BAC Information

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BAC

Clone NameB6Ng01-156C05
Chromosome3 (Build37)
Map Location 41,059,224 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156C05.bB6Ng01-156C05.g
ACCDH950723DH950724
length1,0091,223
definitionDH950723|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C05, 5' end.DH950724|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
tactggagtccaccttcttgagttctttttatatattggacattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgacttgcagtggctttgcaatttta
tgacatcccatttgtcgattatcgatcttacagcacaagacattgctgtt
ctattcaggactttttcccctgtacccatatcttcgaggcttttctctac
ttactcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagatagaaatggatcaattgca
ttcttctacatgataaccgccagttgtgccagcaccatttgttgaaaatg
ctgtctttttaccactggatggtttttgctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctatcccattggt
ctacttgtctgtcactataccagtaccatgcagtttttatcacaattgct
ctgtagtagagctttaggtcaggcatggtgattccaccagaggttccttt
atccttgagaagagtttttgctatcctaggttttttgatattccagataa
atttgcagattgccctttctaattcattgaagaattgagttggaattttg
atagggattgcattgaatctgtagattgcttttggcaagatagccatttt
tactatattgatcctgccaatccatgagcatgggagatctttctatcttc
tgagatcttctttaaattctttcttcagagacttgaagttcttatcatac
agatctttcacttccttacacagagtcacaccaaggtattttatattatt
tgtgactattgagaacggtgttgtttccctaatttctttctcagccagtt
tattctttt
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttggtcaagatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcttaggttttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacttggtatctgtccagaaatttgtccatttcgtccatattttcca
gttttgttgagtataagcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctttgccctctagtgagtctagctaagggcttatcta
tcttgttgattttctcaaagaaccaattcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctacttcctcttgggtgaatttgcttcctttttttctaga
gctttagatgtgtgtcaagctgctagtatgtgctctctcccgtttcttct
tggaggtactcagagctatgagttttccctctagaaatgcctttcattgt
gtcccaaaggttgggtacgtgtggcttcattttcattaactctaaaagtc
ttatttccttcttattctttctgaccagaaccatggaagaggttgttcag
ttcactgtaaagttgctttcctcttatgttgttatgagacagctctaggc
accgggctgaaggaactggacaattcaatccggacgctggagagctcttg
ttgatcatactaataagtgcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059224_41059737
seq2: B6Ng01-156C05.b_46_559 (reverse)

seq1  CCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCA  50
      |||||||||||||||||||||||||| ||||||||||| |||||||||||
seq2  CCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCAAAAACCATCCA  50

seq1  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGT  100
      |||| |||||||||||||||||||||||||||||||||||||||||  ||
seq2  GTGGTAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGCGGT  100

seq1  TATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAG  150
      |||||||||||||||||| |||||||||| | ||||||||||||||||||
seq2  TATCATGTAGAAGAATGC-AATTGATCCATTTCTATCTCCTTGTACTAAG  149

seq1  GTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAA  200
      ||||||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  GTCAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACACTGAA  199

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGG  250
      ||||||||||||| |||| | ||||||||| ||||||||||  |||||||
seq2  ACTTATAGAGGAGTAAGTAGAGAAAAGCCTCGAAGATATGGGTACAGGGG  249

seq1  AAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATA  300
      ||||| ||||| |||||||||||||| ||||||||||||||| || ||| 
seq2  AAAAAGTCCTGAATAGAACAGCAATGTCTTGTGCTGTAAGATCGATAATC  299

seq1  GACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACAC  350
      |||||||||||  |||| ||| ||||||||  ||||||| ||||||||||
seq2  GACAAATGGGATGTCATAAAATTGCAAAGCCACTGCAAGTCAAAAGACAC  349

seq1  CGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCT  399
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCT  399

seq1  ATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAG  449
      ||||||||||||||||||||||||| |||||||||||  |||||||||||
seq2  ATCCTAAATCAGATAGGGGACTAATGTCCAATATATAAAAAGAACTCAAG  449

seq1  AAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGA  499
      |||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  AAGGTGGACTCCAGTAAATCAAATAACCCCATTAAAAAATGGGGCTCAGA  499

seq1  GCTAAACAAAGAATT  514
      |||||||||||||||
seq2  GCTAAACAAAGAATT  514