MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-161O23
Chromosome	3 (Build37)
Map Location	22,186,259 - 22,187,241
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040325, 7530428D23Rik, LOC100039465, LOC100040353, Tbl1xr1, LOC545506
Downstream gene	LOC675593, LOC100040378, LOC623751
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040325 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	7530428D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319506 MGI:2442162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100039465 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040353 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs

name	Tbl1xr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81004 MGI:2441730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545506 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 145 ESTs, 14 Proteins pseudo : _no_value

name	LOC675593 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins pseudo : _no_value

name	LOC100040378 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC623751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100040325 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250842 GeneID:100040325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040325 transcript_id : XM_001474503.1

name	7530428D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369445 GeneID:319506 MGI:2442162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 7530428D23 gene transcript_id : XM_887943.2

name	LOC100039465 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250813 GeneID:100039465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039465 transcript_id : XM_001472980.1

name	LOC100040353 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250844 GeneID:100040353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs product : similar to splicing coactivator subunit SRm300 transcript_id : XM_001474539.1

name	Tbl1xr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:130978338 GeneID:81004 MGI:2441730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transducin (beta)-like 1X-linked receptor 1 transcript_id : NM_030732.3

name	LOC100040378 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250846 GeneID:100040378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040378 transcript_id : XM_001474577.1

name	LOC100040325 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250843 GeneID:100040325
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474553.1

name	7530428D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369446 GeneID:319506 MGI:2442162
definition	codon_start : 1 product : hypothetical protein LOC319506 protein_id : XP_893036.2

name	LOC100039465 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250814 GeneID:100039465
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473030.1

name	LOC100040353 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250845 GeneID:100040353
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474589.1

name	Tbl1xr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543001 CCDS:CCDS17266.1 GeneID:81004 MGI:2441730
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : nuclear receptor corepressor/HDAC3 complex subunit TBLR1; F-box-like/WD repeat protein TBL1XR1; TBL1-related protein 1 product : IRA1 protein protein_id : NP_109657.2

name	LOC100040378 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250847 GeneID:100040378
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474627.1

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 1 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 2 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 3 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 4 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 5 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 6 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 7 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 8 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 9 pseudo : _no_value

name	LOC545506 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250815 GeneID:545506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 145 ESTs, 14 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_031007.1

name	LOC675593 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250816 GeneID:675593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins product : similar to spindlin pseudo : _no_value transcript_id : XR_031023.1

clone name	MSMg01-291F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487J22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-056O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072K19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-165D09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-502O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-161O23.b	B6Ng01-161O23.g
ACC	DH954911	DH954912
length	1,155	974
definition	DH954911\|Mus musculus domesticus DNA, BAC clone: B6Ng01-161O23, 5' end.	DH954912\|Mus musculus domesticus DNA, BAC clone: B6Ng01-161O23, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggcctatacctaaacatgataaaagcaatctacagcaaacca gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa atcagggactagacaaggttgcccactttctccctaccttttcaacatag tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg atacaaattggaaaagaggaagtcaaaatatcactttttgcaaatgatat gatagtatatataagtgaccataaaaattctaccagagaactcctaaacc tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggca tgactctaactaaggaggtgaaagatctgtatgataaaaacttcaaatct ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg ctcatggattggcaggatcaacattttaaaaatggctatcatgccaaaag caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc aacaaattagaaggagcaatttgcaaattcatctggaataacaaaaaccc taggattgcaaaaagtcttctcaaggataaaagaacttctggtggaatca ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca tggtactggtatagagacagacaagtagaccaatggaatagaattgagac ccagaaatgaacccacacacctatggtcacttgatcttcgacaagggagc aaaatcatcagtgtagaaagacagcattttcacatgtgctggcacactgg tgtatcatgtagagatgcaatcgatcatacttatctctgtactagtcaaa tctagtgatcagactcaaataaacagagacactgaactatagaggagaag tgggcaagctgagaattggcacagcaaatctgacagaacgcaatgccttg gcgtagatcgaatggacaatggactatgatctcagttctgccaggcaaga tctgt	gaattctcttaaggagaaaagtgagaatgcaaactcacatatttaaaaag attgtcttttcttcagtaatgtagtttctaggttttaaaaattattatta tttcatgtgcactggtgttttacattcatgtatgtgtgtgctctgtatgc atatctggcacctacagaagtcagaaggcattgaattcccttgacctgga gttaagatggctatgaccctctaaatggtactgggatttgaacctcactc ttctgtaagagcaaccagtacttttaaccactgagccatcttggtcatgg tgtcttttttaaaacaatggaaatcttgactaagacaggaggttctctgg ggcttgctggttagctagtctagacaaatcagtaaactccagattcagta agtgtactggctggttttgtgtgtcaacttgacacaggctgaagttatta caaagaaaggagcttcagttggggaaatgcctccatgagatccagctgta aggcattttgtcaattagtgatcaaggtgagggggggcattgtgggtggt gccatccctgagctggtagtcttgggttatatgagaaagcaagctgagca atccaggggaagcaagccagtaagtaacatccctccatggcctctgcatc aactgctgctttctgacctgcttaatttccagtcctgacttcttttggtg ataaacagcaatgtggaagtgtaagctgaggttaccctttcctcccaact tgcttcttggtcatgatgtttatgcaggaatagagacccagacttagaca gttaagagaccctgttttatatgtaggtagatgggaatagaggaattcaa gtactgctttctacatggagatactcattgtaagtgggatggccctctgg atcagtacaggacttacccagaccacaagtctcagcataaaggagattta tgatcctggaaaggcaatagggaa
quality values	Open. Hide. 61 25 38 36 61 38 31 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 39 38 43 49 30 39 32 27 33 35 37 43 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 59 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 37 50 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 57 57 53 57 57 53 57 57 57 57 57 57 57 57 57 42 57 57 57 57 57 57 57 57 57 57 52 57 57 57 53 57 57 45 47 57 53 57 57 57 57 57 45 57 45 57 57 57 52 50 57 57 50 57 28 57 57 53 57 57 53 52 53 57 53 53 47 41 28 53 57 57 53 53 47 47 57 57 41 39 57 57 52 50 50 36 57 38 34 53 50 57 53 52 52 57 57 52 43 57 57 57 50 38 57 57 50 57 52 57 52 39 53 57 32 47 21 53 57 53 43 53 50 52 50 53 52 52 53 44 53 52 38 53 50 35 52 53 57 37 53 47 53 39 23 15 19 23 53 42 30 57 57 42 40 53 31 38 21 53 53 53 40 31 40 53 53 44 40 42 48 27 52 52 23 46 53 48 42 43 37 53 53 22 57 41 30 48 27 53 37 57 41 37 31 30 53 44 37 28 32 25 40 35 48 44 44 32 40 37 34 36 41 24 53 57 36 40 32 37 37 33 33 11 45 26 20 45 39 28 25 46 51 46 41 30 35 34 32 30 30 28 29 22 31 15 46 32 32 24 51 51 47 32 47 30 29 28 30 29 29 30 47 26 32 27 26 29 37 29 28 29 37 21 29 30 23 37 27 39 41 20 31 29 28 51 39 31 35 33 51 29 24 35 34 30 30 16 28 43 23 29 23 30 30 30 36 32 35 34 28 39 51 51 51 29 27 26 29 21 23 26 20 30 20 28 25 25 23 41 26 34 29 21 26 40 24 24 26 14 31 31 18 21 28 29 28 27 29 30 17 36 14 23 21 31 36 19 31 28 26 23 32 28 17 28 16 26 9 23 17 36 30 14 23 41 51 33 29 29 25 27 39 30 30 17 21 16 35 24 34 28 28 26 25 19 30 20 28 21 21 17 19 26 19 31 28 14 33 33 19 31 20 13 16 25 51 13 32 20 22 38 38 13 12 5 7 12 16 32 7 12 19 10 4 6 7 18 44 14 17 26 11 7 22 26 28 28 44 44 27 30 34 18 14 8 9 4 19 26 17 22 19 16 17 11 26 14 27 12 17 8 10 29 6 20 29 26 22 29 18 15 9 29 7 34 19 29 9 21 11 31 29 23 22 17 31 9 25 26 14 23 8 13 14 20 8 26 19 14 18 18 28 14 7 4 4 19 10 30 9 9 13 5 10 4 9 20 6 16 8 12 4 4 6 22 7 5 4 6 7 5 18 23 4 2 3 7 4 8 4 3 13 23 6 18 10 14 23 5 11 6 5 6 5 12 5 2 7 11 2 2 4 12 4 1 4 17 7 10 9 6 16 3 6 19 12 6 8 15 5 3 5 5 3 1 4 8 13 12 11 6 7 13 3 3 4 16 8 4 10 19 12 9 10 20 4 6 16 16 8 3 6 7 5 7 6 20 10 6 8 17 15 18 5 5 4 3 10 15 8 20 17 5 8 6 18 10 3 4 1 1 8 4 14 3 4 1 3 2 2 3 10 12 3 3 1 4 2 1 3 3 12 4 4 7	Open. Hide. 61 47 35 20 26 26 19 22 27 52 28 25 28 52 55 52 61 61 61 61 61 49 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 37 37 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 59 61 59 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 43 61 61 61 61 61 61 61 61 61 50 47 61 53 53 50 53 61 61 61 61 61 61 61 61 53 47 57 53 47 53 53 47 39 53 53 53 45 53 53 53 47 37 43 53 53 53 57 50 53 47 53 38 53 52 57 57 57 57 53 53 45 57 53 47 52 53 57 57 52 53 53 40 53 52 57 50 57 57 50 57 57 57 57 57 57 50 38 52 53 53 50 57 57 57 50 57 52 40 53 34 47 42 50 50 38 35 43 52 40 25 53 50 52 41 40 52 35 50 50 52 52 50 57 38 43 46 50 42 42 52 53 57 35 57 57 57 30 43 37 47 50 50 53 52 57 31 47 34 52 45 38 53 30 42 53 57 47 41 35 24 50 40 53 37 33 34 28 42 37 28 52 38 38 20 52 42 38 48 40 39 38 52 32 52 23 37 50 57 25 53 47 33 37 53 36 31 37 37 33 30 52 35 57 34 33 52 33 37 57 29 34 33 32 26 12 52 29 40 35 40 16 18 53 37 57 44 27 33 32 37 35 37 43 38 37 37 30 53 35 34 17 57 57 41 47 53 29 33 40 29 27 57 53 36 40 37 48 37 16 30 40 31 35 25 20 53 28 41 41 29 33 31 25 30 30 30 46 34 39 32 27 27 29 45 38 30 51 31 18 29 32 39 45 27 12 29 27 29 30 30 30 36 29 25 14 46 47 46 21 28 31 36 34 25 13 48 29 51 28 29 35 34 41 29 28 29 33 39 31 31 11 16 12 21 18 33 32 22 28 29 18 33 31 25 21 29 28 21 25 14 51 23 32 20 45 15 29 17 37 25 15 19 28 51 51 29 36 17 19 20 28 12 16 8 18 10 7 14 28 13 29 46 32 33 28 24 12 10 31 14 30 34 28 30 28 23 28 22 31 26 43 12 27 35 23 29 41 25 18 21 11 16 14 10 31 6 33 9 22 15 22 23 6 15 11 36 9 8 11 20 18 23 9 39 46 28 13 11 21 36 25 29 23 10 10 17 21 14 46 28 28 18 14 17 20 23 7 12 29 11 7 7 7 14 25 25 29 14 10 20 20 16 14 14 15 32 8 14 7 10 13 27 10 12 9 10 17 24 18 26 7 17 6 19 7 38 18 5 17 25 29 19 13 22 14 20 19 22 32 12 15 24 6 15 8 5 11 7 28 17 8 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_22186259_22187241
seq2: B6Ng01-161O23.g_68_1041

seq1  GAATTCTCTTAAGGAGAAAAGTGAGAATGCAAACTCACATATTTAAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAAGGAGAAAAGTGAGAATGCAAACTCACATATTTAAAAAG  50

seq1  ATTGTCTTTTCTTCAGTAATGTAGTTTCTAGGTTTTAAAAATTATTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTTTTCTTCAGTAATGTAGTTTCTAGGTTTTAAAAATTATTATTA  100

seq1  TTTCATGTGCACTGGTGTTTTACATTCATGTATGTGTGTGCTCTGTATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTGCACTGGTGTTTTACATTCATGTATGTGTGTGCTCTGTATGC  150

seq1  ATATCTGGCACCTACAGAAGTCAGAAGGCATTGAATTCCCTTGACCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGGCACCTACAGAAGTCAGAAGGCATTGAATTCCCTTGACCTGGA  200

seq1  GTTAAGATGGCTATGACCCTCTAAATGGTACTGGGATTTGAACCTCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGATGGCTATGACCCTCTAAATGGTACTGGGATTTGAACCTCACTC  250

seq1  TTCTGTAAGAGCAACCAGTACTTTTAACCACTGAGCCATCTTGGTCATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAAGAGCAACCAGTACTTTTAACCACTGAGCCATCTTGGTCATGG  300

seq1  TGTCTTTTTTAAAACAATGGAAATCTTGACTAAGACAGGAGGTTCTCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTTTAAAACAATGGAAATCTTGACTAAGACAGGAGGTTCTCTGG  350

seq1  GGCTTGCTGGTTAGCTAGTCTAGACAAATCAGTAAACTCCAGATTCAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCTGGTTAGCTAGTCTAGACAAATCAGTAAACTCCAGATTCAGTA  400

seq1  AGTGTACTGGCTGGTTTTGTGTGTCAACTTGACACAGGCTGAAGTTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACTGGCTGGTTTTGTGTGTCAACTTGACACAGGCTGAAGTTATTA  450

seq1  CAAAGAAAGGAGCTTCAGTTGGGGAAATGCCTCCATGAGATCCAGCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAGGAGCTTCAGTTGGGGAAATGCCTCCATGAGATCCAGCTGTA  500

seq1  AGGCATTTTGTCAATTAGTGATCAAGGTGAGGGGGGGCATTGTGGGTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTTGTCAATTAGTGATCAAGGTGAGGGGGGGCATTGTGGGTGGT  550

seq1  GCCATCCCTGAGCTGGTAGTCTTGGGTTATATGAGAAAGCAAGCTGAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCCTGAGCTGGTAGTCTTGGGTTATATGAGAAAGCAAGCTGAGCA  600

seq1  ATCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCATGGCCTCTGCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCATGGCCTCTGCATC  650

seq1  AACTGCTGCTTTCTGACCTGCTTAATTTCCAGTCCTGACTTCTTTTGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTGCTTTCTGACCTGCTTAATTTCCAGTCCTGACTTCTTTTGGTG  700

seq1  ATAAACAGCAATGTGGAAGTGTAAGCTGAGGTTACCCTTTCCTCCCCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATAAACAGCAATGTGGAAGTGTAAGCTGAGGTTACCCTTTCCT-CCCAAC  749

seq1  TTGCTTCTTGGTCATGATGTTTATGCAGGAATAGAGACCCAGACTTAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCTTGGTCATGATGTTTATGCAGGAATAGAGACCCAGACTTAGAC  799

seq1  AGTTAAGAGACCCTGTTTTAATATGTAAGGTAGATGGGAATAGAGGAATT  850
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  AGTTAAGAGACCCTGTTTT-ATATGT-AGGTAGATGGGAATAGAGGAATT  847

seq1  CAAGTAACTGCTTTCTACATGGAAGATACACATTGTAAGGTGGGATGGCC  900
      ||||| |||||||||||||||| |||||| |||||||| |||||||||||
seq2  CAAGT-ACTGCTTTCTACATGG-AGATACTCATTGTAA-GTGGGATGGCC  894

seq1  CTCTGGAATCAGTACAGGACATACCCAGACCACAAGTTCTCAGCATAAAG  950
      |||||| ||||||||||||| ||||||||||||||| |||||||||||||
seq2  CTCTGG-ATCAGTACAGGACTTACCCAGACCACAAG-TCTCAGCATAAAG  942

seq1  GAGATTTATGATCCTGGAAGGGCAAGTAGGGAA  983
      ||||||||||||||||||| ||||| |||||||
seq2  GAGATTTATGATCCTGGAAAGGCAA-TAGGGAA  974

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information