BAC Information

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BAC

Clone NameB6Ng01-156F18
Chromosome3 (Build37)
Map Location 125,451,562 - 125,452,636
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668820, Ndst4
Downstream geneUgt8a, Arsj, Camk2d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156F18.bB6Ng01-156F18.g
ACCDH950884DH950885
length1,1601,082
definitionDH950884|Mus musculus domesticus DNA, BAC clone: B6Ng01-156F18, 5' end.DH950885|Mus musculus domesticus DNA, BAC clone: B6Ng01-156F18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctagagtccaccttcttgagttctttagatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtgacct
ttttgtcttattgacagtgtcttttgccttacagaagctttgcagtttca
tgaggtcccatttgtcaattctcaatcttacaacacaagccattgcagtt
ctattcaggaatatttcccctgtgcccatatcttcgaggcttttcccact
ttctcctctataagtttcagtgtctctggttttatgtggagctccttgat
ccacttagatttgaccttagtacatagagataggaatggatcaattcaca
ttcttctacatgttaacaaccagttgtgccagcatcatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaaatg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtcattataccagtaccatgcagtttttattacaattcct
ctgtagtaaagctttaggtcaggcatcgtgattccaccagaggttctttt
atcctttagaagagtttttgctatcctaggttttttgttattccagatga
atttgcagattgctccttctaattcattgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatcattccatcttc
tgagatcttctttaatttctttcttcagagacttgaagttcttatcatac
aggtctttcactttccttagttagagtcacacaagatattttatatgatt
gtgactattgagaagggtgttgtttccctaatttctttctcagcctgtta
ttctttgtgaaaggaagacatgacctgttgaatacttttaattcagctac
ttcctgatgctgttatcaggttaggagtctctggggaaatttaagggcac
attaatactatcaatgcacctgcaaaagtaatcttggatcctcggtccat
ggttccttta
gaattcattcacatgaattttacaggtatgtttctttttaatacatggtt
ttcaaagtctagctttttccattcaacaattaaaatttgataatatctgc
cagtaataataaaatcattaatatgcctggattaggtttcagttaaaatt
ttgtatgaatagatgagaataagtctggaagttcattatagaagaacatg
ttcctgaatagatttcaataagtaaatccataaggaattatgtaatataa
atttactctgttttatttgcttcatatattataatgaacttttaaagata
ttgatgtttggaactggagagttggctcagcaattaagaacattggctgc
tattctggaatacccagagtagatacccatctgcacactgtgactcacac
ctacctgcaagttcagttcttgggaaccaaacatcctcttttggccaaag
ttggcaagaggtatacaagtggtgcacagatatttgtaggcaaaacaccc
atacaggtaaaatcaaaattaaatctaaacaaaataatacaatgaaaaag
aattttggttacataaggagaagtgaaagaatcataaatctttatttcac
ttatttttccattcagaaaactaagagaaatctaagaattaaaaataatt
atctgaagctggggaatggagatttacacctttaaacccaacacttggga
ggcagaaacaggcagagctctgagtttgaggccagcctgggtctataacg
tgagttacaaggggttacaaagagagacctgatctcaaacaaaaacaaaa
acaaagaaaaaacaaatgaaaccaaaccatgcatccaaacaaacaaatac
taattatttaaagaagctcagaactcaagaaggtggactccagaaatcaa
ataatcacatcaaaaatggggctcagaactaaacaaagaattctgacgtg
aggatactaagtggctgagagcacctgaaaaatgttcagcatctagcatc
agggaatgcaaatcaaaacatcctggagatcacctcacaacagtcaggat
ggctagaatcaaaatcaggtgacagcgatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_125451562_125452636
seq2: B6Ng01-156F18.g_86_1146 (reverse)

seq1  AGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTG  50
      |||||| ||||||||||||  |||||||  ||||||| ||||||| ||||
seq2  AGCATC-GCTGTCACCTGA--TTTTGATTCTAGCCATCCTGACTGTTGTG  47

seq1  AGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGGCTAAGGA  100
      |||||  |||||  || |||||||||||||| ||||||||| ||||  ||
seq2  AGGTG--ATCTCCAGGATGTTTTGATTTGCA-TTCCCTGAT-GCTA--GA  91

seq1  TGCTGAACATTTTTTCAGGTGCTTCTCAGCCACTTAGTATTCCTCACGTC  150
      ||||||||| |||||||||||| |||||||||||||||| ||||||||||
seq2  TGCTGAACA-TTTTTCAGGTGC-TCTCAGCCACTTAGTA-TCCTCACGTC  138

seq1  AGAATTCTTTGTTTAGTTCTGAGCCCCATTTTTTGATGTGATTATTTGAT  200
      |||||||||||||||||||||||||||| |||||||||||||||||||| 
seq2  AGAATTCTTTGTTTAGTTCTGAGCCCCA-TTTTTGATGTGATTATTTGA-  186

seq1  TTTCTGGAGTCCACCTTCTTGAGTTCTGAGCTTCTTTAAAATAATTAGTA  250
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTCTGGAGTCCACCTTCTTGAGTTCTGAGCTTCTTT-AAATAATTAGTA  235

seq1  TTTTGTTTGTTTGGATGCATGGTTTGGTTTCATTTGTTTTTTCTTTGTTT  300
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTGTTTGTTTGGATGCATGGTTTGGTTTCATTTGTTTTTTCTTTGTTT  284

seq1  TTGTTTTTGTTTGAGATCAGGTCTCTCTTTGTAA-CCCTTGTAACTCACG  349
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTGTTTTTGTTTGAGATCAGGTCTCTCTTTGTAACCCCTTGTAACTCACG  334

seq1  TTATAGA-CCAGGCTGGCCTCAAACTCAGAGCTCTGCCTGTTTCTGCCTC  398
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGACCCAGGCTGGCCTCAAACTCAGAGCTCTGCCTGTTTCTGCCTC  384

seq1  CCAAGTGTTGGGTTTAAAGGTGTAAATCTCCATTCCCCAGCTTCAGATAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGTTGGGTTTAAAGGTGTAAATCTCCATTCCCCAGCTTCAGATAA  434

seq1  TTATTTTTAATTCTTAGATTTCTCTTAGTTTTCTGAATGGAAAAATAAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTAATTCTTAGATTTCTCTTAGTTTTCTGAATGGAAAAATAAGT  484

seq1  GAAATAAAGATTTATGATTCTTTCACTTCTCCTTATGTAACCAAAATTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAGATTTATGATTCTTTCACTTCTCCTTATGTAACCAAAATTCT  534

seq1  TTTTCATTGTATTATTTTGTTTAGATTTAATTTTGATTTTACCTGTATGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTGTATTATTTTGTTTAGATTTAATTTTGATTTTACCTGTATGG  584

seq1  GTGTTTTGCCTACAAATATCTGTGCACCACTTGTATACCTCTTGCCAACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGCCTACAAATATCTGTGCACCACTTGTATACCTCTTGCCAACT  634

seq1  TTGGCCAAAAGAGGATGTTTGGTTCCCAAGAACTGAACTTGCAGGTAGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCAAAAGAGGATGTTTGGTTCCCAAGAACTGAACTTGCAGGTAGGT  684

seq1  GTGAGTCACAGTGTGCAGATGGGTATCTACTCTGGGTATTCCAGAATAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCACAGTGTGCAGATGGGTATCTACTCTGGGTATTCCAGAATAGC  734

seq1  AGCCAATGTTCTTAATTGCTGAGCCAACTCTCCAGTTCCAAACATCAATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAATGTTCTTAATTGCTGAGCCAACTCTCCAGTTCCAAACATCAATA  784

seq1  TCTTTAAAAGTTCATTATAATATATGAAGCAAATAAAACAGAGTAAATTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAAGTTCATTATAATATATGAAGCAAATAAAACAGAGTAAATTT  834

seq1  ATATTACATAATTCCTTATGGATTTACTTATTGAAATCTATTCAGGAACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACATAATTCCTTATGGATTTACTTATTGAAATCTATTCAGGAACA  884

seq1  TGTTCTTCTATAATGAACTTCCAGACTTATTCTCATCTATTCATACAAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCTATAATGAACTTCCAGACTTATTCTCATCTATTCATACAAAA  934

seq1  TTTTAACTGAAACCTAATCCAGGCATATTAATGATTTTATTATTACTGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTGAAACCTAATCCAGGCATATTAATGATTTTATTATTACTGGC  984

seq1  AGATATTATCAAATTTTAATTGTTGAATGGAAAAAGCTAGACTTTGAAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTATCAAATTTTAATTGTTGAATGGAAAAAGCTAGACTTTGAAAA  1034

seq1  CCATGTATTAAAAAGAAACATACCTGT  1075
      |||||||||||||||||||||||||||
seq2  CCATGTATTAAAAAGAAACATACCTGT  1061