BAC Information

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BAC

Clone NameB6Ng01-156H03
Chromosome3 (Build37)
Map Location 72,589,354 - 72,590,477
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667385, LOC100041459
Downstream gene2010204N08Rik, Slitrk3, Bche
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156H03.bB6Ng01-156H03.g
ACCDH950948DH950949
length1,1161,212
definitionDH950948|Mus musculus domesticus DNA, BAC clone: B6Ng01-156H03, 5' end.DH950949|Mus musculus domesticus DNA, BAC clone: B6Ng01-156H03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttgcttaaggaaggaattagaatttaaccaaagatgtcattt
taggtagagaaaggatatagaaagttagtgggaaaggaaagaatatgata
aaaatatactatctcctgggcagagacactctctcaaaaacatatatata
tatatgtgagtgtgtgtgtgtttgtgtgtgtgcatatatatatacacata
tgtatacacatatatacatatacatacacatatatacatatatacatata
tatactatctgaacattcaaaacaatatttaaaaatttaataaaaaagta
attcttgctaatggaaatttgcataagactggaaataactttctgtatat
atatatatatattcatggtgagtactaggaacggaatctacctgagcact
ttggagaccatggaggattgtatacccatattttaaataaacaacactag
aatactgcagaaaaacattaaggacaataatgtattctttttaaaatgct
atgctgagagacgtcatgagatcacaaatatgttcttcagttggagtatc
aaattaaaacattatgatgttctacactttgttactaagattgtgtgtgt
atgacacagttgtattgcaatttcctcatagttccttgaaataaagtatc
aatatagcgtcttgtattcaaattaattaatgtttacatcacaacagtat
tagttcataattgtgatatctttactcaagtatctaaaatcggtggagga
ggagaaattgtagagacaacactgctgaccagcctttttaccaatgtaga
caaaagaagagagttacttcacaattgtttttaattcggtgtttacattt
tcgcttttcaacagtcattactcttttgaacatcaaattacctgtatagt
atctagtgaatacaacactttttctcaataagattttaattccccaataa
tattgtgctaatgtatactgaatctcctttagatgtcaggaggtattcaa
ctttgatgcttttatgactactagttactagaatattaactcatctctca
gagaacattaagatgaaagatcatcgtttttcataaaaaatacatttcga
acttaatttgttcaga
gaattctttatatatgttggatattagtcccctatctgatttaggatagg
taaagatcctttcccaatctgttggtggtctttttgtcttattgacggtg
tcttttgccttgcagaaactttggagtttcattaggtcccatttgtcaat
tctcgatcttacagcacaagccattgctgttctgttcaggaatttttccc
ctgtgcccatatcttcaaggcttttccccacattctcctctataagtttc
agtgtctctggttttatgtgaagttccttgatccacttagatctggaaat
cagtctggcggttcctcagaaaattggacatagtactaccagaggatcca
gcaatacctctcctgggcatatatccagaagatgccacaactggtaagaa
ggacacatgctccactatgttcatagcagccttatttataatagccagaa
gcaggaaagaacccagatgcccctcaacagaggaatggatacagaaaatg
tggtacatctacacaataaagtactactcagctattaaaaagaatgaatt
tatgaaattcctagccaaatggatggacctggagggcatcatcctgagtg
aggtaacacattcacaaaggaactcacacaatatgtactcactgataagt
ggatattagcccaaaacctaggatacccaagatataagatacaatttcct
aaactcatgaaactcaagaaaaatgaagactgaagtgtggacactatgcc
cctccttagaagtgggaacaaaacacccatggaaggagttacagagacaa
agtttggagctgagatgaaaggatggaccatgtagagactgccatatcca
gggatccaccccataatcagcatccaaacgctgacaccattgcatacact
agcaagattttatcgaaaggacccagatgtagctgtctcttgtgagacta
tgccggggcctagcaacacagaagtggatgctcacagcagctaatggatg
gatcacaggctcctaatgagagctagagaagtacccaaggagctaaaggg
atttgcacctataggtggaataacattatgaacttacagtacccgagctc
tggactccagcctgcatatgttcaaagaatgactagtcgcatcactggaa
gaggtcattggaaccgcaacttatgtccagtcacaggaagctctagtgta
ataaaaggtgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_72589354_72590477
seq2: B6Ng01-156H03.b_44_1159 (reverse)

seq1  TCTG-ACAATTTAAGTTTGAAATGTATTTTTTATAGAAAACTGATGATCT  49
      |||| |||| ||||||| |||||||||||||||| |||||  ||||||||
seq2  TCTGAACAAATTAAGTTCGAAATGTATTTTTTAT-GAAAAACGATGATCT  49

seq1  TTCATCTTAATGTTCTCTGAGAGATGAGTAAATATTCTAGTAACTAAGTA  99
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  TTCATCTTAATGTTCTCTGAGAGATGAGTTAATATTCTAGTAACT-AGTA  98

seq1  GTTCATTAAAAGCATCAAAGTTGATTACCTCCTGACATTCTAAAGGAGAT  149
      | ||| |||||||||||||||||| |||||||||||| ||||||||||||
seq2  G-TCA-TAAAAGCATCAAAGTTGAATACCTCCTGACA-TCTAAAGGAGAT  145

seq1  TCAGTATACATTAGCACAATATTATTGGGGGAATTAAAATTCTTTATTGA  199
      |||||||||||||||||||||||||| |||||||||||||   |||||||
seq2  TCAGTATACATTAGCACAATATTATT-GGGGAATTAAAAT--CTTATTGA  192

seq1  GAAAAAGTGTTGTATTCACTAGATACTATACAGGTTAATTTGATGTTCAA  249
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAAAAAGTGTTGTATTCACTAGATACTATACAGG-TAATTTGATGTTCAA  241

seq1  AAGAGTAATGACTGTTGAAAAGCGAAAATGTAAACACCGAATTAAAAACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAATGACTGTTGAAAAGCGAAAATGTAAACACCGAATTAAAAACA  291

seq1  ATTGTGAAGTAACTCTCTTCTTTTGTCTACATTGGTAAAAAGGCTGGTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAAGTAACTCTCTTCTTTTGTCTACATTGGTAAAAAGGCTGGTCA  341

seq1  GCAGTGTTGTCTCTACAATTTCTCCTCCTCCACCGATTTTAGATACTTGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTTGTCTCTACAATTTCTCCTCCTCCACCGATTTTAGATACTTGA  391

seq1  GTAAAGATATCACAATTATGAACTAATACTGTTGTGATGTAAACATTAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGATATCACAATTATGAACTAATACTGTTGTGATGTAAACATTAAT  441

seq1  TAATTTGAATACAAGACGCTATATTGATACTTTATTTCAAGGAACTATGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGAATACAAGACGCTATATTGATACTTTATTTCAAGGAACTATGA  491

seq1  GGAAATTGCAATACAACTGTGTCATACACACACAATCTTAGTAACAAAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTGCAATACAACTGTGTCATACACACACAATCTTAGTAACAAAGT  541

seq1  GTAGAACATCATAATGTTTTAATTTGATACTCCAACTGAAGAACATATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAACATCATAATGTTTTAATTTGATACTCCAACTGAAGAACATATTT  591

seq1  GTGATCTCATGACGTCTCTCAGCATAGCATTTTAAAAAGAATACATTATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTCATGACGTCTCTCAGCATAGCATTTTAAAAAGAATACATTATT  641

seq1  GTCCTTAATGTTTTTCTGCAGTATTCTAGTGTTGTTTATTTAAAATATGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTAATGTTTTTCTGCAGTATTCTAGTGTTGTTTATTTAAAATATGG  691

seq1  GTATACAATCCTCCATGGTCTCCAAAGTGCTCAGGTAGATTCCGTTCCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAATCCTCCATGGTCTCCAAAGTGCTCAGGTAGATTCCGTTCCTA  741

seq1  GTACTCACCATGAATATATATATATATATACAGAAAGTTATTTCCAGTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCACCATGAATATATATATATATATACAGAAAGTTATTTCCAGTCT  791

seq1  TATGCAAATTTCCATTAGCAAGAATTACTTTTTTATTAAATTTTTAAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAATTTCCATTAGCAAGAATTACTTTTTTATTAAATTTTTAAATA  841

seq1  TTGTTTTGAATGTTCAGATAGTATATATATGTATATATGTATATATGTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGAATGTTCAGATAGTATATATATGTATATATGTATATATGTGT  891

seq1  ATGTATATGTATATATGTGTATACATATGTGTATATATATATGCACACAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATGTATATATGTGTATACATATGTGTATATATATATGCACACAC  941

seq1  ACAAACACACACACACTCACATATATATATATATGTTTTTGAGAGAGTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACACACACACTCACATATATATATATATGTTTTTGAGAGAGTGT  991

seq1  CTCTGCCCAGGAGATAGTATATTTTTATCATATTCTTTCCTTTCCCACTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCCAGGAGATAGTATATTTTTATCATATTCTTTCCTTTCCCACTA  1041

seq1  ACTTTCTATATCCTTTCTCTACCTAAAATGACATCTTTGGTTAAATTCTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTATATCCTTTCTCTACCTAAAATGACATCTTTGGTTAAATTCTA  1091

seq1  ATTCCTTCCTTAAGCAAATGAATTC  1124
      |||||||||||||||||||||||||
seq2  ATTCCTTCCTTAAGCAAATGAATTC  1116