BAC Information

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BAC

Clone NameB6Ng01-158F02
Chromosome3 (Build37)
Map Location 41,059,224 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158F02.bB6Ng01-158F02.g
ACCDH952299DH952300
length986881
definitionDH952299|Mus musculus domesticus DNA, BAC clone: B6Ng01-158F02, 5' end.DH952300|Mus musculus domesticus DNA, BAC clone: B6Ng01-158F02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttatctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatgtgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgactgtgtcttatgccttacagaatctttgcaattttat
gaagtcccatttgttgattcttgatcttacagcacaagccattgctgttc
tattcagaaaaatttcccctgtacccataacttcgagacttttccccact
ttctcctctataagtttcactgtctctggatttatgtggagttccttgat
ccaccttagatttgaccttagtacaagaaaataggaatggatcaactcac
attcttcgacatgataacctccagttgtgccagcaccatttattgaaaag
gctgtcttttttcgactggatgtttttaggtcctttgtcaaagatcaagt
gaccataggtgtgtgggttcatttttgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
actgtagtacagctttaggttaggcatcgtgattccaccagagattcttt
atccttgagaagagtttttgctatcctaggatttttgtttttttccagat
gaatttgcagattgccctttctaatttgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttactatattgatcctgctaatccatgagcatgggagatctttccatct
tctgagatcttctctaatttctttcttcagagattagaagttcttatcac
acagatctttcacttccttagttagagtcacgccaaggtattttatatta
tttgtgactattgagaaggtgtgtttccctaatttc
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaatatcctttcccaatctgttggtggtct
ttttgtcttactgacggtgtcttttgccttgcagaaactttgtagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctccaagatataagatacaatttcctaaacacatgaaactcaagaaa
aatgaagactgaagtgtggacactatgcccctccttagaagtgggaacaa
aacacccatggaaggagttacagagacaaagtttggagctgagatgtaag
gatggaccatgtagagactgccatatccagggatccaccccataatcagc
atccaaacgctgacaccattgcatacactagcaagattttcttgaaagga
cccagatgtagctgtctcttgtgagactatgccgggccctagcaaacaca
gaagtggatgctcacagtcagctaatggatggatcacagggctcccaatg
gaggagctagagaaagtagccaaggagctaaagggatctgcaaccctata
ggtggaacaacattatgaactaaccagtaccccggagctcttgactctag
ctgcatatgtatcaaaagatggcctagtcggccatcactggaaagagagg
cccatgggacacgcaaactttatatgccccagtacaggggaacgccagag
ctaaaaaggggagtgggtggggtaggggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059224_41059737
seq2: B6Ng01-158F02.b_48_562 (reverse)

seq1  CCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCA  50
      |||||||||||||||||||||||||| ||||| ||| |||||| ||||||
seq2  CCACACACCTATGGTCACTTGATCTTTGACAAAGGACCTAAAAACATCCA  50

seq1  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGT  100
      || ||||||||||||| ||||||| |||||||||||||||||||||  ||
seq2  GTCGAAAAAAGACAGCCTTTTCAATAAATGGTGCTGGCACAACTGGAGGT  100

seq1  TATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAG  150
      |||||||| |||||||| || |||||||| |||||| | |||||||||||
seq2  TATCATGTCGAAGAATGTGAGTTGATCCATTCCTATTTTCTTGTACTAAG  150

seq1  GTCAAATCTAA-GTGGATCAAGGAACGCCACATAAAACCAGAGACACTGA  199
      ||||||||||| |||||||||||||| ||||||||| ||||||||| |||
seq2  GTCAAATCTAAGGTGGATCAAGGAACTCCACATAAATCCAGAGACAGTGA  200

seq1  AACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGG  249
      |||||||||||||||||||||||||||| || |||| |||||  ||||||
seq2  AACTTATAGAGGAGAAAGTGGGGAAAAGTCTCGAAGTTATGGGTACAGGG  250

seq1  GAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAAT  299
      ||||  || ||| ||||||||||||||||||||||||||||||  |||||
seq2  GAAATTTTTCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCAAGAAT  300

seq1  AGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACA  349
        ||||||||||| |||| ||| ||||||| ||||| |||||| ||||||
seq2  CAACAAATGGGACTTCATAAAATTGCAAAGATTCTGTAAGGCATAAGACA  350

seq1  CCGTCAATAAGACAAAAAG-GCACCAACAGATTGGGAAAGGATCTTTACC  398
      | |||||||||||||||||  |||||||||||||||||||||||||||||
seq2  CAGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACC  400

seq1  TATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAA  448
      |||||||||||| |||||||||||||||||||||||||| ||||||||||
seq2  TATCCTAAATCACATAGGGGACTAATATCCAATATATATAAAGAACTCAA  450

seq1  GAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAG  498
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  GAAGGTGGACTCCAGAAAATCAAATAACCCCATT-AAAAATGGGGCTCAG  499

seq1  AGCTAAACAAAGAATT  514
      || |||||||||||||
seq2  AGATAAACAAAGAATT  515