BAC Information

Click to search

BAC

Clone NameB6Ng01-159G20
Chromosome3 (Build37)
Map Location 41,059,151 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159G20.bB6Ng01-159G20.g
ACCDH953095DH953096
length9121,198
definitionDH953095|Mus musculus domesticus DNA, BAC clone: B6Ng01-159G20, 5' end.DH953096|Mus musculus domesticus DNA, BAC clone: B6Ng01-159G20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctaagccccattttttaatggtgttatttgatt
ttctggagtctaccatctagagttctttatatatattagatattagtccc
ctatctgatttaggataggtcaaggtcctttcccaatctgttggtggcct
ttttgtcttattgatggtgtcttttgccttacagaagctttgcagtttta
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttctcctgtgcccatatctttgaggtgtttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttaa
tccacttagatttgaccttagtacaaggagataggaatggatcaatttgc
attcttctacatgataaccacctgttgtgccagcaccacttgttgaagag
gctgtcctttttccactggatggttttagttcccttgtcaaagatcaagt
gaccataggcgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcgctataccaataccatgcatttttttttgtttgttt
gtttgtttgtttgtttgtttttttttttaatcacaattgctctgtagtac
agctttaggtcaggcatggtgattccactggaggttttttcatccttgag
aagagtttttgctatcctacgttttttgttattccagatgaattttaaca
ttgccctttctaaatcgttgaagaattgagttgggattttgatggggatt
acattgaatctgtagattgcttttggcaagatagccatttttactatatt
tattctgcccagccatgagcatgggaaatctttctgtcttctgagatctt
ctttatttcttt
gaattctcatctgaggaatacctaatggctgagaaggacctgaaaaatat
gttccgcatacttaatcatcagagaaacacaaatttaaacaacccccaga
taccatctcacaccagtcagaatgggtaagtacaaaaattcaagtgacag
cagatgctggcgagtatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccagaggatcccgcaatacctcttctggg
catatatccagaagatgttccaactggtaagaagtacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaaggtggtacatttacacaat
ggagtactactcagttattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaggtaacacaatcacaa
aagtaatcaaatcatatatattcactgataagtggatattagccatttat
atcttgagtatcctaagttacttaggatactcaagatataagttcttagg
atactcaagatataagttccaatttgcaaaacacatgaaactgaagaaga
acgaagaccaaagtttggacactttgccccttcttagaattgggaacaaa
acacccatggaaggagttacagagacaaaggtttggagctgagacaaaag
gatggaccatctagagactgccatatccagggatccaattccatagtcag
cctccaaaagatgacacattgcatacactagcagattttgctgaaagacc
ctgatatagctgtctcttgtgagactatgtaggcctagcaacacagaagt
gatgctccacagtcagctatggatggatcacagggcccccaatggaggag
ctacagaaagtattcaagagctaaaagagatctgcaacctaagttggaca
cttatgaacttacccgtatccccggagctcttgactcagcttgctatgat
tcaagaagtgcctattagtcatctcgtaagaaagagccatggcattgcac
ttatgccgaaccttggaactgcgctagcgcaaaatggaatgactggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059151_41059737
seq2: B6Ng01-159G20.b_47_634 (reverse)

seq1  AAAAACTGCATGGTACTGGTATAGTGACAGACAAGCAGACCAATGGAATA  50
      ||||| ||||||||| |||||||| |||||||||| ||||||||||||||
seq2  AAAAAATGCATGGTATTGGTATAGCGACAGACAAGTAGACCAATGGAATA  50

seq1  GAATTGAAGACTCAGAAACGAATCCACACACCTATGGTCACTTGATCTTC  100
      ||||||||||| |||||| ||| |||||| ||||||||||||||||||| 
seq2  GAATTGAAGACCCAGAAATGAACCCACACGCCTATGGTCACTTGATCTTT  100

seq1  GACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAA  150
      ||||||||| |||||||||||||||||||||| |||||| | ||||||||
seq2  GACAAGGGAACTAAAACCATCCAGTGGAAAAAGGACAGCCTCTTCAACAA  150

seq1  ATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATC  200
       ||||||||||||||| ||| |||||||||||||||||||| ||||||||
seq2  GTGGTGCTGGCACAACAGGTGGTTATCATGTAGAAGAATGCAAATTGATC  200

seq1  CACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACGC  250
      || ||||||||||||||||||||||||||||||||||||| |||||||  
seq2  CATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGGAACTT  250

seq1  CACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  CACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAACA  300

seq1  CCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCAATGG  350
      |||  ||||||||| |||||| |||||||||||| |||||||||||||||
seq2  CCTCAAAGATATGGGCACAGGAGAAAAATTCCTGAATAGAACAGCAATGG  350

seq1  CTTGTGCTGTAAGATTGAGAATAGACAAATGGGACCTCATGAAACTGCAA  400
      ||||||||||||||| |||||| ||||||||||||||||| |||||||||
seq2  CTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTCATAAAACTGCAA  400

seq1  AGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGG-CACCAAC  449
      |||||||| ||||||||||||||| ||||||||||||||||| |||||||
seq2  AGCTTCTGTAAGGCAAAAGACACCATCAATAAGACAAAAAGGCCACCAAC  450

seq1  AGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATAT  499
      |||||||||||||| ||| |||||||||||||||||||||||||||||||
seq2  AGATTGGGAAAGGACCTTGACCTATCCTAAATCAGATAGGGGACTAATAT  500

seq1  CCAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAATAAC  549
      | ||||||||| |||||||| ||| ||| || ||||||||||||||||||
seq2  CTAATATATATAAAGAACTCTAGATGGTAGACTCCAGAAAATCAAATAAC  550

seq1  CCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  587
       |||||||||||||||||| ||||||||||||||||||
seq2  ACCATTAAAAAATGGGGCTTAGAGCTAAACAAAGAATT  588