BAC Information

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BAC

Clone NameB6Ng01-160G16
Chromosome3 (Build37)
Map Location 41,059,187 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160G16.bB6Ng01-160G16.g
ACCDH953795DH953796
length1,183937
definitionDH953795|Mus musculus domesticus DNA, BAC clone: B6Ng01-160G16, 5' end.DH953796|Mus musculus domesticus DNA, BAC clone: B6Ng01-160G16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggtttagcttatacctcagtttttgattgagcttgatttttt
tttttggtggttaccttcttgagttttttatttattttttgatattagcc
ctctattagatgaggggttagtgaagactttttcccaatctgtaagttgc
cgatttgtcttatcgactatgtcctttgcttttcagaagctttccagttc
catgaggtcccatttatcaattcttgattttagagtgtgagccatttgag
ttctgtttaggaaatttccccctgtgccaatgatttcaagccttttttcc
actttttcttctattagatacagtatctaatatctggctttatgatgagg
tccttgatccatttggacttgagctttgtgtaaaatgacaattatgggtc
tattttgatttttctacataaagaaagccagttacaccagcaccatttat
tgaagatgctttctttttctttattgtatatttttggcttctttgtcaaa
gaccaagtgtgcataagtgtgtggttttatttctgggccttcaattctat
tcaattgatcaatgtgtttgtctctgtaccaataccatgcagttttttta
tcactattgctcttagtagagcttgaggtcagggatggtgattcccccag
aagttcttttattgttaagaattgtttatgctattctgtctttttttcgc
ctttccatatgaatttgagaaatgctttttctatgtctttagaattgtgt
tgggattttaatggggattgcattgaatctgtagattgtctttggtagga
tggccatttttactatgttaattctgtcaatccatgaggatgggagatct
ctctattttctgagatctccttcaatttctttctgagagacttcaagtta
ttgtcatacagatttttttttttttttgcttattggttagagtacaccaa
gacattttatatatttgtggattattgggaaggaattgtttccctaattc
tttttcagctttttttccattggttaagaaggctactggattatgaggtt
attttatatctgattccttgcgggagttgctaacaccgtgaagagtcctt
ggaaatttgggtgctatggttctaccatactcgacgaacctattctcctg
caatgtattgccgaactcttgttgtgagttcta
gaattctttgtttagatttgagccacattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatatttgacattagtccc
ctatcttatttaggataggcaaagatccttttccaatctgttggtggcct
ttttgtcttattgatggtgtcttttgccttacagaagctttgcaatttta
ttcggtcccatttgttgattctagatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttccaggcttttccctac
tttctcctctataagtttcagtgtgtctggttttatgtggagttccttaa
tacacttagatttgaccttagtacaaggagataggaatggatcaatacga
attcttctacatgataaccaccagttgtgccagcaccatttgttgaaaat
actgtctttttcccactggatgattttagctcccttgtcaaaaatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccactgg
tctaattgtctgtcgctataccagtaccatgcagtttttattacaattgc
tctgtagtacaaatttaggtcaggcatggtgattccaccagaggttcttt
tattgttgagaataggttttgctatccaaggttttttgttattccagatg
gatttgcagttttccctttctaattcattgaagaattgagttggaatttt
gatgggaattgcattgaatttgttgtatattgttactgccaatccatgag
catgggagatctttccatcttctgagaatctttaatttctttcttcagag
acttgaagttcttatcatacaaatcattcacttcgtagttagagtcacac
cagatattttatattatttgtgatatgagaaggtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059187_41059737
seq2: B6Ng01-160G16.g_68_619 (reverse)

seq1  AGACCAATGGAATAGAATTGAAGACTCAGAAACGAATCCACACACCTATG  50
      |||||| |||||||||||||||||| |||||| ||| |||||||||||||
seq2  AGACCAGTGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  50

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGAC  100
      |||||||||| || |||||||||||||||| |||||||||| ||||||||
seq2  GTCACTTGATTTTTGACAAGGGAGCTAAAATCATCCAGTGGGAAAAAGAC  100

seq1  AGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAG  150
      || ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGTATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTATCATGTAGAAG  150

seq1  AATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGT  200
      ||| || ||||||||| |||||||||||||||||||||||||||||||||
seq2  AATTCGTATTGATCCATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGT  200

seq1  GGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  250
      | || ||||||| ||||||||||||||| |||||||||||||||||||||
seq2  GTATTAAGGAACTCCACATAAAACCAGACACACTGAAACTTATAGAGGAG  250

seq1  AAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCA  300
      ||||| ||||||||||| |||||||||| ||||||||||||||||||| |
seq2  AAAGTAGGGAAAAGCCTGGAAGATATGGGCACAGGGGAAAAATTCCTGAA  300

seq1  TAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGACC  350
      |||||||||||||||||||||||||||||  |||||  ||||||||||||
seq2  TAGAACAGCAATGGCTTGTGCTGTAAGATCTAGAATCAACAAATGGGACC  350

seq1  TCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACA  400
        || ||| ||||||||||||| ||||||||||||||| |||||||||||
seq2  GAATAAAATTGCAAAGCTTCTGTAAGGCAAAAGACACCATCAATAAGACA  400

seq1  AAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGA  449
      |||||| |||||||||||||| ||||||||||| |||||||||||| |||
seq2  AAAAGGCCACCAACAGATTGGAAAAGGATCTTTGCCTATCCTAAATAAGA  450

seq1  TAGGGGACTAATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCA  499
      |||||||||||| || ||||||||| ||||||||||||||||||| ||||
seq2  TAGGGGACTAATGTCAAATATATATAAAGAACTCAAGAAGGTGGACTCCA  500

seq1  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAA  549
      |||||||||||||||||||||||||||| |||||| | ||||||||||||
seq2  GAAAATCAAATAACCCCATTAAAAAATGTGGCTCAAATCTAAACAAAGAA  550

seq1  TT  551
      ||
seq2  TT  552