BAC Information

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BAC

Clone NameB6Ng01-157D22
Chromosome3 (Build37)
Map Location 76,328,569 - 76,460,787
singlet/doubletdoublet
Overlap geneFstl5
Upstream genePdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157D22.bB6Ng01-157D22.g
ACCDH951533DH951534
length1,147548
definitionDH951533|Mus musculus domesticus DNA, BAC clone: B6Ng01-157D22, 5' end.DH951534|Mus musculus domesticus DNA, BAC clone: B6Ng01-157D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,459,626 - 76,460,787)(76,328,569 - 76,329,122)
sequence
gaattcttgtgactattaggatagataatgtatatctaagtctggtgaat
attaagcaatactgaaatactattactgtcactgctgtaagtactgggct
gcagtggagctcactgctagcctgcttacttagcatgattttcagcgagc
ctctggttctacacagtcgtatatatacaggtagatattagtaaaacttg
aattgctttcatgattattctaccaacaaaacagtattttaatcatgaaa
cattgatattggagaaaataaaggaacactatctctgtctttaaagaatt
tacagaatagaagtattcacatggatttagaaaatcttgatttgataaac
gacagctctgtggaagaagtgcaaaacaggatgagaggctaaagagaaat
atgatacattcattgagccttaaaatgtgaactttttatattcaggagga
ccagaaccttttaaaagatgacttatagagcaggtaacatgtctcagtgg
gcataaacttgacctgaaatggatcaacagaatttttctaatagacaatg
gaatcctccatgctgtcttatgtcatttgcatatgcatatgtgtcaagtg
cacacctactcaaacaagcacacataatacattaagtatatataaaaatt
aaactaaatttaactcaggagacatatgagacgttcttttatgatgaatt
tccttcaaataaactcaaatacatctgagagagaaattgttgttaatcta
attttcaaaagatcaaaagaattttaaaatacctttttcaagtgtcaaca
acagtttaattgtgctgcgttttagcatttcaaaagtttactactaagtt
taaccgtttttgcaatttcattttaaaatttaccaagacaagcaaaccat
tataaaataaagaggtatgggtaacagtgaaccaatgtgatctgctttat
tggagaaaattgatatttggacagtctgctctaggatttaactgtaaact
gacccatttaatatattttaagcgactccagtcacaaatgttgggccggg
aatgccacatgttttgatgatcacttgtgggaggctccattgcagcttaa
ctgtcagtcggcttgggaaattactctctgctctcatctcaatttcc
agaatgaggacatgaattggttcctgaaatcagagtgtctgttctcagaa
cgtagctgtcaagaaaggctgagcaaaaaaaaaaaacacagttcagggga
actacttagattagaaaagtcccaagaatattatagtttgaaagattagt
gatgtgatactagacagaagataaagatgtcaatgtaacatagcaatagg
caaacttaagttaggctaaaatttattgagaatctgtggaggagaaagta
cattaaggaatgtagaccaaattggctcatctgggaccaagtttaggtac
ttacatcaagttacacagcatcatatttcaacatttttatttgtacaagg
aggcctcttaaatgtgttatttcaaggatgaatttttatatttttaaata
aaatatatcatactacttgaaataccaatttagaggatgcttattatatt
caaagtagaaatggaatattattggtcttgcaaactttatatgcctcagt
acaggggaatgccagggccaagaagtgggagtgggtggatgggggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76459626_76460787
seq2: B6Ng01-157D22.b_47_1193 (reverse)

seq1  GGAAATGGGTGATGAGAGCCAGAGAGTAATTTTCACAGCCCGACTGACAG  50
      ||||||  | |||||||| |||||||||| |||| ||  |||||||||||
seq2  GGAAAT-TGAGATGAGAG-CAGAGAGTAA-TTTCCCAAGCCGACTGACAG  47

seq1  TTAGGCTGCATATTGGAGCCTCCCAACAAAGTGATCATCTATAAACATGT  100
      ||| |||||  | ||||||||||||   |||||||||||   ||||||||
seq2  TTAAGCTGC--AATGGAGCCTCCCA--CAAGTGATCATC--AAAACATGT  91

seq1  -GCA-TCCCGGCCCAACATTTTGTGACTGGAGTCGCTTGAAATATATTAA  148
       ||| ||||||||||||| ||||||||||||||||||| |||||||||||
seq2  GGCATTCCCGGCCCAACA-TTTGTGACTGGAGTCGCTTAAAATATATTAA  140

seq1  ATGTGTCAGTTTACAGTTAAAATCCTAGAAGCAGACTTGTCCAAATAATC  198
      ||| |||||||||||||| ||||||||| ||||||| ||||||||| |||
seq2  ATGGGTCAGTTTACAGTT-AAATCCTAG-AGCAGAC-TGTCCAAAT-ATC  186

seq1  AATTTTTCTCCAATAAAGCAGATCACATTTGGTTCACTGTTACCCATACC  248
      || |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AA-TTTTCTCCAATAAAGCAGATCACA-TTGGTTCACTGTTACCCATACC  234

seq1  TCTTTTATTTTATTATTGTTTGCTTGTCTTTGGTAAATTTTTAAAATGAA  298
      || |||||||||| || ||||||||||| |||||||| ||||||||||||
seq2  TC-TTTATTTTATAATGGTTTGCTTGTC-TTGGTAAA-TTTTAAAATGAA  281

seq1  ATTGCAAAAACGGTTAAACTTAGTAGTAAACTTTTGAAATGCTAAAACGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAAAACGGTTAAACTTAGTAGTAAACTTTTGAAATGCTAAAACGC  331

seq1  AGCACAATTAAACTGTTGTTGACACTTG-AAAAGGTATTTTAAAATTCTT  397
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGCACAATTAAACTGTTGTTGACACTTGAAAAAGGTATTTTAAAATTCTT  381

seq1  TTGATCTTTTG-AAATTAGATTAACAACAATTTCTCTCTCAGATGTATTT  446
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTTTTGAAAATTAGATTAACAACAATTTCTCTCTCAGATGTATTT  431

seq1  GAGTTTATTTGAAGGAAATTCATCATAAAAGAACGTCTCATATGTCTCCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATTTGAAGGAAATTCATCATAAAAGAACGTCTCATATGTCTCCT  481

seq1  GAGTTAAATTTAGTTTAATTTTTATATATACTTAATGTATTATGTGTGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAATTTAGTTTAATTTTTATATATACTTAATGTATTATGTGTGCT  531

seq1  TGTTTGAGTAGGTGTGCACTTGACACATATGCATATGCAAATGACATAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAGTAGGTGTGCACTTGACACATATGCATATGCAAATGACATAAG  581

seq1  ACAGCATGGAGGATTCCATTGTCTATTAGAAAAATTCTGTTGATCCATTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATGGAGGATTCCATTGTCTATTAGAAAAATTCTGTTGATCCATTT  631

seq1  CAGGTCAAGTTTATGCCCACTGAGACATGTTACCTGCTCTATAAGTCATC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAAGTTTATGCCCACTGAGACATGTTACCTGCTCTATAAGTCATC  681

seq1  TTTTAAAAGGTTCTGGTCCTCCTGAATATAAAAAGTTCACATTTTAAGGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAGGTTCTGGTCCTCCTGAATATAAAAAGTTCACATTTTAAGGC  731

seq1  TCAATGAATGTATCATATTTCTCTTTAGCCTCTCATCCTGTTTTGCACTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAATGTATCATATTTCTCTTTAGCCTCTCATCCTGTTTTGCACTT  781

seq1  CTTCCACAGAGCTGTCGTTTATCAAATCAAGATTTTCTAAATCCATGTGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACAGAGCTGTCGTTTATCAAATCAAGATTTTCTAAATCCATGTGA  831

seq1  ATACTTCTATTCTGTAAATTCTTTAAAGACAGAGATAGTGTTCCTTTATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCTATTCTGTAAATTCTTTAAAGACAGAGATAGTGTTCCTTTATT  881

seq1  TTCTCCAATATCAATGTTTCATGATTAAAATACTGTTTTGTTGGTAGAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAATATCAATGTTTCATGATTAAAATACTGTTTTGTTGGTAGAAT  931

seq1  AATCATGAAAGCAATTCAAGTTTTACTAATATCTACCTGTATATATACGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGAAAGCAATTCAAGTTTTACTAATATCTACCTGTATATATACGA  981

seq1  CTGTGTAGAACCAGAGGCTCGCTGAAAATCATGCTAAGTAAGCAGGCTAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGAACCAGAGGCTCGCTGAAAATCATGCTAAGTAAGCAGGCTAG  1031

seq1  CAGTGAGCTCCACTGCAGCCCAGTACTTACAGCAGTGACAGTAATAGTAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGCTCCACTGCAGCCCAGTACTTACAGCAGTGACAGTAATAGTAT  1081

seq1  TTCAGTATTGCTTAATATTCACCAGACTTAGATATACATTATCTATCCTA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTATTGCTTAATATTCACCAGACTTAGATATACATTATCTATCCTA  1131

seq1  ATAGTCACAAGAATTC  1162
      ||||||||||||||||
seq2  ATAGTCACAAGAATTC  1147

seq1: chr3_76328569_76329122
seq2: B6Ng01-157D22.g_65_618

seq1  GAATTCAGAATGAGGACATGAATTGGTTCCTGAAATCAGAGTGTCTGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATGAGGACATGAATTGGTTCCTGAAATCAGAGTGTCTGTTC  50

seq1  TCAGAACGTAGCTGTCAAGAAAGGCTGAGCAAAAAAAAAAAACACAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACGTAGCTGTCAAGAAAGGCTGAGCAAAAAAAAAAAACACAGTTC  100

seq1  AGGGGAACTACTTAGATTAGAAAAGTCCCAAGAATATTATAGTTTGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAACTACTTAGATTAGAAAAGTCCCAAGAATATTATAGTTTGAAAG  150

seq1  ATTAGTGATGTGATACTAGACAGAAGATAAAGATGTCAATGTAACATAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGATGTGATACTAGACAGAAGATAAAGATGTCAATGTAACATAGC  200

seq1  AATAGGCAAACTTAAGTTAGGCTAAAATTTATTGAGAATCTGTGGAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGCAAACTTAAGTTAGGCTAAAATTTATTGAGAATCTGTGGAGGAG  250

seq1  AAAGTACATTAAGGAATGTAGACCAAATTGGCTCATCTGGGACCAAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACATTAAGGAATGTAGACCAAATTGGCTCATCTGGGACCAAGTTT  300

seq1  AGGTACTTACATCAAGTTACACAGCATCATATTTCAACATTTTTATTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTTACATCAAGTTACACAGCATCATATTTCAACATTTTTATTTGT  350

seq1  ACAAGGAGGCCTCTTAAATGTGTTATTTCAAGGATGAATTTTTATATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGGCCTCTTAAATGTGTTATTTCAAGGATGAATTTTTATATTTT  400

seq1  TAAATAAAATATATCATACTACTTGAAATACCAATTTAGAGGATGCTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAATATATCATACTACTTGAAATACCAATTTAGAGGATGCTTAT  450

seq1  TATATTCAAAGTAGAAATGGAATATTATTGGTCTTGCAAACTTTATATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCAAAGTAGAAATGGAATATTATTGGTCTTGCAAACTTTATATGC  500

seq1  CTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGATGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGATGGGG  550

seq1  GAGT  554
      ||||
seq2  GAGT  554