BAC Information

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BAC

Clone NameB6Ng01-158G12
Chromosome10 (Build37)3 (Build37)
Map Location 96,365,355 - 96,366,18141,059,078 - 41,059,737
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEea1, EG432491, LOC667380, Btg1, LOC628256
Downstream gene4930556N09Rik, EG667407, Dcn, Lum, Kera, Epyc, 4921510H08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158G12.bB6Ng01-158G12.g
ACCDH952361DH952362
length999977
definitionDH952361|Mus musculus domesticus DNA, BAC clone: B6Ng01-158G12, 5' end.DH952362|Mus musculus domesticus DNA, BAC clone: B6Ng01-158G12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(96,365,355 - 96,366,181)(41,059,078 - 41,059,737)
sequence
gaattcaacgtatactcttatgccaggaccattatcttgattctaaaaga
tttgtagtaattcttgaaaatgagaagtgtgagtcctctaattttgttct
tttttaaattgtttcagaggctgtgagttttcctgtgcaggtgattgaca
gacatgtttcgattgactcgtaagggagggaaactggctttctttgttct
ttactagaaagactctagctaggtaataattttacaacatcttcacccta
gcctagatacaattcacattctattcatcctccacatcggcctcttcttt
gtcttcctccacttccttgaaataatatttttattaattccttgagaaat
tcatacatacatgcaacatattttgatcatattaattccacaatctttac
ctcatgtccacgcacatttaccccagttcttacgttatcttctcctttcc
acttcttctttctcctcctcatgttcctcctccttctcctcttctattat
ccatcgggtctgattcatgctacccatatactcatgaggtcatccattgg
agtatggtcttcctaccagaagacagagacaaacccttaaagaaaactaa
ttatccctcagaaactgtcaactgtcacagctcaatgtgggggtacatga
acctttccctcctttaattctggagtgctgacaggcattttccaggtaac
tatagatgctgtgagttaatgaaagcagtggtcctgttgtttccaaaaga
caccatttttccctctatgtccttcctaatacctggcttttacagttttc
tactctttttgttgtgatagtccctgagctttggggtcactttgaaatag
atgtgccatttgtggctgagcactccacacacatttattctctgcacttt
gatcatttataagtgtctgtagtacttttctatattatctatattctgta
ttatcatcctctactgcaaagaaactttttcatgaggactgacagctac
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattattcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtgaccgt
tttgtcttattgatggtatcttttgccttacagaagctttgcaattttat
gaggtcccatttgtcgattctcgatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtgcctatatctttgaggcttttccccact
ttctcctctacaagtttcactgcctctggttttatgtggagttccttaat
ccacttagattttttaccttagtacaaggagataggaatggatcaatttg
cattcttctacatgataaccaccagttgtgccagcaccatttgttgaaaa
tgctgtctttttttcactggatggttttagctcccttgtcaaagatcaag
tgactacaggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtcactataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagttttttgctatcctatgttttttgttattccaga
agaatttgcagattgccctttctaattcgttgaagaattgagttggaatt
ttgatggggattgcactgaatctgtagattgattttgacaagatagccat
ttttactatattgatcctgctaatccatgagcatgggagatcttttcatc
ttctgagatcttctttaattactttcttcagagacttgaagttctcatca
tacagatcttcacttccttagtagagtcaagccaagtgtggatttaggtt
gtgccgcagtcagtacctttaatggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_96365355_96366181
seq2: B6Ng01-158G12.b_49_875

seq1  GAATTCAACGTATACTCTTATGCCAGGACCATTATCTTGATTCTAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGTATACTCTTATGCCAGGACCATTATCTTGATTCTAAAAGA  50

seq1  TTTGTAGTAATTCTTGAAAATGAGAAGTGTGAGTCCTCTAATTTTGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGTAATTCTTGAAAATGAGAAGTGTGAGTCCTCTAATTTTGTTCT  100

seq1  TTTTTAAATTGTTTCAGAGGCTGTGAGTTTTCCTGTGCAGGTGATTGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAATTGTTTCAGAGGCTGTGAGTTTTCCTGTGCAGGTGATTGACA  150

seq1  GACATGTTTCGATTGACTCGTAAGGGAGGGAAACTGGCTTTCTTTGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTTTCGATTGACTCGTAAGGGAGGGAAACTGGCTTTCTTTGTTCT  200

seq1  TTACTAGAAAGACTCTAGCTAGGTAATAATTTTACAACATCTTCACCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGAAAGACTCTAGCTAGGTAATAATTTTACAACATCTTCACCCTA  250

seq1  GCCTAGATACAATTCACATTCTATTCATCCTCCACATCGGCCTCTTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGATACAATTCACATTCTATTCATCCTCCACATCGGCCTCTTCTTT  300

seq1  GTCTTCCTCCACTTCCTTGAAATAATATTTTTATTAATTCCTTGAGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCTCCACTTCCTTGAAATAATATTTTTATTAATTCCTTGAGAAAT  350

seq1  TCATACATACATGCAACATATTTTGATCATATTAATTCCACAATCTTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACATACATGCAACATATTTTGATCATATTAATTCCACAATCTTTAC  400

seq1  CTCATGTCCACGCACATTTACCCCAGTTCTTACGTTATCTTCTCCTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTCCACGCACATTTACCCCAGTTCTTACGTTATCTTCTCCTTTCC  450

seq1  ACTTCTTCTTTCTCCTCCTCATGTTCCTCCTCCTTCTCCTCTTCTATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTCTTTCTCCTCCTCATGTTCCTCCTCCTTCTCCTCTTCTATTAT  500

seq1  CCATCGGGTCTGATTCATGCTACCCATATACTCATGAGGTCATCCATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCGGGTCTGATTCATGCTACCCATATACTCATGAGGTCATCCATTGG  550

seq1  AGTATGGTCTTCCTACCAGAAGACAGAGACAAACCCTTAAAGAAAACTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGTCTTCCTACCAGAAGACAGAGACAAACCCTTAAAGAAAACTAA  600

seq1  TTATCCCTCAGAAACTGTCAACTGTCACAGCTCAATGTGGGGGTACATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCCTCAGAAACTGTCAACTGTCACAGCTCAATGTGGGGGTACATGA  650

seq1  ACCTTTCCCTCCTTTAATTCTGGAGTGCTGACAGGCATTTTCCAGGTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCCCTCCTTTAATTCTGGAGTGCTGACAGGCATTTTCCAGGTAAC  700

seq1  TATAGATGCTGTGAGTTAATGAAAGCAGTGGTCCTGTTGTTTCCAAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATGCTGTGAGTTAATGAAAGCAGTGGTCCTGTTGTTTCCAAAAGA  750

seq1  CACCATTTTTCCCCCTATGTCCTTCCTAATACCTGGCTTTTACAGTTTTC  800
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CACCATTTTTCCCTCTATGTCCTTCCTAATACCTGGCTTTTACAGTTTTC  800

seq1  TACTCTTTTTGTTGTGATAGTCCCTGA  827
      |||||||||||||||||||||||||||
seq2  TACTCTTTTTGTTGTGATAGTCCCTGA  827

seq1: chr3_41059078_41059737
seq2: B6Ng01-158G12.g_69_730 (reverse)

seq1  TTCTCAAGGATAACAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAG  50
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAG  50

seq1  CTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTGA  100

seq1  CAGACAAGCAGACCAATGGAATAGAATTGAAGACTCAGAAACGAATCCAC  150
      |||||||| ||||||||||||||||||||||||| |||||| ||| ||||
seq2  CAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCAC  150

seq1  ACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGG  200
      |||||| | ||||||||||||| |||||||||||||||||||||||||| 
seq2  ACACCTGTAGTCACTTGATCTTTGACAAGGGAGCTAAAACCATCCAGTGA  200

seq1  AAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATC  250
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTATC  250

seq1  ATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGT--  298
      |||||||||||||| |||||||||| ||||||||||||||||||||||  
seq2  ATGTAGAAGAATGCAAATTGATCCATTCCTATCTCCTTGTACTAAGGTAA  300

seq1  CAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAAC  348
       |||||||||||||| ||||||| |||||||||||||||| || ||||||
seq2  AAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGGCAGTGAAAC  350

seq1  TTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAA  398
      || |||||||||||||||||||||||||  ||||||| | ||||||||||
seq2  TTGTAGAGGAGAAAGTGGGGAAAAGCCTCAAAGATATAGGCACAGGGGAA  400

seq1  AAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGA  448
      ||||||||| |||||||||||||||||||||||||||||| |||||| ||
seq2  AAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATCGA  450

seq1  CAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCG  498
      ||||||||||||||| ||| ||||||||||||| ||||||||||| ||| 
seq2  CAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGATACCA  500

seq1  TCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCTAT  547
      |||||||||||||| || ||||||||||||||||||||||||||||||||
seq2  TCAATAAGACAAAACGGTCACCAACAGATTGGGAAAGGATCTTTACCTAT  550

seq1  CCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAGAA  597
      |||||||||||||||||| ||||||||||||||||| |||||||||||||
seq2  CCTAAATCAGATAGGGGAATAATATCCAATATATATAAAGAACTCAAGAA  600

seq1  GGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGC  647
      |||||| |||||||||||||||||||||||| ||||||||||||||||||
seq2  GGTGGACTCCAGAAAATCAAATAACCCCATT-AAAAATGGGGCTCAGAGC  649

seq1  TAAACAAAGAATT  660
      |||||||||||||
seq2  TAAACAAAGAATT  662