BAC Information

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BAC

Clone NameB6Ng01-159J19
Chromosome3 (Build37)
Map Location 28,164,680 - 28,165,274
singlet/doubletsinglet
Overlap geneTnik
Upstream geneLOC100040527, Tnfsf10, Ghsr, Fndc3b, E030011K20Rik, Pld1
Downstream geneSlc2a2, EG624446, Eif5a2, Rpl22l1, Gm1527, 6130401L20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159J19.bB6Ng01-159J19.g
ACCDH953225DH953226
length1,253914
definitionDH953225|Mus musculus domesticus DNA, BAC clone: B6Ng01-159J19, 5' end.DH953226|Mus musculus domesticus DNA, BAC clone: B6Ng01-159J19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcctggaatatttcagcttatatctgtatagtacacatttcac
cttgtataaaagttttctgctcttctagagatatatcagtttaattatgg
aaaacaaatatttaatattttctaccacccttcttcagcatgtaagaatc
aaatttatgtagctttatgtattgtgtcagactgatcagttttaaaaatg
actgtttgaactgctgagaagtgttgtgaagaattattaaatgaatttgc
ttgagattagggcagaacgtccaatgattttttgaaatggtcctaaacac
acttttgtcacaaaaccacaattctctgcatacttacatgaagttgcagt
cttaggatttatagttaaaaattaaaatatcaggtttggaatgatggtag
attcagtaaagtgactgtctcacaagcatggggacctgaatttagatatc
tgcttgcacataagagctgggcacagtgggggtgtacatctgtaacccta
cttagggtgtgtggtatgttaaaaaatagacagatacacaaagctcattg
gttggcaagcctcactgaatggatgagatacaagaccagtgagagactat
ctccacacctaaggtagagaacggtctaggacacacccactgttgacctt
tgtcttccacgtgcactcacacatgtgaaaatgcacctttatacacacat
tcacacacctacacagatactcttcccacacatacattaatgtattaggc
aactctgaaaaaaagccgaagatgctctatgtcctggaataaaattcagg
gatgattcattttttttatgtaaaaatgaatatacaaacccatctcatta
atacgcaatttttaaaattactaaaatgtggtaacattatatgcatacca
cagaattgctttgaaatgggttctttatgattaattgtcaataagacaat
ttgtatatctactttgtacatccgcacgcatgggggtttcaaaactctct
ggggttgaaagcagcctcagtgggaaaggcataggaaatcttgccaggct
tgtcctaacctctcagcattcatgccaggcttggcatgagggggaaggtt
tccacggtcgaaatcatgagcgtccactccatttctgccgattcatttca
gtgagtgagcacaggcttagcaactctctgtctgtaacaagacggctgca
gctagttccagacgtcaaaggacctattagattgagtacagtataagagt
agc
gaattctctgcctgcactggtgtgtgcaaagagctaggataacagctact
cccagtgtctgggggagctattggctggaagacttacatgcagatgggca
gacagttgtactcagcaggcctgggagcgtcaggcagtcttgtggtaggc
taggtgtgcaggtccgtttgtctccgagggccagtaggtgatgcccacaa
atggaagcgtagatggtggctgccttcccagatttggagaggttggttcc
taagcttgcagagaagtccttctgaggaaaccctgaccctgaattgcagg
caaggtcagtggtgcagccctgtcagcccctcgacatccctgtggctctt
taatgtatacaatcaatgctctttgtaagccctgggcttggtggtttaaa
agcagatcctgtctagagaggcctttctccttctgattttgggggcttat
tgttctcagtcagtgatcccagactgggcctagtctgaaattctccccaa
ttggaacaatgcataattcaaaccagagcaaccagtaccagccctgtcat
ttaagccatgcaaaatatgggtgggattttgttgttgtggtggtgctagg
atacccaagatagaagatacaattttcctaaacacatgaaactcaagaaa
aatgaagactgaagtgtgcacactatgcccctccttagaagttgggaaca
aaaacacccatgggaaggagttacagagacaaagtttgggagctgagatg
aaagggatggaccattgtagagactgccatatcccagggatccaccccca
tatcagcatcaaaacgctgacccatgcatacactagcaagattttttcga
aaggacccagatgtagctgtcttcttgtgagactatgccgccgcctagca
aacacagagtgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_28164680_28165274
seq2: B6Ng01-159J19.g_68_662

seq1  GAATTCTCTGCCTGCACTGGTGTGTGCAAAGAGCTAGGATAACAGCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCCTGCACTGGTGTGTGCAAAGAGCTAGGATAACAGCTACT  50

seq1  CCCAGTGTCTGGGGGAGCTATTGGCTGGAAGACTTACATGCAGATGGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTCTGGGGGAGCTATTGGCTGGAAGACTTACATGCAGATGGGCA  100

seq1  GACAGTTGTACTCAGCAGGCCTGGGAGCGTCAGGCAGTCTTGTGGTAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTGTACTCAGCAGGCCTGGGAGCGTCAGGCAGTCTTGTGGTAGGC  150

seq1  TAGGTGTGCAGGTCCGTTTGTCTCCGAGGGCCAGTAGGTGATGCCCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTGCAGGTCCGTTTGTCTCCGAGGGCCAGTAGGTGATGCCCACAA  200

seq1  ATGGAAGCGTAGATGGTGGCTGCCTTCCCAGATTTGGAGAGGTTGGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGCGTAGATGGTGGCTGCCTTCCCAGATTTGGAGAGGTTGGTTCC  250

seq1  TAAGCTTGCAGAGAAGTCCTTCTGAGGAAACCCTGACCCTGAATTGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTGCAGAGAAGTCCTTCTGAGGAAACCCTGACCCTGAATTGCAGG  300

seq1  CAAGGTCAGTGGTGCAGCCCTGTCAGCCCCTCGACATCCCTGTGGCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCAGTGGTGCAGCCCTGTCAGCCCCTCGACATCCCTGTGGCTCTT  350

seq1  TAATGTATACAATCAATGCTCTTTGTAAGCCCTGGGCTTGGTGGTTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTATACAATCAATGCTCTTTGTAAGCCCTGGGCTTGGTGGTTTAAA  400

seq1  AGCAGATCCTGTCTAGAGAGGCCTTTCTCCTTCTGATTTTGGGGGCTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATCCTGTCTAGAGAGGCCTTTCTCCTTCTGATTTTGGGGGCTTAT  450

seq1  TGTTCTCAGTCAGTGATCCCAGACTGGGCCTAGTCTGAAATTCTCCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCAGTCAGTGATCCCAGACTGGGCCTAGTCTGAAATTCTCCCCAA  500

seq1  TTGGAACAATGCATAATTCAAACCAGAGCAACCAGTACCAGCCCTGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACAATGCATAATTCAAACCAGAGCAACCAGTACCAGCCCTGTCAT  550

seq1  TTAAGCCATGCAAAATATGGGTGGGATTTTGTTGTTGTGGTGGTG  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCATGCAAAATATGGGTGGGATTTTGTTGTTGTGGTGGTG  595