BAC Information

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BAC

Clone NameB6Ng01-158M16
Chromosome3 (Build37)
Map Location 18,126,060 - 18,127,217
singlet/doubletsinglet
Overlap geneCyp7b1
Upstream geneEG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5
Downstream geneLOC622921, LOC100040153, Armc1, Mtfr1, Pde7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158M16.bB6Ng01-158M16.g
ACCDH952647DH952648
length1,1381,170
definitionDH952647|Mus musculus domesticus DNA, BAC clone: B6Ng01-158M16, 5' end.DH952648|Mus musculus domesticus DNA, BAC clone: B6Ng01-158M16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacacctgtaatttcagcatttttgaaagtgcgggaaggagacct
gaagttcaggtcagcttgccaacatcccaagatcctgtatggaaaaacaa
aacaaacaagtctaataccatattttaatatatcatatataaattcaatg
gagcgcttgttataaaaaggaagcagagggtgagatatttgactttctca
ttttacttgctaagaataagccagaaaggcattgtcagcgtgagtgggaa
tggggtgctcacctcagaaataaaggggatttgaatacttgcccctctac
taactggaagtaaggctttcagcaaaatagtttacctccaaagacaggag
ttatagagaaagatgggcgatttcgagaaaatcccatggctccacctatg
atggaggcaaacgtacttctcaagtaatactgttctccatgaaagtggga
aatactgaggtaaacacaaaacagaatatgttccagatcagtgtctcagg
acttcacaatgaagttaggaagtaaatagaatatccaaagttcacacttc
cctctctatgaattcaaggttgcttattgcctatagtcctcagttttaca
cactttgtttcattcacacattctactaaggttgctctttgtattgagag
gagaattaaaactattggtgcatgtgactgtaggaatttccatcctattt
ctctaaatctttggtcttcccattctgagctaaaactatttattggctga
ctaatgtttgaatgtattgttagctactgattatgcagcaatggaagtca
caaagaacccaaacccacagagacatacataatttagcaattccaccaca
caaaagggtgctattgggatagagctaccccagaaatatagtagcagatt
gggttggagtagtaactattggcttttgatgattaggatgagcaagtaaa
gagaggagagattcctgtttctgttttaataaaagttaggtttctgttca
aggtgagcctactttatggaaatgtacatgtgcatgtttatgagatacat
gtcctttgtattcctctttggaatgtaatgttgaatatttttatactcca
gccttatgattggggtaggagtaaacagtggaggcagc
gaattcttgttagaacaatctcaaatggccgaggaatacttaaagaagtg
tttgatatctttacacatgagggaaatcaaaatcaaaattactctgaaat
gtcatcttactgctgtcagaatagacaagaccagtaacacaatgacagct
catgctgtgagaatgtggagcaagggcaacactccattactgctggtggg
agtgcaaacttgtacagcaactatggaaatccatattgtgttttctcaaa
aaaaattgagaattgatctccctcaagataaattctatactactatacta
ctcttgggcatatatttaataaatgctccattctaaccccaggatgcttg
ctctactatgttcacaatggttttattcataatggtaagaaatggagggc
acagcataaatcttgccctgaagggaaaagtgggtggactggggcagata
ggaatgggaacagaagggatcaggtagggatgaagggagacagtgtgagg
aaagataactagaataggtgggcatttaggcagtgatgtgcaagcctagt
gcagtggaaacttgctggaaattatgaggatcactccagtgaggattgct
agtaattgttgatatggagcctgaaccagccatcggtaatcagacaagga
tttcagtgtttgaactggggtaccaacccagccacaaaaaccattgactt
ctcctgcctgaaagatgtactggaccaatggtagctcagagcttgtgaaa
ggggccaaccaatgactggcttactttgaggcccattccaagagagggag
cctatgcccaatcctgcatgattggtcagatttggaagctggatggctca
gtgacctaaggtagaaccaacacaactgacaaaaaaagtcaatgaatgat
tcacaattatattctgcatactcatagattgatacctagcttaattgtca
tcagagagtttcttcagcacctgaatggtaacatacagaaatccatagcc
gaatatagcagagcctcggaaagccacagagatgaggagaagactattgg
aggtagaggtaaagagtcgccagaaacctgcctagaatcatctaagcagg
ctctagggccacaaaaactagggacaaacacgaacccttaaggtttgtta
ggctctgaaatattacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18126060_18127217
seq2: B6Ng01-158M16.b_45_1182 (reverse)

seq1  GCTGCCTCCACTTGTTTTTACTTCCCTACCCCAAAATCACTAAGACT-GA  49
      |||||||||||   | ||||||  ||||||||  ||||| |||| || ||
seq2  GCTGCCTCCAC---TGTTTACT--CCTACCCC--AATCA-TAAGGCTGGA  42

seq1  GTATAAAAATTAATGTCCATACATTACATTTCCAAAGA-GAATACAAA-G  97
      |||||||    ||| | || |||||||| ||||||||| ||||||||| |
seq2  GTATAAA----AATATTCA-ACATTACA-TTCCAAAGAGGAATACAAAGG  86

seq1  ACATGTATCTCATAAACATTGCACATGTAACATTTCCAATAAAGTAGGCT  147
      |||||||||||||||||| ||||||||| |||||||| ||||||||||||
seq2  ACATGTATCTCATAAACA-TGCACATGT-ACATTTCC-ATAAAGTAGGCT  133

seq1  CAACCCTTGAACAGAAACCTAACCTTTTATTTAAAACAGAAACAGGAATC  197
      ||  |||||||||||||||||| |||||| ||||||||||||||||||||
seq2  CA--CCTTGAACAGAAACCTAA-CTTTTA-TTAAAACAGAAACAGGAATC  179

seq1  TCTCCTCTCTTTACTTGCTTCATCCTAATCATCAAAAGCCAATAGTTACT  247
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTCCTCTCTTTACTTGC-TCATCCTAATCATCAAAAGCCAATAGTTACT  228

seq1  ACTCCAACCCAATCCTGCTACTATATTTCTGGGGTAGCTCTATCCCAATA  297
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACTCCAACCCAAT-CTGCTACTATATTTCTGGGGTAGCTCTATCCCAATA  277

seq1  GCACCCTTTTGTGTGGTGGAATTGCTAAATTATGTATGTCTCTGTGGGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCTTTTGTGTGGTGGAATTGCTAAATTATGTATGTCTCTGTGGGTT  327

seq1  TGGGTTCTTTGTGACTTCCATTGCTGCATAATCAGTAGCTAACAATACAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCTTTGTGACTTCCATTGCTGCATAATCAGTAGCTAACAATACAT  377

seq1  TCAAACATTAGTCAGCCAATAAATAGTTTTAGCTCAGAATGGGAAGACCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACATTAGTCAGCCAATAAATAGTTTTAGCTCAGAATGGGAAGACCA  427

seq1  AAGATTTAGAGAAATAGGATGGAAATTCCTACAGTCACATGCACCAATAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTAGAGAAATAGGATGGAAATTCCTACAGTCACATGCACCAATAG  477

seq1  TTTTAATTCTCCTCTCAATACAAAGAGCAACCTTAGTAGAATGTGTGAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTCTCCTCTCAATACAAAGAGCAACCTTAGTAGAATGTGTGAAT  527

seq1  GAAACAAAGTGTGTAAAACTGAGGACTATAGGCAATAAGCAACCTTGAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAAGTGTGTAAAACTGAGGACTATAGGCAATAAGCAACCTTGAAT  577

seq1  TCATAGAGAGGGAAGTGTGAACTTTGGATATTCTATTTACTTCCTAACTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAGAGGGAAGTGTGAACTTTGGATATTCTATTTACTTCCTAACTT  627

seq1  CATTGTGAAGTCCTGAGACACTGATCTGGAACATATTCTGTTTTGTGTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGAAGTCCTGAGACACTGATCTGGAACATATTCTGTTTTGTGTTT  677

seq1  ACCTCAGTATTTCCCACTTTCATGGAGAACAGTATTACTTGAGAAGTACG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGTATTTCCCACTTTCATGGAGAACAGTATTACTTGAGAAGTACG  727

seq1  TTTGCCTCCATCATAGGTGGAGCCATGGGATTTTCTCGAAATCGCCCATC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCCATCATAGGTGGAGCCATGGGATTTTCTCGAAATCGCCCATC  777

seq1  TTTCTCTATAACTCCTGTCTTTGGAGGTAAACTATTTTGCTGAAAGCCTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTATAACTCCTGTCTTTGGAGGTAAACTATTTTGCTGAAAGCCTT  827

seq1  ACTTCCAGTTAGTAGAGGGGCAAGTATTCAAATCCCCTTTATTTCTGAGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAGTTAGTAGAGGGGCAAGTATTCAAATCCCCTTTATTTCTGAGG  877

seq1  TGAGCACCCCATTCCCACTCACGCTGACAATGCCTTTCTGGCTTATTCTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACCCCATTCCCACTCACGCTGACAATGCCTTTCTGGCTTATTCTT  927

seq1  AGCAAGTAAAATGAGAAAGTCAAATATCTCACCCTCTGCTTCCTTTTTAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTAAAATGAGAAAGTCAAATATCTCACCCTCTGCTTCCTTTTTAT  977

seq1  AACAAGCGCTCCATTGAATTTATATATGATATATTAAAATATGGTATTAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCGCTCCATTGAATTTATATATGATATATTAAAATATGGTATTAG  1027

seq1  ACTTGTTTGTTTTGTTTTTCCATACAGGATCTTGGGATGTTGGCAAGCTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTGTTTTGTTTTTCCATACAGGATCTTGGGATGTTGGCAAGCTG  1077

seq1  ACCTGAACTTCAGGTCTCCTTCCCGCACTTTCAAAAATGCTGAAATTACA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAACTTCAGGTCTCCTTCCCGCACTTTCAAAAATGCTGAAATTACA  1127

seq1  GGTGTGAATTC  1158
      |||||||||||
seq2  GGTGTGAATTC  1138