BAC Information

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BAC

Clone NameB6Ng01-158O02
Chromosome3 (Build37)
Map Location 112,126,273 - 112,127,461
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625585, EG229746
Downstream geneLOC668717, Utp14B-ps, EG433643, OTTMUSG00000022462, LOC668723, Amy2-2, Amy2-1, LOC100043684, LOC100043686
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158O02.bB6Ng01-158O02.g
ACCDH952707DH952708
length1,1731,155
definitionDH952707|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O02, 5' end.DH952708|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgagcttagatcaattatttaaattgtcttataatttctttgg
tgtgaaacaatgtctcaccattacattattataactacagtattaaaata
aaataatatgaacagagaatttgaataatatctaatcctcttcaggtttc
aattggcatttgcttttacatttagttactcaaacttcccaatgagatta
ccaatgtaattgaaatgaacatttgcctagtctgttaaatacaaatatca
ctaaattgcccttttataaggtgcaccaatgggtatagcactgcctccta
gtttacatagtttagtgtattagaaaacaggatttagatgcctacatgca
ttcagaggatataaaggacattgtgtttttcagaagactcagagatagtt
aaacaccaatgccaaggtgctttcctttattcttttggttcactgatatg
aatcaatttattttagagggttttcccctttatgttcatgtcagaagtaa
gtttttaactcattatttattttctttttattatttaaatcaatttaaat
tttaaatatattttgattttatttttcctctcttccaaatactttcagat
cttttcccctttcctaccatttcagcttgaagttctttctccaaaaagca
aacaacgaacacacacagaaacaaacaaaaaaccaattgagcaacaaaat
acagcaagacaaaaaaatacaaatatctcacaatcaaaccaaataaaagc
acacaaaaggagctgaattggaaaattaaaatttatgttcatatgtctga
gttaaatcagaaatgatggaaaaaataagaattagatacattattgtgtt
gtcaagataggtgtgagagtcttaaagacaatcttaatggtgatcagtaa
gaatctagttttttttaagtctaggctttgagaaggacctctgttttctt
atactatttctcctttgttatttgacaggtgaacgtgtactttcaatgtc
acattttttttatttcatagtcataaaaaattaaaaacgcttaatatctt
tggcttactgcctagcctggattatttttctttatcattgttggtctttt
ggagaagatctttgatggagtggctttgatgttttccaatgtattgttga
tagcattgacttctttggatcaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggttaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtgatacatctacacaatg
gagtacgactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atgaatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggattcaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcttagcaaac
acagaagtggatgctcacagtcagctaatggatgatcacaggctcccatg
agagctagagaagtacccaagactaaagggatctgcaccctatagtggat
cacatatgaacaacagtacactgagctctgactctagctgcatatgtatc
aaagatgctagtcgccatcctgaacagaagtccatgacagcacttatatg
gctcagtacagggacgccaagtctaaaaggggtgggctgctaggggaagt
gggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_112126273_112127461
seq2: B6Ng01-158O02.b_48_1220 (reverse)

seq1  TTGATCACAAAGAAGTCAATGCTTATCAAACAAAATACATATTGGAAAAA  50
      |||||| ||||||||||||||| |||||   | |||||  ||||| ||||
seq2  TTGATC-CAAAGAAGTCAATGC-TATCA---ACAATAC--ATTGG-AAAA  42

seq1  CAATACAAAACCCACACTCCAATTACAAGATC-TCTCCAAAAGAACCAAC  99
      ||   |||| |   |||||||  |  |||||| |||||||||| ||||||
seq2  CA--TCAAAGC---CACTCCA--TCAAAGATCTTCTCCAAAAG-ACCAAC  84

seq1  AAATTGATAAAGAAAATAAATCAAGCTAAGGCAGTAAG-CAAAGATATAA  148
      ||  ||||||||||||  |||| ||   |||||||||| ||||||||| |
seq2  AA--TGATAAAGAAAAATAATCCAGGCTAGGCAGTAAGCCAAAGATATTA  132

seq1  AGCGTTTTTAATTTTTTATGACTATGAAAT-AAAAAAATGTGACATTGAA  197
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGCGTTTTTAATTTTTTATGACTATGAAATAAAAAAAATGTGACATTGAA  182

seq1  AGTACACGTTCACCTTGTCAAATAACAAAGGAGAAATAGTATAAGAAAAC  247
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGTACACGTTCACC-TGTCAAATAACAAAGGAGAAATAGTATAAGAAAAC  231

seq1  AGAGGTCCTTCTCAAAGCCTAGACTTAAAAAAAACTAGATTCTTACTGAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCCTTCTCAAAGCCTAGACTTAAAAAAAACTAGATTCTTACTGAT  281

seq1  CACCATTAAGATTGTCTTTAAGACTCTCACACCTATCTTGACAACACAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTAAGATTGTCTTTAAGACTCTCACACCTATCTTGACAACACAAT  331

seq1  AATGTATCTAATTCTTATTTTTTCCATCATTTCTGATTTAACTCAGACAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATCTAATTCTTATTTTTTCCATCATTTCTGATTTAACTCAGACAT  381

seq1  ATGAACATAAATTTTAATTTTCCAATTCAGCTCCTTTTGTGTGCTTTTAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATAAATTTTAATTTTCCAATTCAGCTCCTTTTGTGTGCTTTTAT  431

seq1  TTGGTTTGATTGTGAGATATTTGTATTTTTTTGTCTTGCTGTATTTTGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTGATTGTGAGATATTTGTATTTTTTTGTCTTGCTGTATTTTGTT  481

seq1  GCTCAATTGGTTTTTTGTTTGTTTCTGTGTGTGTTCGTTGTTTGCTTTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATTGGTTTTTTGTTTGTTTCTGTGTGTGTTCGTTGTTTGCTTTTT  531

seq1  GGAGAAAGAACTTCAAGCTGAAATGGTAGGAAAGGGGAAAAGATCTGAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGAACTTCAAGCTGAAATGGTAGGAAAGGGGAAAAGATCTGAAA  581

seq1  GTATTTGGAAGAGAGGAAAAATAAAATCAAAATATATTTAAAATTTAAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGGAAGAGAGGAAAAATAAAATCAAAATATATTTAAAATTTAAAT  631

seq1  TGATTTAAATAATAAAAAGAAAATAAATAATGAGTTAAAAACTTACTTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAAATAATAAAAAGAAAATAAATAATGAGTTAAAAACTTACTTCT  681

seq1  GACATGAACATAAAGGGGAAAACCCTCTAAAATAAATTGATTCATATCAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAACATAAAGGGGAAAACCCTCTAAAATAAATTGATTCATATCAG  731

seq1  TGAACCAAAAGAATAAAGGAAAGCACCTTGGCATTGGTGTTTAACTATCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAAAAGAATAAAGGAAAGCACCTTGGCATTGGTGTTTAACTATCT  781

seq1  CTGAGTCTTCTGAAAAACACAATGTCCTTTATATCCTCTGAATGCATGTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCTTCTGAAAAACACAATGTCCTTTATATCCTCTGAATGCATGTA  831

seq1  GGCATCTAAATCCTGTTTTCTAATACACTAAACTATGTAAACTAGGAGGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTAAATCCTGTTTTCTAATACACTAAACTATGTAAACTAGGAGGC  881

seq1  AGTGCTATACCCATTGGTGCACCTTATAAAAGGGCAATTTAGTGATATTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTATACCCATTGGTGCACCTTATAAAAGGGCAATTTAGTGATATTT  931

seq1  GTATTTAACAGACTAGGCAAATGTTCATTTCAATTACATTGGTAATCTCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAACAGACTAGGCAAATGTTCATTTCAATTACATTGGTAATCTCA  981

seq1  TTGGGAAGTTTGAGTAACTAAATGTAAAAGCAAATGCCAATTGAAACCTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGTTTGAGTAACTAAATGTAAAAGCAAATGCCAATTGAAACCTG  1031

seq1  AAGAGGATTAGATATTATTCAAATTCTCTGTTCATATTATTTTATTTTAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGATTAGATATTATTCAAATTCTCTGTTCATATTATTTTATTTTAA  1081

seq1  TACTGTAGTTATAATAATGTAATGGTGAGACATTGTTTCACACCAAAGAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAGTTATAATAATGTAATGGTGAGACATTGTTTCACACCAAAGAA  1131

seq1  ATTATAAGACAATTTAAATAATTGATCTAAGCTCATGAATTC  1189
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAGACAATTTAAATAATTGATCTAAGCTCATGAATTC  1173