BAC Information

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BAC

Clone NameB6Ng01-162F04
Chromosome3 (Build37)
Map Location 67,287,302 - 67,288,432
singlet/doubletsinglet
Overlap geneRarres1
Upstream geneLOC625115, Shox2, Rsrc1, Mlf1, Gfm1, Lxn
Downstream geneMfsd1, LOC667207, Gm412, EG208426, EG545531, LOC631379
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162F04.bB6Ng01-162F04.g
ACCDH955191DH955192
length4941,127
definitionDH955191|Mus musculus domesticus DNA, BAC clone: B6Ng01-162F04, 5' end.DH955192|Mus musculus domesticus DNA, BAC clone: B6Ng01-162F04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgggctcaaaattttgatatgagtgggtggccccatcacccaaacagggg
ccttgcctatcctctagatatggtatctacaggttgtccctcccctttgt
ggggtacttcatagcagccttatttataatagccagaagctggaaagaac
ccagatgtccttcaacagaggaatggatacagaaaatgtggtacatttaa
aacaatgacttcatgaaattcacagacaaatggatggaactagaaaatat
cactctgagtgaggtaacccagttacaaaagaacacacgtgctatgtact
cactgataagtggatattatcccaaaatcttggaattcccatgatacaat
tcaccaactatatgaagctcaagaagaaggaagaccaaagtgtgaatgct
tcagtctttcttagaagggggaataaaatactcacaggaggtagaggatg
ggaggaacttgggaggaagagaggagagaaagggggaaagggtg

gaattcaggtaataattctcatccagaaagtttggggagtgggggagtga
tagccaccccgcctcacactcacttcctgcccctgagctgtcttgccttt
atcagctccatcgccttgttagagagagtggggagacttaacaaaagtcc
ttgccttattacatagtaataatcaattagagggtaattgctgtttaaaa
gcactctctaaaaagatcagtaaaaaaggaaaaaaaaaaacccttaagtt
ctatttgatgcctgttttacaatggtctttggagagcagacaaaattatt
attagcgtaaaaaatgccaaatgtttggcaagttcctcagaaaatactgt
tgatccctcatgggtaaatagtgaagatgtttcctgttagtaagtacttc
tgacagctgatttggcttttactctggaaaaagccctctcttccaatatc
acatacctgagaaaattcccagccctggctaaaggcaactgtttgcctac
tttgccctgctaacaagcccttgcgcagatcctcacattaaccacagacc
cccacattaaccagcagagtccacctcacattccccacattcctcccatc
ctcacccttgactcgggcctctgttctctgagaggacatgatgggtatcc
gggaactgagactggctggtgtctgccttccctccaggtggactctgtgc
tgccaggtccgaggtaggaagagtaccagactaaaccttatgtaactcta
tgtagaccaccacttctggtctctcccagtcagtgggtttaaacaccatc
atcacagcatgactacagccatccatgcctgtctcttaaacacaaacctc
tatggtaagatgacagattgtcttcttgccacaaatcaggacagcttccc
taaacctgttttgacgtctttttctatcatgactagaaactctgcttcag
gttaggcctaagactcatctttacctcttaccattttctgatgtcccaaa
caacctataacccagattccagtctactggaatcctccattctctattgc
ttgccccctagtcaggccaccaagcaagccttctgccttcctcccttgtt
tcatggtagtcgtttctccagagtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67287302_67288432
seq2: B6Ng01-162F04.g_68_1194

seq1  GAATTCAGGTAATAATTCTCATCCAGAAAGTTTGGGGAGTGGGGGAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTAATAATTCTCATCCAGAAAGTTTGGGGAGTGGGGGAGTGA  50

seq1  TAGCCACCCCGCCTCACACTCACTTCCTGCCCCTGAGCTGTCTTGCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACCCCGCCTCACACTCACTTCCTGCCCCTGAGCTGTCTTGCCTTT  100

seq1  ATCAGCTCCATCGCCTTGTTAGAGAGAGTGGGGAGACTTAACAAAAGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTCCATCGCCTTGTTAGAGAGAGTGGGGAGACTTAACAAAAGTCC  150

seq1  TTGCCTTATTACATAGTAATAATCAATTAGAGGGTAATTGCTGTTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTATTACATAGTAATAATCAATTAGAGGGTAATTGCTGTTTAAAA  200

seq1  GCACTCTCTAAAAAGATCAGTAAAAAAGGAAAAAAAAAAACCCTTAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTCTAAAAAGATCAGTAAAAAAGGAAAAAAAAAAACCCTTAAGTT  250

seq1  CTATTTGATGCCTGTTTTACAATGGTCTTTGGAGAGCAGACAAAATTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGATGCCTGTTTTACAATGGTCTTTGGAGAGCAGACAAAATTATT  300

seq1  ATTAGCGTAAAAAATGCCAAATGTTTGGCAAGTTCCTCAGAAAATACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCGTAAAAAATGCCAAATGTTTGGCAAGTTCCTCAGAAAATACTGT  350

seq1  TGATCCCTCATGGGTAAATAGTGAAGATGTTTCCTGTTAGTAAGTACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCTCATGGGTAAATAGTGAAGATGTTTCCTGTTAGTAAGTACTTC  400

seq1  TGACAGCTGATTTGGCTTTTACTCTGGAAAAAGCCCTCTCTTCCAATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCTGATTTGGCTTTTACTCTGGAAAAAGCCCTCTCTTCCAATATC  450

seq1  ACATACCTGAGAAAATTCCCAGCCCTGGCTAAAGGCAACTGTTTGCCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCTGAGAAAATTCCCAGCCCTGGCTAAAGGCAACTGTTTGCCTAC  500

seq1  TTTGCCCTGCTAACAAGCCCTTGCGCAGATCCTCACATTAACCACAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCTGCTAACAAGCCCTTGCGCAGATCCTCACATTAACCACAGACC  550

seq1  CCCACATTAACCAGCAGAGTCCACCTCACATTCCCCACATTCCTCCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATTAACCAGCAGAGTCCACCTCACATTCCCCACATTCCTCCCATC  600

seq1  CTCACCCTTGACTCGGGCCTCTGTTCTCTGAGAGGACATGATGGGTACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTCACCCTTGACTCGGGCCTCTGTTCTCTGAGAGGACATGATGGGTATCC  650

seq1  GGGAACTGAGACTGGCTGGTGTCTGCCTTCCCTCCAGGTGGACTCTGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTGAGACTGGCTGGTGTCTGCCTTCCCTCCAGGTGGACTCTGTGC  700

seq1  TGCCAGGTCCGAGGTAGGAAGAGTACCAGACTAAACCTTATGTAACTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGTCCGAGGTAGGAAGAGTACCAGACTAAACCTTATGTAACTCTA  750

seq1  TGTAGACCACCACTTCTGGTCTCTCCCAGTCAGTGGTTTTAAACACCATC  800
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTAGACCACCACTTCTGGTCTCTCCCAGTCAGTGGGTTTAAACACCATC  800

seq1  ATCACAGCATGACTACAGCCATCCATGCCTGTCTCTTAAACACAAACCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGCATGACTACAGCCATCCATGCCTGTCTCTTAAACACAAACCTC  850

seq1  TATGGTAAGATGACAGATTGTCTTCTTGCCACAAATCAGGACAGCTTCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTAAGATGACAGATTGTCTTCTTGCCACAAATCAGGACAGCTTCCC  900

seq1  TAAACCTGTTCTTGACGTCTTTTCTAATCAATGACTAGAAACTCTGCTTC  950
      |||||||||| ||||||||||||   ||| ||||||||||||||||||| 
seq2  TAAACCTGTT-TTGACGTCTTTTTCTATC-ATGACTAGAAACTCTGCTT-  947

seq1  CAGGTTCAGGCCTAAGACTCATCTTTTACCTCTTACCATTTTCTGATGTT  1000
      |||||| |||||||||||||||| |||||||||||||||||||||||| |
seq2  CAGGTT-AGGCCTAAGACTCATC-TTTACCTCTTACCATTTTCTGATG-T  994

seq1  CCCAAACAACCTATAACCAAGATTGCCAGTCTACCTGAATCCTCCA-TCT  1049
      |||||||||||||||||| ||||| |||||||||  |||||||||| |||
seq2  CCCAAACAACCTATAACCCAGATT-CCAGTCTACTGGAATCCTCCATTCT  1043

seq1  CTATTGC-TGCCCCCTAGTCCAAGCCACC-AGCAAGCCTTCCTGCTTCCT  1097
      ||||||| ||||||||||| || |||||| |||||||||||   ||||||
seq2  CTATTGCTTGCCCCCTAGT-CAGGCCACCAAGCAAGCCTTCTGCCTTCCT  1092

seq1  CCCTTGTTTCATGGTAGTCTGTTCT-CAGAGTGGA  1131
      |||||||||||||||||||  |||| |||||||||
seq2  CCCTTGTTTCATGGTAGTCGTTTCTCCAGAGTGGA  1127


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