BAC Information

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BAC

Clone NameB6Ng01-156J08
Chromosome3 (Build37)
Map Location 138,825,493 - 138,826,613
singlet/doubletsinglet
Overlap geneEG229879
Upstream gene4930579F01Rik, Adh7, Adh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771, Rap1gds1
Downstream geneB930007M17Rik, LOC100039840, LOC229883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156J08.bB6Ng01-156J08.g
ACCDH951050DH951051
length1,1151,243
definitionDH951050|Mus musculus domesticus DNA, BAC clone: B6Ng01-156J08, 5' end.DH951051|Mus musculus domesticus DNA, BAC clone: B6Ng01-156J08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtctaccaagtagtaagccatccatcttggtataatcaaaca
aaccctttcttttgttaattgtatatacagtctttgctctatattatata
acaaaatttcaagaacaaaggattcatttgtcccaaatctatgtccacat
agattttttttctttcttgaagaaaagaaaaaagcaaatttgacatgtca
tccccacccaccccacagcctctagcttttactcttctgaaatccaggtg
ccaagattcagttcaagctcaagctcacaggatctggcatcttcctgtac
aggaagtcctttgaggcctgtgccatagaaaccggaactggaccataagg
ataggaggttgcttgactttgtgttccaatttacccagctatgcctgcac
tgtgcctgcgaggaacttaaatatctagtggtggtattctgtgagatgca
aatttaagatcgaaacgtgggaaaatgccaaggagagagacaaaagttta
cagaatgctggcagaagtgaaggttgatttatccttttatgtagcagtgt
ctgaacaccgtgattttaagtacagttctgggttcgttcttgagggctgg
gccagaagcctccaaaggaaggcaggttagatcagagagtaaactgtagg
gccctggtggtgcttcaagatcacctagttctcttccctatcatccctaa
aaaccagttgcagtctctcttggccaaccttcaacttcagtcctcacctt
agctctcttctcagttttattttatttcatttattcttataacaataata
ttattactattattggtttttcaagacagggtttcactgtgtagccttgg
ctgtcctggaacttgctctgtacaccaggctggactagaactcacagaga
tctgcctccctgagtacagagattaaagcatgcaccaccactgactgcca
ggcttctccttagtttcaatgcttttgcatttggcctgctgcagaccagc
cttcccatgtacctatttttgatttgatatgaatagtacaaatggatttg
aatactatatgacatgctatttgttcccatgaacagtttaaatatagttg
tttctatgggtgaaa
gaattcagcatagaagtctatacagctttcaaatgagagctaacacaaat
actcttcaaattactgtgttaagtagtaactgacaaaacatatacaaaat
ctttgtatgaaaccactacactattgtactaatatcaaacctgaaggctc
caaccaaaaagaaaattataaagcagtatctgttgtgagcatacatgcaa
tacttctcaaataataatacactgaattcaagatcacattaaaatattaa
acaccatgataaatttgacatcatcacagaaatgcaaggatggttcaata
tacatatatcaattagacacaatccaacacataacaaaccaaagtacaga
aattacattgtttcaaggtcacagaaaatatattaaacaacatccagtat
catttcatgatcaaacttctagaaagattagaaatacaaggcatacacct
caacataataaggtacatttacaacaagcccacaataaacacattggaaa
aagaaattcaaaagtacttccctaaaatcaggaacaagactagaatgtcc
acattctccatccctatacaacatactacttaatatcttagctagagtaa
aaaggaaactgaaagaaataaatggaataaacataggaaagggagatgac
aaagcatacttattgcagacaatatgattttacataccaaagactccaca
aagaaacttctatagctgaaaaacactttcaacaaagcagcaggatacaa
aattaatgcttaaaactcagtagcctctctatacaaataacttacatact
gggaaatgaaacataaaaacaacatctttcacctgtccataattgcctca
aaggaaaaaatatatcttgaaacaactcttaacaagcaattaaaagactt
gtaaaaatttttttaaaaattgacattgaggaagatattgaagaagacac
agaaatgacagacttcccatgctcatggatttatagattatgatgtgaaa
tggacatcttacccaaagcaatctataaattcatgtatgttttatgaaaa
ttataaaatattcttttacaaaaatgaattcttacttcatattggaaacc
aaaattcccggaataacttaaacattatgaacctaggaactgctgggagg
ccatatcccccggaattctatggatacagaacctatgtattaaaccaact
ggatagagtctgtaaaaaaataataggcgtgtgtgtgattacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_138825493_138826613
seq2: B6Ng01-156J08.b_41_1155

seq1  GAATTCCTGTCTACCAAGTAGTAAGCCATCCATCTTGGTATAATCAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCTACCAAGTAGTAAGCCATCCATCTTGGTATAATCAAACA  50

seq1  AACCCTTTCTTTTGTTAATTGTATATACAGTCTTTGCTCTATATTATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTTCTTTTGTTAATTGTATATACAGTCTTTGCTCTATATTATATA  100

seq1  ACAAAATTTCAAGAACAAAGGATTCATTTGTCCCAAATCTATGTCCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTTCAAGAACAAAGGATTCATTTGTCCCAAATCTATGTCCACAT  150

seq1  AGATTTTTTTTCTTTCTTGAAGAAAAGAAAAAAGCAAATTTGACATGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTTTCTTTCTTGAAGAAAAGAAAAAAGCAAATTTGACATGTCA  200

seq1  TCCCCACCCACCCCACAGCCTCTAGCTTTTACTCTTCTGAAATCCAGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACCCACCCCACAGCCTCTAGCTTTTACTCTTCTGAAATCCAGGTG  250

seq1  CCAAGATTCAGTTCAAGCTCAAGCTCACAGGATCTGGCATCTTCCTGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATTCAGTTCAAGCTCAAGCTCACAGGATCTGGCATCTTCCTGTAC  300

seq1  AGGAAGTCCTTTGAGGCCTGTGCCATAGAAACCGGAACTGGACCATAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTCCTTTGAGGCCTGTGCCATAGAAACCGGAACTGGACCATAAGG  350

seq1  ATAGGAGGTTGCTTGACTTTGTGTTCCAATTTACCCAGCTATGCCTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGGTTGCTTGACTTTGTGTTCCAATTTACCCAGCTATGCCTGCAC  400

seq1  TGTGCCTGCGAGGAACTTAAATATCTAGTGGTGGTATTCTGTGAGATGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGCGAGGAACTTAAATATCTAGTGGTGGTATTCTGTGAGATGCA  450

seq1  AATTTAAGATCGAAACGTGGGAAAATGCCAAGGAGAGAGACAAAAGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAGATCGAAACGTGGGAAAATGCCAAGGAGAGAGACAAAAGTTTA  500

seq1  CAGAATGCTGGCAGAAGTGAAGGTTGATTTATCCTTTTATGTAGCAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGCTGGCAGAAGTGAAGGTTGATTTATCCTTTTATGTAGCAGTGT  550

seq1  CTGAACACCGTGATTTTAAGTACAGTTCTGGGTTCGTTCTTGAGGGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACACCGTGATTTTAAGTACAGTTCTGGGTTCGTTCTTGAGGGCTGG  600

seq1  GCCAGAAGCCTCCAAAGGAAGGCAGGTTAGATCAGAGAGTAAACTGTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAAGCCTCCAAAGGAAGGCAGGTTAGATCAGAGAGTAAACTGTAGG  650

seq1  GCCCTGGTGGTGCTTCAAGATCACCTAGTTCTCTTCCCTATCATCCCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGTGGTGCTTCAAGATCACCTAGTTCTCTTCCCTATCATCCCTAA  700

seq1  AAACCAGTTGCAGTCTCTCTTGGCCAACCTTCAACTTCAGTCCTCACCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGTTGCAGTCTCTCTTGGCCAACCTTCAACTTCAGTCCTCACCTT  750

seq1  AGCTCTCTTCTCAGTTTTATTTTATTTCATTTATTCTTATAACAATAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCTTCTCAGTTTTATTTTATTTCATTTATTCTTATAACAATAATA  800

seq1  TTATTACTATTATTGGTTTTTCAAGACAGGGTTTCACTGTGTAGCCTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTATTATTGGTTTTTCAAGACAGGGTTTCACTGTGTAGCCTTGG  850

seq1  CTGTCCTGGAACTTGCTCTGTACACCAGGCTGGACTAGAACTCACAGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGAACTTGCTCTGTACACCAGGCTGGACTAGAACTCACAGAGA  900

seq1  TCTGCCTCCCTGAGTACAGAGATTAAAAGCATGCACCACCACTGACTGCC  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTGCCTCCCTGAGTACAGAGATT-AAAGCATGCACCACCACTGACTGCC  949

seq1  AGGCTTCTCCTTAGTTTCAATGCTTTTGCATTTGGCCTGGCTGCAGAACC  1000
      |||||||||||||||||||||||||||||||||||||| ||||||| |||
seq2  AGGCTTCTCCTTAGTTTCAATGCTTTTGCATTTGGCCT-GCTGCAG-ACC  997

seq1  AGCCTTCCCAATGTACCTATTTTTTGATTTGATATGAATAGTACAAATGG  1050
      ||||||||| ||||||||| ||||||||||||||||||||||||||||||
seq2  AGCCTTCCC-ATGTACCTA-TTTTTGATTTGATATGAATAGTACAAATGG  1045

seq1  AATTTGAATTACTATATGACATGCTATATG-TCCCATG-ACAGTTTAAAT  1098
       ||||||| |||||||||||||||||| || ||||||| |||||||||| 
seq2  -ATTTGAA-TACTATATGACATGCTATTTGTTCCCATGAACAGTTTAAA-  1092

seq1  TATAGTTTGTTTCTAT-GGTGAAA  1121
      ||||| |||||||||| |||||||
seq2  TATAG-TTGTTTCTATGGGTGAAA  1115