BAC Information

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BAC

Clone NameB6Ng01-162C13
Chromosome3 (Build37)
Map Location 16,334,245 - 16,334,976
singlet/doubletsinglet
Overlap geneLOC100040034
Upstream geneSirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3
Downstream geneLOC100040059, EG383936, LOC622737
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162C13.bB6Ng01-162C13.g
ACCDH955068DH955069
length9861,056
definitionDH955068|Mus musculus domesticus DNA, BAC clone: B6Ng01-162C13, 5' end.DH955069|Mus musculus domesticus DNA, BAC clone: B6Ng01-162C13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttatggagccaggggtatattcttcccatggtcttgctcttt
ttgtagagaactgttacttctatgatcacttcccttttttcttgtaaaga
actataattgttttccttacttcttgcagagtacttttattagtctggtg
gcatcaaggtcttctgttagagaaatcttctgtatctgaaggtcgattca
tgaatgaaggtggcttttttaacaggatatggggggttccgggactccac
caaaagtagtctgcacaagtgagagtgtgcactacagaagctaacagctt
ctaggacaggcgggagccacagagcttctgaggcagtgcccttttcgggc
tccagacatccagccacctttccagccagaggataggtgtctgcgcagcc
ctagagggctttgcctcagcatcagcggaaaacatcttggttccgagact
ccgctgaaagtagtctgcacaggtgagagtgtggactacagaagctaaca
gctcctgggacaggccaaagcaacacaacttctgggaaaggtcctttttt
gggccttaatcattggccaggagggaggttcgaacgccagatatctgtgc
accttccctgtaagaggaaagattgcctgcagagtgctctgaccactgaa
actcagaggagagagctagtctcccaggtctgctgacagagggtaacaga
atcaccagaggaacaatctctaaacagagacaactataacaactaactcc
agagattaccagatggcgaaaggtaaacttaagaatcttactaacagaaa
ccaagacccctcaccatcatcagaacgcagcactcccaccttgcccggta
ctgggaaccacaatacacctgaaaagctagacccggatttaaagcatatc
tcatgatgatggtagaggaccactgaaactcagaggagagagttagtctc
ccaggtcaagaaagactttaataactcacttaaaga
gaattctttcttttttccattgtgtaggtttaattgtttttttgtttttt
ttttatcaaaagtcaggtgcttataggtatgtagatttacatctgggtct
ttcagtcctatcagtttttattccagtagcatctggttttattattattg
ctcttgaaatcagaggtttagtgatatctccagacactcttttattgtac
aggatcattttagctatcctgagatttttgtttttccatattaaattgaa
tattgtccttaaagatttgtattgaactgtgtggaaaatttaatggggat
tgtattgaatttgtagattgcatttggtgacatggccatgtttactatgt
taatcctactgatccatgagcatgggacatctttacatctactgatatct
tcttcaatttctatcttcaaagacttgaagattttctcactgatttttca
cttgattagagatagcttaagataatttacattgtttatagatattgtga
aaggtgttattttcctgattgctttctcatttttagctcatttgtcattt
gtacatataagggtaattgcttttagttaatcttgtatccaaacatttct
ctgaagatgtttattagctgtagaagttcctggaagaattttgggtgtta
tttatatacactctgcaattacctgtaaacaacaaaacttattcttttcc
actttgtatctacttaatctcttttaatttttttgtggctctagctataa
atttgaagaataaattgcatagatattgtattttaatgttcttaacttga
gtggaattcctttgatattctctttatttattggctacaggcttggtgta
attgcctttaatatgtctaattatagtctttgtatctctgatcactccaa
gacttttataaggaagtattggggtttatcaaagtgtttctcagtaactt
atgtgatgatgtggtttgtttgttgtttgttttagtttgggtttgtttta
gctggtttaacggaagaatacaggatgggtatatttctcaaattctataa
agattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16334245_16334976
seq2: B6Ng01-162C13.b_47_778

seq1  GAATTCTCTTATGGAGCCAGGGGTATATTCTTCCCATGGTCTTGCTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTATGGAGCCAGGGGTATATTCTTCCCATGGTCTTGCTCTTT  50

seq1  TTGTAGAGAACTGTTACTTCTATGATCACTTCCCTTTTTTCTTGTAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAGAACTGTTACTTCTATGATCACTTCCCTTTTTTCTTGTAAAGA  100

seq1  ACTATAATTGTTTTCCTTACTTCTTGCAGAGTACTTTTATTAGTCTGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAATTGTTTTCCTTACTTCTTGCAGAGTACTTTTATTAGTCTGGTG  150

seq1  GCATCAAGGTCTTCTGTTAGAGAAATCTTCTGTATCTGAAGGTCGATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAAGGTCTTCTGTTAGAGAAATCTTCTGTATCTGAAGGTCGATTCA  200

seq1  TGAATGAAGGTGGCTTTTTTAACAGGATATGGGGGGTTCCGGGACTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAAGGTGGCTTTTTTAACAGGATATGGGGGGTTCCGGGACTCCAC  250

seq1  CAAAAGTAGTCTGCACAAGTGAGAGTGTGCACTACAGAAGCTAACAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTAGTCTGCACAAGTGAGAGTGTGCACTACAGAAGCTAACAGCTT  300

seq1  CTAGGACAGGCGGGAGCCACAGAGCTTCTGAGGCAGTGCCCTTTTCGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGACAGGCGGGAGCCACAGAGCTTCTGAGGCAGTGCCCTTTTCGGGC  350

seq1  TCCAGACATCCAGCCACCTTTCCAGCCAGAGGATAGGTGTCTGCGCAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACATCCAGCCACCTTTCCAGCCAGAGGATAGGTGTCTGCGCAGCC  400

seq1  CTAGAGGGCTTTGCCTCAGCATCAGCGGAAAACATCTTGGTTCCGAGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGGGCTTTGCCTCAGCATCAGCGGAAAACATCTTGGTTCCGAGACT  450

seq1  CCGCTGAAAGTAGTCTGCACAGGTGAGAGTGTGGACTACAGAAGCTAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGAAAGTAGTCTGCACAGGTGAGAGTGTGGACTACAGAAGCTAACA  500

seq1  GCTCCTGGGACAGGCCAAAGCAACACAACTTCTGGGAAAGGTCCTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGGGACAGGCCAAAGCAACACAACTTCTGGGAAAGGTCCTTTTTT  550

seq1  GGGCCTTAATCATTGGCCAGGAGGGAGGTTCGAACGCCAGATATCTGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTAATCATTGGCCAGGAGGGAGGTTCGAACGCCAGATATCTGTGC  600

seq1  ACCTTCCCTGTAAGAGGAAAGATTGCCTGCAGAGTGCTCTGACCACTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCCTGTAAGAGGAAAGATTGCCTGCAGAGTGCTCTGACCACTGAA  650

seq1  ACTCAGAGGAGAGAGCTAGTCTCCCAGGTCTGCTGACAGAGGGTAACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAGGAGAGAGCTAGTCTCCCAGGTCTGCTGACAGAGGGTAACAGA  700

seq1  ATCACCAGAGGAACAATCTCTAAACAGAGACA  732
      ||||||||||||||||||||||||||||||||
seq2  ATCACCAGAGGAACAATCTCTAAACAGAGACA  732