
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_108528443_108529103
seq2: B6Ng01-155O22.b_47_707

seq1  GAATTCTTTCTATTCTCAGTGGTTACACTCCACCTCAAATATTTGTCACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTATTCTCAGTGGTTACACTCCACCTCAAATATTTGTCACG  50

seq1  GATGCTTACCAGACATTGGCCTTTGAACCAGCATGACCTCTGTAGGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTACCAGACATTGGCCTTTGAACCAGCATGACCTCTGTAGGGCCT  100

seq1  GTATCTCACTGATGGAAAGACCTAAGTACGTTTTTTTTGTTTTTTTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTCACTGATGGAAAGACCTAAGTACGTTTTTTTTGTTTTTTTTGTT  150

seq1  TTTTTTTTGCTATGTGTTACTCTGGCGGTGCTGGTGTGTGCTATATAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGCTATGTGTTACTCTGGCGGTGCTGGTGTGTGCTATATAGCA  200

seq1  CATACTGACTTTAAAATTACCAAAATCCTCACATCTCAGCCCTGGTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGACTTTAAAATTACCAAAATCCTCACATCTCAGCCCTGGTGGAA  250

seq1  GCCACTATCAAGATAAATCTCACTTCTCAAGAAGCCAGGTCTAGTCACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTATCAAGATAAATCTCACTTCTCAAGAAGCCAGGTCTAGTCACCC  300

seq1  TACAGATAGATACTCTTGGCTTCCAAATTGATGAGTCCTATATCTTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAGATACTCTTGGCTTCCAAATTGATGAGTCCTATATCTTGTAG  350

seq1  GTTCAACCACTTGTGTATTGAGTTACCATTCATATCTAGACTTGTAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACCACTTGTGTATTGAGTTACCATTCATATCTAGACTTGTAATTA  400

seq1  TTTCACAGAAAACATAGTGCAGCAACTGCTCGTGGGCCATGTGGTGGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGAAAACATAGTGCAGCAACTGCTCGTGGGCCATGTGGTGGTTT  450

seq1  GAATGAGAATGGCCCCCATAGGCTCATAGATTTGAATACTTGGTCCCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGAATGGCCCCCATAGGCTCATAGATTTGAATACTTGGTCCCCAG  500

seq1  TTAGTGGAAGTGTTTGGGAAGGATTTAGGAGGTGTGGCCTTGTTAGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGAAGTGTTTGGGAAGGATTTAGGAGGTGTGGCCTTGTTAGAGGA  550

seq1  GGTGTGTCACTGAGGGTGGTTTTTGATGTTCCAGAATCCTATGCCATTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTCACTGAGGGTGGTTTTTGATGTTCCAGAATCCTATGCCATTCC  600

seq1  CAGTTACTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCCCCC  650

seq1  TCCCCCTCTCT  661
      ||| |||||||
seq2  TCCTCCTCTCT  661

seq1: chr3_108688450_108688857
seq2: B6Ng01-155O22.g_70_477 (reverse)

seq1  CCAAATGAGCTACAGAGATCCTATCTCAAAACAAACAAACAAACAAACAA  50
      ||||||||| | ||||||||||||||| ||||||||||||||||||||||
seq2  CCAAATGAGTTTCAGAGATCCTATCTCGAAACAAACAAACAAACAAACAA  50

seq1  ACAAACAAACAAAAACATACCAAAGCCAGGTATAGAACGTGCATCTGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAAAACATACCAAAGCCAGGTATAGAACGTGCATCTGCAA  100

seq1  TCCCAGGGGGTGGGGGTGGGGGTACTGAAAGGTCAGGCTCAGTCAACTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGGGTGGGGGTGGGGGTACTGAAAGGTCAGGCTCAGTCAACTAC  150

seq1  TTAGGGAGTTGGAGAAGACTAGCCTATTTGTAACCCCGTCTCAAAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAGTTGGAGAAGACTAGCCTATTTGTAACCCCGTCTCAAAAAACA  200

seq1  ACCAAAGAAACCCAAACCAATCAGCCAACCAACTTCCCCAAACCAACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGAAACCCAAACCAATCAGCCAACCAACTTCCCCAAACCAACCAA  250

seq1  ATAAAGCGATTAAGGGCAAAATTATATATAGGACAAGAAGACGGGATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCGATTAAGGGCAAAATTATATATAGGACAAGAAGACGGGATACA  300

seq1  AGCCAAGTGATTTGCCGACATCCACTCTTCCTGGCCTCCCCTTAGCCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGTGATTTGCCGACATCCACTCTTCCTGGCCTCCCCTTAGCCAAA  350

seq1  TCCCTAGGTACCCAATACAGCCAACCTTCTCTTTCTGTCCCAGTAGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGGTACCCAATACAGCCAACCTTCTCTTTCTGTCCCAGTAGTCAA  400

seq1  GAGAATTC  408
      ||||||||
seq2  GAGAATTC  408