BAC Information

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BAC

Clone NameB6Ng01-158C20
Chromosome3 (Build37)
Map Location 76,488,665 - 76,601,888
singlet/doubletdoublet
Overlap geneFstl5
Upstream geneGolph4
Downstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158C20.bB6Ng01-158C20.g
ACCDH952201DH952202
length1,1651,028
definitionDH952201|Mus musculus domesticus DNA, BAC clone: B6Ng01-158C20, 5' end.DH952202|Mus musculus domesticus DNA, BAC clone: B6Ng01-158C20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,600,704 - 76,601,888)(76,488,665 - 76,489,700)
sequence
gaattctggaaatgagtaaaacttaattactatgagtaatgtagttaatg
cttgatttttattcaaataaattataaaagtttcttaaagaaaaatatag
attctctggagcactttcttgttgaaagttgtaatttgtccaatgaaata
ttgcctcataccaactttctcctcaggctgaatctctatatataggaatc
aattttatacataaaacatctttataaatgtaagcatttgcccccaatat
atttgggctagaaaaatagaattacttccctgagaaaattttttaaaaaa
ttatcaagagtttgcttaaaacatggatataaccctatttttccccatcc
tacatgcacagagagatcacaatgacgccagcctggttcaatgatacact
acaactaagccagaatcacagtgagatttcttgaatgccattggtcagct
taactcatgaaacctcagcagagatttatttatgtttttatagcattttt
gaatgaccgaattgcatttatcagtgtagatattaaaaactcatattctc
aacatggaaaagaaatgaagattaagagcagaaaaattcaggcacttaaa
atgggtgccctaaatgcagtggtcagataatacataataagaaaatttat
atttctaggtttatgtctgaaggaaaaagtctttatttatgaaatggcaa
aatattcagtgatgatgttattctagtaaacctgccttggtgacaatgga
tagaacatgattttgcattaactaccattaacatcttttattgagttact
cagattttagatgaggcatgaaaatgctttgttttatatgaaaactcaag
aataaaatgaatatgcaaaaaagaaaactaatgagttagaaaagctacca
gacacttctgggaaccaatgagatgttacagaactggaaacaaacaaaca
aacaaacaacttgatgataatagctcaagcactcccaagtcaatgtctca
tatgagataaacccaaccttaatgtgtgctttgatgtatatctgattata
cattcagctcggggttgtcataatcagaaacacctttacgatagctatgg
gcactattgataaaattgacttacacccataaaatatttagtagaatagc
ctttggctatattca
gaattctctttgctcttagaacatcttgcttgtcttgtttctgacccata
ctttgtaagatgtggttttatttcctgagaaagactttcatattctccaa
gattatctggtagttttctgtcaacttgaccaaaacgaaagtcatttcag
aggaggagacctcagttgggaaaaatggctccataagatctggctgtggg
ccattctgtagggcatttttatattggtgattgataaccaagagtacagc
tcattgtggttggtgctatcactaggctgatagtcctggaatctagaaaa
tgataactggcctgcctttatgaacacaccagtgaatatccttcctccat
ggctcttgcatcagctcctgccatgtttgagttcttgtccttacttcctt
tgaagatgaacaatgatgcagaaaaggaggctgaagtaaactctttctcc
actaagttgctttgatcatagtgtttcaccacagcagtactaactcaaat
taagacaaagagtaaacataatccattccctatggtagtttgtacctaat
aaaatattgtgcacacacattaaaggaaggcatgaattcatggagatctt
aacatattatatacaattaatttgcataagttagtacatgcaagacacct
ttatttgtaacttgaatgatttaatgtggtcttcagaaaccctctatgag
agatcactcaggtgatatgttttttttttttttttttttgatttttccag
acatggtttctctgtgtagctctggctatcctgaaactcactctgtagac
caggctggcctcaaactcagaaattcacctgcctctgcctcccaagtgct
gggattaaaggcgtgtgtcaccacaacccagcagtgttataattttaaag
aagagaaatacagaccctgcaaaattcaaatttagcatgtggtgagatct
gaaagcagacatcccaccctgggcccatattttagtcttatctgcaaatt
cctcagtagtcatgaagattgtagcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76600704_76601888
seq2: B6Ng01-158C20.b_48_1212 (reverse)

seq1  TGAATTATAGCTCAAAAGCTATTTCTACTTAAAATATTTTATGGGTGTAA  50
      |||| |||||| |||| |||| |||||||  |||||||||||||||||||
seq2  TGAA-TATAGC-CAAAGGCTA-TTCTACT--AAATATTTTATGGGTGTAA  45

seq1  GTCATATTTTATC-ATAGTTGCCATAGCTATCGTAAAAGGTGTTTCTGAT  99
      |||| |||||||| |||||  ||||||||||||| |||||||||||||||
seq2  GTCA-ATTTTATCAATAGTGCCCATAGCTATCGT-AAAGGTGTTTCTGAT  93

seq1  TATGACATACCCGAGCTGAATGTATAATCAGAATTATACATCAAAAGCAC  149
      |||||||  |||||||||||||||||||||||  |||||||| |||||||
seq2  TATGACAACCCCGAGCTGAATGTATAATCAGA--TATACATC-AAAGCAC  140

seq1  ACATTAAGGTTGGGTTTATCTCATATTGGAGACATTTGACTTGGGAGTGC  199
      ||||||||||||||||||||||||||  |||||| |||||||||||||||
seq2  ACATTAAGGTTGGGTTTATCTCATAT--GAGACA-TTGACTTGGGAGTGC  187

seq1  TTTGAGCTATTTATCATCAAGTTTGTTTTGTTTTGTTTTGTTTTGTTTTC  249
       |||||||| |||||||||||||   |||||||   |||||||   ||||
seq2  -TTGAGCTA-TTATCATCAAGTT--GTTTGTTT--GTTTGTTT--GTTTC  229

seq1  CAGTTCTGTAACATCTCATTGGTTCCCAGAAGTGTCTGGTAGCTTTTCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGTAACATCTCATTGGTTCCCAGAAGTGTCTGGTAGCTTTTCTA  279

seq1  ACTCATTAGTTTTCTTTTTTGCATATTCATTTTATTCTTGAGTTTTCATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTAGTTTTCTTTTTTGCATATTCATTTTATTCTTGAGTTTTCATA  329

seq1  TAAAACAAAGCATTTTCATGCCTCATCTAAAATCTGAGTAACTCAATAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAAGCATTTTCATGCCTCATCTAAAATCTGAGTAACTCAATAAA  379

seq1  AGATGTTAATGGTAGTTAATGCAAAATCATGTTCTATCCATTGTCACCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTAATGGTAGTTAATGCAAAATCATGTTCTATCCATTGTCACCAA  429

seq1  GGCAGGTTTACTAGAATAACATCATCACTGAATATTTTGCCATTTCATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTTTACTAGAATAACATCATCACTGAATATTTTGCCATTTCATAA  479

seq1  ATAAAGACTTTTTCCTTCAGACATAAACCTAGAAATATAAATTTTCTTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGACTTTTTCCTTCAGACATAAACCTAGAAATATAAATTTTCTTAT  529

seq1  TATGTATTATCTGACCACTGCATTTAGGGCACCCATTTTAAGTGCCTGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTATCTGACCACTGCATTTAGGGCACCCATTTTAAGTGCCTGAA  579

seq1  TTTTTCTGCTCTTAATCTTCATTTCTTTTCCATGTTGAGAATATGAGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGCTCTTAATCTTCATTTCTTTTCCATGTTGAGAATATGAGTTT  629

seq1  TTAATATCTACACTGATAAATGCAATTCGGTCATTCAAAAATGCTATAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATCTACACTGATAAATGCAATTCGGTCATTCAAAAATGCTATAAA  679

seq1  AACATAAATAAATCTCTGCTGAGGTTTCATGAGTTAAGCTGACCAATGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAATAAATCTCTGCTGAGGTTTCATGAGTTAAGCTGACCAATGGC  729

seq1  ATTCAAGAAATCTCACTGTGATTCTGGCTTAGTTGTAGTGTATCATTGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGAAATCTCACTGTGATTCTGGCTTAGTTGTAGTGTATCATTGAA  779

seq1  CCAGGCTGGCGTCATTGTGATCTCTCTGTGCATGTAGGATGGGGAAAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGGCGTCATTGTGATCTCTCTGTGCATGTAGGATGGGGAAAAAT  829

seq1  AGGGTTATATCCATGTTTTAAGCAAACTCTTGATAATTTTTTAAAAAATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTATATCCATGTTTTAAGCAAACTCTTGATAATTTTTTAAAAAATT  879

seq1  TTCTCAGGGAAGTAATTCTATTTTTCTAGCCCAAATATATTGGGGGCAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGGGAAGTAATTCTATTTTTCTAGCCCAAATATATTGGGGGCAAA  929

seq1  TGCTTACATTTATAAAGATGTTTTATGTATAAAATTGATTCCTATATATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACATTTATAAAGATGTTTTATGTATAAAATTGATTCCTATATATA  979

seq1  GAGATTCAGCCTGAGGAGAAAGTTGGTATGAGGCAATATTTCATTGGACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCAGCCTGAGGAGAAAGTTGGTATGAGGCAATATTTCATTGGACA  1029

seq1  AATTACAACTTTCAACAAGAAAGTGCTCCAGAGAATCTATATTTTTCTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAACTTTCAACAAGAAAGTGCTCCAGAGAATCTATATTTTTCTTT  1079

seq1  AAGAAACTTTTATAATTTATTTGAATAAAAATCAAGCATTAACTACATTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTTTTATAATTTATTTGAATAAAAATCAAGCATTAACTACATTA  1129

seq1  CTCATAGTAATTAAGTTTTACTCATTTCCAGAATTC  1185
      ||||||||||||||||||||||||||||||||||||
seq2  CTCATAGTAATTAAGTTTTACTCATTTCCAGAATTC  1165

seq1: chr3_76488665_76489700
seq2: B6Ng01-158C20.g_64_1091

seq1  GAATTCTCTTTGCTCTTAGAACATCTTGCTTGTCTTGTTTCTGACCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTGCTCTTAGAACATCTTGCTTGTCTTGTTTCTGACCCATA  50

seq1  CTTTGTAAGATGTGGTTTTATTTCCTGAGAAAGACTTTCATATTCTCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAAGATGTGGTTTTATTTCCTGAGAAAGACTTTCATATTCTCCAA  100

seq1  GATTATCTGGTAGTTTTCTGTCAACTTGACCAAAACGAAAGTCATTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCTGGTAGTTTTCTGTCAACTTGACCAAAACGAAAGTCATTTCAG  150

seq1  AGGAGGAGACCTCAGTTGGGAAAAATGGCTCCATAAGATCTGGCTGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGACCTCAGTTGGGAAAAATGGCTCCATAAGATCTGGCTGTGGG  200

seq1  CCATTCTGTAGGGCATTTTTATATTGGTGATTGATAACCAAGAGTACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGTAGGGCATTTTTATATTGGTGATTGATAACCAAGAGTACAGC  250

seq1  TCATTGTGGTTGGTGCTATCACTAGGCTGATAGTCCTGGAATCTAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTGGTTGGTGCTATCACTAGGCTGATAGTCCTGGAATCTAGAAAA  300

seq1  TGATAACTGGCCTGCCTTTATGAACACACCAGTGAATATCCTTCCTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACTGGCCTGCCTTTATGAACACACCAGTGAATATCCTTCCTCCAT  350

seq1  GGCTCTTGCATCAGCTCCTGCCATGTTTGAGTTCTTGTCCTTACTTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTGCATCAGCTCCTGCCATGTTTGAGTTCTTGTCCTTACTTCCTT  400

seq1  TGAAGATGAACAATGATGCAGAAAAGGAGGCTGAAGTAAACTCTTTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGAACAATGATGCAGAAAAGGAGGCTGAAGTAAACTCTTTCTCC  450

seq1  ACTAAGTTGCTTTGATCATAGTGTTTCACCACAGCAGTACTAACTCAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTTGCTTTGATCATAGTGTTTCACCACAGCAGTACTAACTCAAAT  500

seq1  TAAGACAAAGAGTAAACATAATCCATTCCCTATGGTAGTTTGTACCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAAGAGTAAACATAATCCATTCCCTATGGTAGTTTGTACCTAAT  550

seq1  AAAATATTGTGCACACACATTAAAGGAAGGCATGAATTCATGGAGATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTGTGCACACACATTAAAGGAAGGCATGAATTCATGGAGATCTT  600

seq1  AACATATTATATACAATTAATTTGCATAAGTTAGTACATGCAAGACACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTATATACAATTAATTTGCATAAGTTAGTACATGCAAGACACCT  650

seq1  TTATTTGTAACTTGAATGATTTAATGTGGTCTTCAGAAACCCTCTATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTAACTTGAATGATTTAATGTGGTCTTCAGAAACCCTCTATGAG  700

seq1  AGATCACTCAGGTGATATGTTTTTTTTTTTTTTTTTTTTTGATTTTTCCA  750
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGATCACTCAGGTGATATG-TTTTTTTTTTTTTTTTTTTTGATTTTTCCA  749

seq1  GACATGGTTTCTCTGTGTAGCTCTGGCTATCCTGAAACTCACTCTGTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGTTTCTCTGTGTAGCTCTGGCTATCCTGAAACTCACTCTGTAGA  799

seq1  CCAGGCTGGCCTCAAACTCAGAAATTCACCTGCCTCTGCCTCCCAAGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGGCCTCAAACTCAGAAATTCACCTGCCTCTGCCTCCCAAGTGC  849

seq1  TGGGATTAAAGGCGTGTGTCACCACAACCCAGCAGGTGTTATAATTTTAA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGGGATTAAAGGCGTGTGTCACCACAACCCAGCA-GTGTTATAATTTTAA  898

seq1  AGAAGAGAAATACAGACCCTGCAAAATTCAAATTTAGCATGTGGTGAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAAATACAGACCCTGCAAAATTCAAATTTAGCATGTGGTGAGAT  948

seq1  CTGAAAGCAGACATCCCAACCCTGGGCCCATATTTTTAGTCTTTATCTGC  1000
      ||||||||||||||||| |||||||||||||| |||||||| ||||||||
seq2  CTGAAAGCAGACATCCC-ACCCTGGGCCCATA-TTTTAGTC-TTATCTGC  995

seq1  AAATTCCTCAGTAGTCATTGATAGATTTGTAGCCTC  1036
      ||||||||||||||||| ||| ||| ||||||||||
seq2  AAATTCCTCAGTAGTCA-TGA-AGA-TTGTAGCCTC  1028