BAC Information

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BAC

Clone NameB6Ng01-157B14
Chromosome3 (Build37)
Map Location 137,570,358 - 137,571,431
singlet/doubletsinglet
Overlap geneDnajb14
Upstream genePpp3ca, LOC668870, LOC100039447, Emcn, EG229862, Ddit4l, LOC668874, H2afz
Downstream geneMap2k1ip1, Dapp1, EG329763, LOC100039528, Mttp, Rg9mtd2, 4930579F01Rik, Adh7, Adh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157B14.bB6Ng01-157B14.g
ACCDH951426DH951427
length1,2521,079
definitionDH951426|Mus musculus domesticus DNA, BAC clone: B6Ng01-157B14, 5' end.DH951427|Mus musculus domesticus DNA, BAC clone: B6Ng01-157B14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctgtcctgttctcaaaaatggccccgtcctttcattctatga
tgaaaaggtcaaatctcatctaatgtcactgttagcagctttatgaggga
ggtcacagcctggtcctcaagccacactaaggagccagaaatagccaagt
gcctcaggaaagggagagagagagagagggagagagaaagagagagagag
agagagctctacagcagggactccattcatacctactgctgctgagcatg
tccaacaaggataacatcaattgctgttaaccctaaggtggtccatactc
tgtttctcttcctttcccttccttaatgcagagttcacagtctacctcca
gctagccaccttatagcctctggaattaaacactgtcttctgctgggtac
ctatgttttgcctttgtttgcaaatataggggctgtgaagaaccatctta
cccccatcttgcagaagtccattcaggaggagcaaggacaactggcttta
gaatgcatgggctgcagtccatgggttatcacagccacatgggtgggcct
tggtgtggcccagccccgaggactatgtgtcctgaggacttcatgcttta
aggagttctgctctgcctgctgccctcacatccctcgtaatctaagaatt
atatgaaacctttaaagaggcttccagtcccttgctgggcagtacctctg
gcactcatagtactaatgcttgatctctcaggaattgctgctggagcagg
ttatggttctatcacggcctggagaagaacttagagatggagattgttag
caatgactgccactcttagaaaacatttggggaaaatgaagttgttagtg
aagctaggttgagatgtttttactactggctctgatgatcttagggaaca
atatgaagttcagaaaggcacactcattagttaagctagggaccctttat
ggtcagggaacagatcaatggcagcactggctgacctgactctcactgga
ggctggctggtgatgaatgatttccttgacccattttaccctcagcttcc
tgaattaattggtcaagaattgccgatggtagatataatttggagattaa
ttagaagacgattgatctttataaaggtaaatttgtgatcttaggtcctg
agatgtttaaggaaaataaaaatacctcttcctgtactgcaatttcgcct
ggccggatgagatacgtgcgtggaataatggagcgtgctcggtacgtaca
tg
gaattcactgtccctggtagttctttgtcagcctgaatagctccttttgg
caccatggaagctatctgggaaaagcaggcttccagctcagttaatctga
ttttcctgtgaccaagcatgtaatatgtttagccataaggtcttatcacc
tacttctagcaggcagaattatggttatttcttcaagttgtgcgtggggg
gtaggtatttgcatttttgtgtgtggggtatacatatattccaaattttt
gccatgtgtgaaagcacacacaatcctggcacttggggtgctggtgcaca
aggaccacaagtgtgagggcagcttgggctatttaatgaagcccattctc
gagaagaaggtggaggaagaaagggaggaggaacgagttttgagttctta
actgttgcaattatcacaaaatcacaacaaatacagccactggcagcctt
gcttctcgggtgacagcttagaaaagtcccagagaatattccagagcagc
cccttaagccccttggctcaggaagggctctgggaggggtggcagggctc
tagccttatttccttttgatgttgattctgtgtgctaagttcaaaataaa
gttatataaagaaaaagaccaaaaggtgtggtggcacatgcctttagtca
tagcattcagaggcaaaggcaggaggatctctgagttcaaggccagcctg
gtctacatagtaagtttcaggacagccaggactatgtagaaaccctgtcc
caaagagaaattctttttaaataaaagaaaaaccctgagtgaaatagttt
ataggaatcgtacttccttttctttcatttttaaaagtcggtttagagaa
ttaatatgtgtgtatatatatatgaacctctctaaagttttattttaaat
ttaagcaactaaggtgatgtaaataatttttaactagcaatattttgaca
ttacagaaacagaatttgcagtatgcagccaagtgtacgttgatgagcac
tgcggaagaaaggcgatgccctgagcatggaagaaactgcaaggagctag
acggctgaccagtctcttacaggggggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_137570358_137571431
seq2: B6Ng01-157B14.g_65_1143

seq1  GAATTCACTGTCCCTGGTAGTTCTTTGTCAGCCTGAATAGCTCCTTTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTCCCTGGTAGTTCTTTGTCAGCCTGAATAGCTCCTTTTGG  50

seq1  CACCATGGAAGCTATCTGGGAAAAGCAGGCTTCCAGCTCAGTTAATCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGGAAGCTATCTGGGAAAAGCAGGCTTCCAGCTCAGTTAATCTGA  100

seq1  TTTTCCTGTGACCAAGCATGTAATATGTTTAGCCATAAGGTCTTATCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGTGACCAAGCATGTAATATGTTTAGCCATAAGGTCTTATCACC  150

seq1  TACTTCTAGCAGGCAGAATTATGGTTATTTCTTCAAGTTGTGCGTGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTAGCAGGCAGAATTATGGTTATTTCTTCAAGTTGTGCGTGGGGG  200

seq1  GTAGGTATTTGCATTTTTGTGTGTGGGGTATACATATATTCCAAATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTATTTGCATTTTTGTGTGTGGGGTATACATATATTCCAAATTTTT  250

seq1  GCCATGTGTGAAAGCACACACAATCCTGGCACTTGGGGTGCTGGTGCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTGTGAAAGCACACACAATCCTGGCACTTGGGGTGCTGGTGCACA  300

seq1  AGGACCACAAGTGTGAGGGCAGCTTGGGCTATTTAATGAAGCCCATTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCACAAGTGTGAGGGCAGCTTGGGCTATTTAATGAAGCCCATTCTC  350

seq1  GAGAAGAAGGTGGAGGAAGAAAGGGAGGAGGAACGAGTTTTGAGTTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAGGTGGAGGAAGAAAGGGAGGAGGAACGAGTTTTGAGTTCTTA  400

seq1  ACTGTTGCAATTATCACAAAATCACAACAAATACAGCCACTGGCAGCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGCAATTATCACAAAATCACAACAAATACAGCCACTGGCAGCCTT  450

seq1  GCTTCTCGGGTGACAGCTTAGAAAAGTCCCAGAGAATATTCCAGAGCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCGGGTGACAGCTTAGAAAAGTCCCAGAGAATATTCCAGAGCAGC  500

seq1  CCCTTAAGCCCCTTGGCTCAGGAAGGGCTCTGGGAGGGGTGGCAGGGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAAGCCCCTTGGCTCAGGAAGGGCTCTGGGAGGGGTGGCAGGGCTC  550

seq1  TAGCCTTATTTCCTTTTGATGTTGATTCTGTGTGCTAAGTTCAAAATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTATTTCCTTTTGATGTTGATTCTGTGTGCTAAGTTCAAAATAAA  600

seq1  GTTATATAAAGAAAAAGACCAAAAGGTGTGGTGGCACATGCCTTTAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATAAAGAAAAAGACCAAAAGGTGTGGTGGCACATGCCTTTAGTCA  650

seq1  TAGCATTCAGAGGCAAAGGCAGGAGGATCTCTGAGTTCAAGGCCAGCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTCAGAGGCAAAGGCAGGAGGATCTCTGAGTTCAAGGCCAGCCTG  700

seq1  GTCTACATAGTAAGTTTCAGGACAGCCAGGACTATGTAGAAACCCTGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACATAGTAAGTTTCAGGACAGCCAGGACTATGTAGAAACCCTGTCC  750

seq1  CAAAGAGAAATTC-TTTTAAATAAAAGAAAAACCCTGAGTGAAATAGTTT  799
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGAAATTCTTTTTAAATAAAAGAAAAACCCTGAGTGAAATAGTTT  800

seq1  ATAGGAATCGTACTTCC-TTTCTTTCATTTTTAAAAGTCGGTTAAGAGAA  848
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  ATAGGAATCGTACTTCCTTTTCTTTCATTTTTAAAAGTCGGTTTAGAGAA  850

seq1  TT-ATATGTGTGTATATATATATGAACCTCTCTAAAGTGTTA-TTTAAAT  896
      || ||||||||||||||||||||||||||||||||||| ||| |||||||
seq2  TTAATATGTGTGTATATATATATGAACCTCTCTAAAGTTTTATTTTAAAT  900

seq1  TTAAGCAACTAAGGTGATGTAAATAATTTTTAACTAGCAAATATTTGACA  946
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  TTAAGCAACTAAGGTGATGTAAATAATTTTTAACTAGCAATATTTTGACA  950

seq1  -TACAGAAACAG-ATATGCAGTATGCAGCCAAAGTGTACCGTGATGAGCA  994
       ||||||||||| || |||||||||||||| ||||||||  |||||||||
seq2  TTACAGAAACAGAATTTGCAGTATGCAGCC-AAGTGTACGTTGATGAGCA  999

seq1  GCTGCGGAGGAAGGCGGATGCCCTGAGCATGGA--GAACTGCAAGGAGCT  1042
       ||||||| ||| |  |||||||||||||||||   ||||||||||||||
seq2  -CTGCGGAAGAAAGGCGATGCCCTGAGCATGGAAGAAACTGCAAGGAGCT  1048

seq1  AGAGCGGCTGACCAGTCTCTACAAGGGGGGAT  1074
      ||| ||||||||||||||||   |||||||||
seq2  AGA-CGGCTGACCAGTCTCTTACAGGGGGGAT  1079