BAC Information

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BAC

Clone NameB6Ng01-160H14
Chromosome3 (Build37)
Map Location 120,934,310 - 121,043,126
singlet/doubletdoublet
Overlap geneTmem56, LOC668778, LOC668780, Alg14
Upstream gene2510027J23Rik, LOC435752
Downstream genePpia-ps3_1234.1, Cnn3, Slc44a3, A730020M07Rik, 4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29, Abca4, EG668788, LOC626807, LOC100043724, Gclm, Ppia-ps3_1245.1, Dnttip2, LOC675117
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160H14.bB6Ng01-160H14.g
ACCDH953839DH953840
length1,181902
definitionDH953839|Mus musculus domesticus DNA, BAC clone: B6Ng01-160H14, 5' end.DH953840|Mus musculus domesticus DNA, BAC clone: B6Ng01-160H14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,041,922 - 121,043,126)(120,934,310 - 120,935,210)
sequence
gaattcatgaggccctaggtttggttcccatcatcacagaacaaaaataa
ggaccaaacacagtttaaccacgtttaattattatagtgctacatgaact
ttaatttggatctctggatgaatgtcacagtagcctgaagtctcgtttgg
gaaagttatagcatccagctgtcagaaatagagctggaagtaaactttct
agaaatcgtttatagtcattttgttttgctagaacaagctattacgacca
cactgtactggaaacggcaagactttcagcgctcattaagtaccaattag
tccttcacatttgtccctgagagatacagatgtcacctctgatagtcacg
aaggctgagtgagtattaaggcaggtttgatgcagcccctcatccggtta
gtcacacactccattttcatatttgggggctctaccctgagaacacacat
gccccataatctgaggggtctcttctcaatggccttcctgtggtagaact
ttctagtatattactttagaaccaaggaattgaagacttgtaaagttgga
agctccttaaagatcgaaggttgaattacagacgttctaatctaatgagc
tgttgctacgacttgctcgtatttgttgttagtagagaaaataaacccac
aagaatgttgtcattgttaaaaatattagaattactatacatgtctaaat
atagaactgtcttgattttccatgacagggtaaaaccaagccatatttaa
acccaaccaaaagctattgtttatccacaatttgtcccaagcctccatta
aaaaaaattacctggtactcaaaataaaaatacaatggccagaatctggg
tatttatagtgtcttgccagcaactaaaacaacacccggtatctgctggc
tctaaagacaaggaagccaagagttacttcagagacccttagctgattta
tggtctggtaaggatagactcacttagatttttactgtctcaagtctcca
tgagacgaatgtttagcatgcatttcagtcatgggcctattttattttat
atcactgtctttatttcactttccctcaaattcaaatttacatttcctac
tgactttcgagcttcatttcgatgcatggcctaggttaaacctagcagtt
aatggcctgtatgcaggttgttcttgaaaca
gaattctccatcctgaaagattcacacctcgaagcactgaacgttaaaca
ggacagaatgaaatgcaagagtactgcacatctgggagtgactaacactg
tcatttagaggggccagaggcatggcttggcacagagcacctaccttgca
tgcaggaggctctaggttcagtccccagcaaccaaaaataatcaaatcag
gggccagggtggtgctgcacgcctttaatcccagccatcggaaagcagag
gcagatggatctctggagttaagaccagtctggtctccacagcaagttct
acaccagccagagatattgatgagatgttgtctcaagaaatcaagtaata
atgataatgacagtgacgatggtaataaagttatttagaaaccatagggc
cacagccttcctttcatatgaacaatctctataatcctgggagaataatt
tctctaacacagttggtaaggccacaaccctgcacccttcaagttctatc
agcaggttcttgctctcggcaggaatgacttccatatctacgctctttaa
atggttccttcttatgcccctcactgctagtgagggaacctggggcccac
ttatgccatacaagtgctctacaactgagctacacttctggcccatctct
gtattcccaaagcagtcagaatgggtcgtgacttgaagatgcgttgtcta
agagattcagttatcagtgtggagtcacacgcatcagcacacttgtggtg
catctttgaggagcaaaagcagatacatgctcatgggaccccttcaccac
tattaggaaaacatttccaaatagaaaagttgagagccacgaatcctgca
gtttttacttagttgtctattgttgttgtggggcttgggggttttttgtt
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_121041922_121043126
seq2: B6Ng01-160H14.b_45_1225 (reverse)

seq1  TGTTTCTAAGAACAACCTGACTACAGCCCATTTAAACTGCTAAAGGGTAA  50
      |||||| ||||||||||||  ||||| |||||  |||||||  ||| | |
seq2  TGTTTC-AAGAACAACCTGCATACAGGCCATT--AACTGCT--AGGTTTA  45

seq1  ACTAGAGACCATGGCATCAGAATGAAGCTCTGAAAGTCAGTGAGAATTGT  100
      ||   || |||| |||||  |||||||||| ||||||||||  ||| |||
seq2  AC-CTAGGCCAT-GCATCGAAATGAAGCTC-GAAAGTCAGTAGGAAATGT  92

seq1  AAATTTGGAAATTTTGGAGGGGAAGTGATATAAAGACAGTGATAATAAAA  150
      |||||||  |||||  ||||| |||||| |||||||||||||| ||||||
seq2  AAATTTG--AATTT--GAGGGAAAGTGAAATAAAGACAGTGAT-ATAAAA  137

seq1  TAAAAATAGCCCATGACTGAAAATGCATGCTAAAACATTTCGTCTCATTG  200
      |||||   ||||||||||| ||||||||||| ||||| ||||||||| ||
seq2  TAAAATAGGCCCATGACTG-AAATGCATGCT-AAACA-TTCGTCTCA-TG  183

seq1  GAGACCTGAGAACAGTAAAATATCTAAGTTGGAGTCTTATCCTTACCAGA  250
      ||||| |||| ||||||||| ||||||||  ||||| |||||||||||||
seq2  GAGACTTGAG-ACAGTAAAA-ATCTAAGT--GAGTC-TATCCTTACCAGA  228

seq1  CCAATAAATCAGCTTAGGGTCTCTGAAGTAACTCTTGGCTTCCTTTGTCT  300
      || ||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  CC-ATAAATCAGCTAAGGGTCTCTGAAGTAACTCTTGGCTTCC-TTGTCT  276

seq1  TTAGAGCCAGCAGATACCGGGTGTTGTTTTAGTTGCTGGCAAGACACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGCCAGCAGATACCGGGTGTTGTTTTAGTTGCTGGCAAGACACTAT  326

seq1  AAATACCCAGATTCTGGCCATTGTATTTTTATTTTGAGTACCAGGTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCCAGATTCTGGCCATTGTATTTTTATTTTGAGTACCAGGTAATT  376

seq1  TTTTTTAATGGAGGCTTGGGACAAATTGTGGATAAACAATAGCTTTTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATGGAGGCTTGGGACAAATTGTGGATAAACAATAGCTTTTGGT  426

seq1  TGGGTTTAAATATGGCTTGGTTTTACCCTGTCATGGAAAATCAAGACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTAAATATGGCTTGGTTTTACCCTGTCATGGAAAATCAAGACAGT  476

seq1  TCTATATTTAGACATGTATAGTAATTCTAATATTTTTAACAATGACAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATTTAGACATGTATAGTAATTCTAATATTTTTAACAATGACAACA  526

seq1  TTCTTGTGGGTTTATTTTCTCTACTAACAACAAATACGAGCAAGTCGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGGGTTTATTTTCTCTACTAACAACAAATACGAGCAAGTCGTAG  576

seq1  CAACAGCTCATTAGATTAGAACGTCTGTAATTCAACCTTCGATCTTTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCTCATTAGATTAGAACGTCTGTAATTCAACCTTCGATCTTTAAG  626

seq1  GAGCTTCCAACTTTACAAGTCTTCAATTCCTTGGTTCTAAAGTAATATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTCCAACTTTACAAGTCTTCAATTCCTTGGTTCTAAAGTAATATAC  676

seq1  TAGAAAGTTCTACCACAGGAAGGCCATTGAGAAGAGACCCCTCAGATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGTTCTACCACAGGAAGGCCATTGAGAAGAGACCCCTCAGATTAT  726

seq1  GGGGCATGTGTGTTCTCAGGGTAGAGCCCCCAAATATGAAAATGGAGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATGTGTGTTCTCAGGGTAGAGCCCCCAAATATGAAAATGGAGTGT  776

seq1  GTGACTAACCGGATGAGGGGCTGCATCAAACCTGCCTTAATACTCACTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTAACCGGATGAGGGGCTGCATCAAACCTGCCTTAATACTCACTCA  826

seq1  GCCTTCGTGACTATCAGAGGTGACATCTGTATCTCTCAGGGACAAATGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCGTGACTATCAGAGGTGACATCTGTATCTCTCAGGGACAAATGTG  876

seq1  AAGGACTAATTGGTACTTAATGAGCGCTGAAAGTCTTGCCGTTTCCAGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTAATTGGTACTTAATGAGCGCTGAAAGTCTTGCCGTTTCCAGTA  926

seq1  CAGTGTGGTCGTAATAGCTTGTTCTAGCAAAACAAAATGACTATAAACGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGGTCGTAATAGCTTGTTCTAGCAAAACAAAATGACTATAAACGA  976

seq1  TTTCTAGAAAGTTTACTTCCAGCTCTATTTCTGACAGCTGGATGCTATAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGAAAGTTTACTTCCAGCTCTATTTCTGACAGCTGGATGCTATAA  1026

seq1  CTTTCCCAAACGAGACTTCAGGCTACTGTGACATTCATCCAGAGATCCAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCAAACGAGACTTCAGGCTACTGTGACATTCATCCAGAGATCCAA  1076

seq1  ATTAAAGTTCATGTAGCACTATAATAATTAAACGTGGTTAAACTGTGTTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGTTCATGTAGCACTATAATAATTAAACGTGGTTAAACTGTGTTT  1126

seq1  GGTCCTTATTTTTGTTCTGTGATGATGGGAACCAAACCTAGGGCCTCATG  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTATTTTTGTTCTGTGATGATGGGAACCAAACCTAGGGCCTCATG  1176

seq1  AATTC  1205
      |||||
seq2  AATTC  1181

seq1: chr3_120934310_120935210
seq2: B6Ng01-160H14.g_68_969

seq1  GAATTCTCCATCCTGAAAGATTCACACCTCGAAGCACTGAACGTTAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATCCTGAAAGATTCACACCTCGAAGCACTGAACGTTAAACA  50

seq1  GGACAGAATGAAATGCAAGAGTACTGCACATCTGGGAGTGACTAACACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAATGAAATGCAAGAGTACTGCACATCTGGGAGTGACTAACACTG  100

seq1  TCATTTAGAGGGGCCAGAGGCATGGCTTGGCACAGAGCACCTACCTTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAGAGGGGCCAGAGGCATGGCTTGGCACAGAGCACCTACCTTGCA  150

seq1  TGCAGGAGGCTCTAGGTTCAGTCCCCAGCAACCAAAAATAATCAAATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAGGCTCTAGGTTCAGTCCCCAGCAACCAAAAATAATCAAATCAG  200

seq1  GGGCCAGGGTGGTGCTGCACGCCTTTAATCCCAGCCATCGGAAAGCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGGGTGGTGCTGCACGCCTTTAATCCCAGCCATCGGAAAGCAGAG  250

seq1  GCAGATGGATCTCTGGAGTTAAGACCAGTCTGGTCTCCACAGCAAGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGGATCTCTGGAGTTAAGACCAGTCTGGTCTCCACAGCAAGTTCT  300

seq1  ACACCAGCCAGAGATATTGATGAGATGTTGTCTCAAGAAATCAAGTAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGCCAGAGATATTGATGAGATGTTGTCTCAAGAAATCAAGTAATA  350

seq1  ATGATAATGACAGTGACGATGGTAATAAAGTTATTTAGAAACCATAGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATGACAGTGACGATGGTAATAAAGTTATTTAGAAACCATAGGGC  400

seq1  CACAGCCTTCCTTTCATATGAACAATCTCTATAATCCTGGGAGAATAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTTCCTTTCATATGAACAATCTCTATAATCCTGGGAGAATAATT  450

seq1  TCTCTAACACAGTTGGTAAGGCCACAACCCTGCACCCTTCAAGTTCTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAACACAGTTGGTAAGGCCACAACCCTGCACCCTTCAAGTTCTATC  500

seq1  AGCAGGTTCTTGCTCTCGGCAGGAATGACTTCCATATCTACGCTCTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTTCTTGCTCTCGGCAGGAATGACTTCCATATCTACGCTCTTTAA  550

seq1  ATGGTTCCTTCTTATGCCCCTCACTGCTAGTGAGGGAACCTGGGGCCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCCTTCTTATGCCCCTCACTGCTAGTGAGGGAACCTGGGGCCCAC  600

seq1  TTATGCCATACAAGTGCTCTACAACTGAGCTACACTTCTGGCCCATCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCCATACAAGTGCTCTACAACTGAGCTACACTTCTGGCCCATCTCT  650

seq1  GTATTCCCAAAGCAGTCAGAATGGGTCGTGACTTGAAGATGCGTTGTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCCAAAGCAGTCAGAATGGGTCGTGACTTGAAGATGCGTTGTCTA  700

seq1  AGAGATTCAGTTATCAGTGTGGAGTCACACGCATCAGCACACTTGTGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTCAGTTATCAGTGTGGAGTCACACGCATCAGCACACTTGTGGTG  750

seq1  CATCTTTGAGGAGCAAAAGCAGATACATGCTCATGGGACCCCTTCACCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTGAGGAGCAAAAGCAGATACATGCTCATGGGACCCCTTCACCAC  800

seq1  TATTAGGAAAACACTTCCAAATAGAAAAGTTGAGAGCCACGAAT-CTGCA  849
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  TATTAGGAAAACATTTCCAAATAGAAAAGTTGAGAGCCACGAATCCTGCA  850

seq1  GTTTTTACTTAGTTGTCTAGTGTTGTTGTGGGGCTTGGGGGTTTTTTGTT  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTTTTTACTTAGTTGTCTATTGTTGTTGTGGGGCTTGGGGGTTTTTTGTT  900

seq1  GT  901
      ||
seq2  GT  902