BAC Information

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BAC

Clone NameB6Ng01-164A02
Chromosome3 (Build37)
Map Location 97,541,525 - 97,735,196
singlet/doubletdoublet
Overlap genePde4dip, Sec22b, EG433632
Upstream geneZfp364, Cd160, Pdzk1, Gpr89, Gja8, 9230114J08Rik, Gja5, Acp6, Bcl9, Olfr1402, Chd1l, Fmo5, Prkab2
Downstream geneLOC100042975, Notch2, Adam30, LOC622561, Reg4, Hmgcs2, Phgdh, Zfp697, LOC100043461, Hsd3b4, LOC100043456, EG545555, LOC676433, Hsd3b5, LOC668543, Hsd3b2, Hsd3b3, Hsd3b6, LOC545556, Hsd3b1, Hao3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164A02.bB6Ng01-164A02.g
ACCDH956447DH956448
length488679
definitionDH956447|Mus musculus domesticus DNA, BAC clone: B6Ng01-164A02, 5' end.DH956448|Mus musculus domesticus DNA, BAC clone: B6Ng01-164A02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,734,703 - 97,735,196)(97,541,525 - 97,542,203)
sequence
tggggaagctactattgatatatagatctcatagtgctatgggagggcta
gacttcccttgaagatatgaagtaaaacggctggtacagtacaggatctc
tagcagcaacactgcaggagcttataagggaagagaaacttgcaaaggat
gcggatgagccatggctaaggtggaaaacaacaaaaacaaagcaaagcaa
agcaaagcagtgcatggaaatcaaaggaaaacagtgagtgcgtcaaggca
gatgtggtcatcagcatccaacgctgcccagaggaaagataaaggctgat
gtgttcgctggatttcaccatccaggtaaggtggtgtcctcaccattcct
agggaaagcgctctgaatctgctgtgaggcaatgccattacagaagacaa
gcgccattagaaacagcgaaaaaacacagctcattagctcatccgactcc
ctttcacactaaccccaactggggtggagggggtgtgg
gaattctcaccggaggtttctgagtgggtgggtctagtttctgagtgggt
aggtctagtttctgagtgggtaggtctagtttctgagtgggtgggtctag
tgttcagaaccacggcattcaaaagagtgtctgagcaacgggatcagagc
tttgcagtgacagctggagttaacaaacttggcttcgtagtcaggtgctc
aggcagccaatcaaatgttacttctgagaaggaagcaggtgtcagcgcag
tgtgacccgaagcttctcttcctgaccatgagactccagatctagtgtgc
agactagaagctagagagctgaattttctcaaactattttctatgctctg
atctcagctctcactacctagatactgaactaggagcacaaacagtggca
ggactttatgcatctcctcctcacaagccctgcatatgtaaactgtaagc
ctaatctaacaaacccttctaaggagactctttctgaagaaggtaggatc
ctacatgggttttgatttcctttatccttaagaggtttccgcctgcagat
catatagctgaaaatgctttaaattataaacaagaatgatgtgctttccc
tatgattagcagcactaaaagtttgctgctgtctgtacctgaacagaggg
atgtgggtatggaggcagaagcggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_97734703_97735196
seq2: B6Ng01-164A02.b_49_542 (reverse)

seq1  CCACACCCCCTCCACCCCAGTTGGGGTTAGTGTGAAAGGGAGTCGGATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCCCTCCACCCCAGTTGGGGTTAGTGTGAAAGGGAGTCGGATGA  50

seq1  GCTAATGAGCTGTGTTTTTTCGCTGTTTCTAATGGCGCTTGTCTTCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGAGCTGTGTTTTTTCGCTGTTTCTAATGGCGCTTGTCTTCTGTA  100

seq1  ATGGCATTGCCTCACAGCAGATTCAGAGCGCTTTCCCTAGGAATGGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATTGCCTCACAGCAGATTCAGAGCGCTTTCCCTAGGAATGGTGAG  150

seq1  GACACCACCTTACCTGGATGGTGAAATCCAGCGAACACATCAGCCTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCACCTTACCTGGATGGTGAAATCCAGCGAACACATCAGCCTTTAT  200

seq1  CTTTCCTCTGGGCAGCGTTGGATGCTGATGACCACATCTGCCTTGACGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCTGGGCAGCGTTGGATGCTGATGACCACATCTGCCTTGACGCA  250

seq1  CTCACTGTTTTCCTTTGATTTCCATGCACTGCTTTGCTTTGCTTTGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTTTTCCTTTGATTTCCATGCACTGCTTTGCTTTGCTTTGCTTT  300

seq1  GTTTTTGTTGTTTTCCACCTTAGCCATGGCTCATCCGCATCCTTTGCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTTGTTTTCCACCTTAGCCATGGCTCATCCGCATCCTTTGCAAG  350

seq1  TTTCTCTTCCCTTATAAGCTCCTGCAGTGTTGCTGCTAGAGATCCTGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTCCCTTATAAGCTCCTGCAGTGTTGCTGCTAGAGATCCTGTAC  400

seq1  TGTACCAGCCGTTTTACTTCATATCTTCAAGGGAAGTCTAGCCCTCCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCAGCCGTTTTACTTCATATCTTCAAGGGAAGTCTAGCCCTCCCAT  450

seq1  AGCACTATGAGATCTATATATCAATAGTAGCTTCCCCAGAATTC  494
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTATGAGATCTATATATCAATAGTAGCTTCCCCAGAATTC  494

seq1: chr3_97541525_97542203
seq2: B6Ng01-164A02.g_65_743

seq1  GAATTCTCACCGGAGGTTTCTGAGTGGGTGGGTCTAGTTTCTGAGTGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCGGAGGTTTCTGAGTGGGTGGGTCTAGTTTCTGAGTGGGT  50

seq1  AGGTCTAGTTTCTGAGTGGGTAGGTCTAGTTTCTGAGTGGGTGGGTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTAGTTTCTGAGTGGGTAGGTCTAGTTTCTGAGTGGGTGGGTCTAG  100

seq1  TGTTCAGAACCACGGCATTCAAAAGAGTGTCTGAGCAACGGGATCAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGAACCACGGCATTCAAAAGAGTGTCTGAGCAACGGGATCAGAGC  150

seq1  TTTGCAGTGACAGCTGGAGTTAACAAACTTGGCTTCGTAGTCAGGTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTGACAGCTGGAGTTAACAAACTTGGCTTCGTAGTCAGGTGCTC  200

seq1  AGGCAGCCAATCAAATGTTACTTCTGAGAAGGAAGCAGGTGTCAGCGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCCAATCAAATGTTACTTCTGAGAAGGAAGCAGGTGTCAGCGCAG  250

seq1  TGTGACCCGAAGCTTCTCTTCCTGACCATGAGACTCCAGATCTAGTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCCGAAGCTTCTCTTCCTGACCATGAGACTCCAGATCTAGTGTGC  300

seq1  AGACTAGAAGCTAGAGAGCTGAATTTTCTCAAACTATTTTCTATGCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGAAGCTAGAGAGCTGAATTTTCTCAAACTATTTTCTATGCTCTG  350

seq1  ATCTCAGCTCTCACTACCTAGATACTGAACTAGGAGCACAAACAGTGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGCTCTCACTACCTAGATACTGAACTAGGAGCACAAACAGTGGCA  400

seq1  GGACTTTATGCATCTCCTCCTCACAAGCCCTGCATATGTAAACTGTAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTATGCATCTCCTCCTCACAAGCCCTGCATATGTAAACTGTAAGC  450

seq1  CTAATCTAACAAACCCTTCTAAGGAGACTCTTTCTGAAGAAGGTAGGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTAACAAACCCTTCTAAGGAGACTCTTTCTGAAGAAGGTAGGATC  500

seq1  CTACATGGGTTTTGATTTCCTTTATCCTTAAGAGGTTTCCGCCTGCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGGGTTTTGATTTCCTTTATCCTTAAGAGGTTTCCGCCTGCAGAT  550

seq1  CATATAGCTGAAAATGCTTTAAATTATAAACAAGAATGATGTGCTTTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGCTGAAAATGCTTTAAATTATAAACAAGAATGATGTGCTTTCCC  600

seq1  TATGATTAGCAGCACTAAAAGTTTGCTGCTGTCTGTACCTGAACAGAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTAGCAGCACTAAAAGTTTGCTGCTGTCTGTACCTGAACAGAGGG  650

seq1  ATGTGGGTATGGAGGCAGAAGCGGGGGGG  679
      |||||||||||||||||||||||||||||
seq2  ATGTGGGTATGGAGGCAGAAGCGGGGGGG  679