BAC Information

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BAC

Clone NameB6Ng01-156B14
Chromosome3 (Build37)
Map Location 77,956,166 - 77,957,221
singlet/doubletsinglet
Overlap genenone
Upstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479
Downstream geneLOC100041691, LOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156B14.bB6Ng01-156B14.g
ACCDH950694DH950695
length1,0851,127
definitionDH950694|Mus musculus domesticus DNA, BAC clone: B6Ng01-156B14, 5' end.DH950695|Mus musculus domesticus DNA, BAC clone: B6Ng01-156B14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagcatatatgaaaaccaaatatagtaaattggatggctagag
cagaaaaatgacacgcaatgcacaagtggctagtgaatactggaaacaaa
tcttgacatactgtgtcctcagaaaactgcaaccctgccatctggaaatc
atccttttgatccagggatgggagaagagacatgaaatgaatgacttggg
ttttctaggcattgacctttgtggtcttgatcaagagaggtcacagtata
ttagctttatcctacttggatatgtgcccagtggctttggtgaaacatcc
tttttgtacttgtcaataatttctcagctttaaattgccttcaaaattag
ctagtgctaaaattattaggttagataaaatacttagtgattttcataga
acgtagtaaattttacttaactttctctttctgtctttctctttatccct
cactctttctctgtcttcctctctctcttaatcagatcaatcatgaaata
taagaaaatatgtaggtaataaggtattcttatttaggaaatttttgatc
acactaagatcttaaacactgtgtgcttgcaaaagtggattagctttttt
tttaattaatatttttattacatattttcctcaattacatttccaatgct
atcccaaaagtcccccatacccttcccccacttccctacccactcattcc
cattttttttttttttggccctagcgttcctctgtactggggcatataca
gtttgcatgtccaatgggcctctctttccagtgatggccaactaggccat
cttttgatacatatgcagctagagtcaagagctccggggtactggttagt
tcataatgttgttccacctatatggttgcagatcctttagctccttgggt
acttttctctagctcctccattgggagccctatgatccatccaatagctg
agtgtgagcatccacttctgtgtttgctagcccggcatagtctcacaaga
gaaagctacatctgggtcctttcgataatcttgctagtgatgcatgtgtc
accgtttggaagctgatatggggtggatcctggat
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggactgggcgaagtg
ggcgttctgggttctgatgctggtgagtggtcctggtttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcaa
tcagcaggcgtgggagacaagctctctcctctgagtttcagtggtcagag
cagtctctgcaggcaagctctcctctttcggggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatttt
cccagaagctgtgttgctttggccaggaaggtggcctgttgtctggagtc
gaagatgtcaccgcctcagaagctctgtggctctcgccaggaaggtggct
ggccgtctggagccgaagatggcgccacctcagaagctctgtggctctag
ccaggaaggtggctggttgtctggagccgaagatggcgccgccccagaag
ctctgcgactctcgccagtaccagaaacggctggcctctgtattccacac
ggtcacccgtgcagcctgcccttcgcggagtcctggagccaagaaggctc
cagccggggcctgtggcacaaacctctcaggccgggcagacccccgtgct
ctcaccaggaaggtggccggctgtctcttctttttttttttaactttgta
ttttctttgactattatttcagtatcctcttggtatcttctacacctgag
attctctcttctctcttgtattgtgttggtgaatattgcatctgtgatcc
tgatctctttccttgggtttccatctccacggtgtctctctttgtgtttt
cttcactgtttctatttccatttagattctggacagttttttcaaattct
tcacctggttgatgtgtttccttggtctttttagggactctatttgtttc
ttctgaggaattacctatttacccgtggttctaacgtatatcctaagaga
gtatattatgtgtcctacctcataggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77956166_77957221
seq2: B6Ng01-156B14.b_88_1134 (reverse)

seq1  ATCCAGGGATCCACCCCATAATCAGCTTCCAAACGCTGACACCATTGCAT  50
      ||||| ||||||||||||| ||||||||||||||| ||||||   |||||
seq2  ATCCA-GGATCCACCCCAT-ATCAGCTTCCAAACGGTGACAC--ATGCAT  46

seq1  ACACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTTGTGA  100
       |||||||||||  ||||||||||||||||||||||||| ||||||||||
seq2  -CACTAGCAAGA--TTATCGAAAGGACCCAGATGTAGCTTTCTCTTGTGA  93

seq1  GACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACACTCAGCTA  150
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  GACTATGCCGGG--CTAGCAAACACAGAAGTGGATGCTCACACTCAGCTA  141

seq1  TTGGATGGATCATAGGGCTCCCAATGGAGGAGCTAGAG-AAAGTACCCAA  199
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTGGATGGATCATAGGGCTCCCAATGGAGGAGCTAGAGAAAAGTACCCAA  191

seq1  GGAGCTAAAAGGATCTGCAACCATATAGGTGGAACAACATTATGAACTAA  249
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCT-AAAGGATCTGCAACCATATAGGTGGAACAACATTATGAACTAA  240

seq1  CCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGC  290

seq1  CTAGTTGGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTGTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTGTAT  340

seq1  ATGCCCCAGTACAGGGGAACGCTAGGGCCAAAAAAAAAAAAAATGGGAAT  399
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGCCCCAGTACAGAGGAACGCTAGGGCCAAAAAAAAAAAAAATGGGAAT  390

seq1  GAGTGGGTAGGGAAGTGGGGGAAGGGTATGGGGGACTTTTGGGATAGCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGTAGGGAAGTGGGGGAAGGGTATGGGGGACTTTTGGGATAGCAT  440

seq1  TGGAAATGTAATTGAGGAAAATATGTAATAAAAATATTAATTAAAAAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATGTAATTGAGGAAAATATGTAATAAAAATATTAATTAAAAAAAA  490

seq1  AGCTAATCCACTTTTGCAAGCACACAGTGTTTAAGATCTTAGTGTGATCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATCCACTTTTGCAAGCACACAGTGTTTAAGATCTTAGTGTGATCA  540

seq1  AAAATTTCCTAAATAAGAATACCTTATTACCTACATATTTTCTTATATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTCCTAAATAAGAATACCTTATTACCTACATATTTTCTTATATTT  590

seq1  CATGATTGATCTGATTAAGAGAGAGAGGAAGACAGAGAAAGAGTGAGGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTGATCTGATTAAGAGAGAGAGGAAGACAGAGAAAGAGTGAGGGA  640

seq1  TAAAGAGAAAGACAGAAAGAGAAAGTTAAGTAAAATTTACTACGTTCTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGAAAGACAGAAAGAGAAAGTTAAGTAAAATTTACTACGTTCTAT  690

seq1  GAAAATCACTAAGTATTTTATCTAACCTAATAATTTTAGCACTAGCTAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCACTAAGTATTTTATCTAACCTAATAATTTTAGCACTAGCTAAT  740

seq1  TTTGAAGGCAATTTAAAGCTGAGAAATTATTGACAAGTACAAAAAGGATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGCAATTTAAAGCTGAGAAATTATTGACAAGTACAAAAAGGATG  790

seq1  TTTCACCAAAGCCACTGGGCACATATCCAAGTAGGATAAAGCTAATATAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCAAAGCCACTGGGCACATATCCAAGTAGGATAAAGCTAATATAC  840

seq1  TGTGACCTCTCTTGATCAAGACCACAAAGGTCAATGCCTAGAAAACCCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCTCTCTTGATCAAGACCACAAAGGTCAATGCCTAGAAAACCCAA  890

seq1  GTCATTCATTTCATGTCTCTTCTCCCATCCCTGGATCAAAAGGATGATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCATTTCATGTCTCTTCTCCCATCCCTGGATCAAAAGGATGATTT  940

seq1  CCAGATGGCAGGGTTGCAGTTTTCTGAGGACACAGTATGTCAAGATTTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGGCAGGGTTGCAGTTTTCTGAGGACACAGTATGTCAAGATTTGT  990

seq1  TTCCAGTATTCACTAGCCACTTGTGCATTGCGTGTCATTTTTCTGCTCTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTATTCACTAGCCACTTGTGCATTGCGTGTCATTTTTCTGCTCTA  1040

seq1  GCCATCC  1056
      |||||||
seq2  GCCATCC  1047