BAC Information

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BAC

Clone NameB6Ng01-160D24
Chromosome3 (Build37)
Map Location 126,426,849 - 126,427,056
singlet/doubletsinglet
Overlap geneCamk2d
Upstream geneNdst4, Ugt8a, Arsj
Downstream geneAnk2, LOC100043749, LOC100043361, LOC100043364, Larp7, 4930422G04Rik, Neurog2, Alpk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160D24.bB6Ng01-160D24.g
ACCDH953678DH953679
length1,130208
definitionDH953678|Mus musculus domesticus DNA, BAC clone: B6Ng01-160D24, 5' end.DH953679|Mus musculus domesticus DNA, BAC clone: B6Ng01-160D24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatgcctgagaagcacctgaaaaaatt
ttcagcatccttaatcagcagaaaaatgcaaatcaaagcatccctgagat
tccaactcatatcagtcagaatgcctcagaacaaaaactcaggtgacaga
agatgctgtcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagtttgtacaaccactctggaaatcagtctggtgtttcctca
gaaaattgtactacatagtactggagtatctagcaatacctcacctaggc
atatatccagaagatgttccaactggtaagaaggacacatcctccactat
gttcatagcagccttatttataatagccagaagctggaaataacccagat
gtccctctacagaggaatggatacagaaaatgtggtacatttacaaaagg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtactcactgatacgtggatagtagcccagaaac
ttagaatacccaagatataagatacaattggaaaacatgaaactcaataa
gaaggaagaccaaagtgtggacactttttcccttcttagaattgggaaca
aagcacccatggaaaggagttacagagacaaagtttggagctgagacgaa
agaatggaccatctagaaacttccacaccgggggatctaccccataatca
gcctccaaaggctgacacattgtatacactagcaagatttgctgaaagaa
cccagatatagttgtctcttgtgagcatgctggggctagcaacacaggag
tagatgctcacagtcagctatgatgatcacagggcccccatggagagcta
gagaagtacccagagctaaagtgtctgcaacttatagtgacacatatgac
tatcagtaccctccagagctcggttctctagctgcatatgtatcagagat
gctagtgcatcatgaaagaaggccattggcttccacttatatgctcagtc
agaaacgctaggcaaaatggaatgggtggt
attgcagtctaccagtatgattaactgctcagttccataatgaaatataa
tgggggaggaggaggaggtcctgaatttgagttgtgtgggagaattataa
taataatattaagttatatatccattataaatcgcactggagttgtataa
gcaatttcataaaatcatcatgattaaccacttcgatttcataggacaga
gagtaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_126426849_126427056
seq2: B6Ng01-160D24.g_71_278

seq1  ATTGCAGTCTACCAGTATGATTAACTGCTCAGTTCCATAATGAAATATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGTCTACCAGTATGATTAACTGCTCAGTTCCATAATGAAATATAA  50

seq1  TGGGGGAGGAGGAGGAGGTCCTGAATTTGAGTTGTGTGGGAGAATTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGGAGGAGGAGGTCCTGAATTTGAGTTGTGTGGGAGAATTATAA  100

seq1  TAATAATATTAAGTTATATATCCATTATAAATCGCACTGGAGTTGTATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATATTAAGTTATATATCCATTATAAATCGCACTGGAGTTGTATAA  150

seq1  GCAATTTCATAAAATCATCATGATTAACCACTTCGATTTCATAGGACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTCATAAAATCATCATGATTAACCACTTCGATTTCATAGGACAGA  200

seq1  GAGTAAGA  208
      |||||| |
seq2  GAGTAACA  208