BAC Information

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BAC

Clone NameB6Ng01-164A11
Chromosome3 (Build37)
Map Location 78,422,689 - 78,423,802
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626461, LOC667526, LOC626479, LOC100041691
Downstream geneLOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164A11.bB6Ng01-164A11.g
ACCDH956465DH956466
length1,1031,176
definitionDH956465|Mus musculus domesticus DNA, BAC clone: B6Ng01-164A11, 5' end.DH956466|Mus musculus domesticus DNA, BAC clone: B6Ng01-164A11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgactgggacagaaataagcctaagtgtttgtgaggtgatat
tccccgaattaagttttatcacactttcttccatggcctttcatttattt
gatctgaataatttgaagaccaagaaacaaagcagagggacatgttaaca
atgaacatggaagtaacatggtgttttcttactgtctttctagaaattca
aaattaacaacaacaacagcaacaacaacaacaaacaatactgtaaatgg
taggtaggaatttgaggggtgctttaaaggaatttcagggaaaacacttc
ccctttgaacttgtgcgagtctatcaggatgcttttttttccatttttta
ttaggtatttagctcatttgcatttccaatgctatcccaaaagtccccct
tatctttagcgcagtggcagccccgggctgtgttccttgtcctctctttt
cactgtgtcatgtacatccccgcatcagtttcacaagaatatgattctga
atgttctttttgtttttatttttgccaaattcctcttgactctcaaagtc
agaccacgaggcatgactgttaacacccatgaatgtctttccatagacta
gagacaattaatttcctgacaggcaacatatctatatctgtatctgtgtc
tctgtgtgtgtctcctttttctaaatgcagaaattgaaagttttatagag
ggttttcaaagcttccagatctggactcaggaaacggttctgaaaatctc
tcacccacactgacttcactgtcctgtaggtggcaggccactgctatgtt
ttcttctcagctttctaagagctgggtttcacagttgccagctggcgcag
gtgcctgttcccagactaagcaccatctagtttcagtacttctgcatcca
tttctgtctcttctgaagtcgtcttgaacttctgctcagttaatttacct
gtttctgaagaagggccctgctgcttcatattatgttattacttgcaata
cttccctgtttcactctaataacttgcacttgcatacaatcattcaacca
ctttctggtcatttataactggagctggctaaacctgcttatataataag
cat
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactacaggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaatttggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggatttacagagatggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagaagaaagtagccaaggagctaagggatctgcaaccta
atagtggaacaacatatgagctaaccagtacccggagctcttgactctag
ctgcttattatcaaagatgggcctagtcggcctcactggaaagaaggcca
ttgacttgcaaactttatggctcatacagggaaatcccagggcacaaagg
gaatagtgtgctagagcgaatgcgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_78422689_78423802
seq2: B6Ng01-164A11.b_48_1150 (reverse)

seq1  ATGCTTTATTTATATAAGCAGGTTTTAGACAGACTCAGTATATAAATGA-  49
      ||||||   ||||||||||||| ||||| |||   |||| ||||||||| 
seq2  ATGCTT--ATTATATAAGCAGG-TTTAGCCAGCTCCAGT-TATAAATGAC  46

seq1  CAGGAAGTGGTTTTGAAATGTATGTATGCATGTGCAAGTTATTAGAGTGA  99
      ||| ||||||||    ||||  |||||||| |||||||||||||||||| 
seq2  CAGAAAGTGGTT---GAATGATTGTATGCAAGTGCAAGTTATTAGAGTG-  92

seq1  AAACAGGGATGTATTTGCAAGTAATTAACATAATTTATG-AGCAGCAGGG  148
      ||||||||| ||| |||||||||| ||||||||  |||| ||||||||||
seq2  AAACAGGGAAGTA-TTGCAAGTAA-TAACATAA--TATGAAGCAGCAGGG  138

seq1  CCCTTTCTCAGAAACAGGTAAATAAACTGAGCAGAAGTTCAAGACGACTT  198
      |||||  |||||||||||||||| ||||||||||||||||||||||||||
seq2  CCCTTCTTCAGAAACAGGTAAATTAACTGAGCAGAAGTTCAAGACGACTT  188

seq1  CAGAAGAGACAGAAATGGATGCAGAAGTACTTGAAAACTAGATGGTGCTT  248
      |||||||||||||||||||||||||||||||   ||||||||||||||||
seq2  CAGAAGAGACAGAAATGGATGCAGAAGTACT--GAAACTAGATGGTGCTT  236

seq1  AGTCTGGGAACAGGCACCTGCGCCAGCTGGCAACTGTGAAACCCAGCTCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGGAACAGGCACCTGCGCCAGCTGGCAACTGTGAAACCCAGCTCT  286

seq1  TAGAAAGCTGAGAAGAAAACATAGCAGTGGCCTGCCACCTACAGGACAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGCTGAGAAGAAAACATAGCAGTGGCCTGCCACCTACAGGACAGT  336

seq1  GAAGTCAGTGTGGGTGAGAGATTTTCAGAACCGTTTCCTGAGTCCAGATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGTGTGGGTGAGAGATTTTCAGAACCGTTTCCTGAGTCCAGATC  386

seq1  TGGAAGCTTTGAAAACCCTCTATAAAACTTTCAATTTCTGCATTTAG-AA  447
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGGAAGCTTTGAAAACCCTCTATAAAACTTTCAATTTCTGCATTTAGAAA  436

seq1  AAGGAGACACACACAGAGACACAGATACAGATATAGATATGTTGCCTGTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGACACACACAGAGACACAGATACAGATATAGATATGTTGCCTGTC  486

seq1  AGGAAATTAATTGTCTCTAGTCTATGGAAAGACATTCATGGGTGTTAACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATTAATTGTCTCTAGTCTATGGAAAGACATTCATGGGTGTTAACA  536

seq1  GTCATGCCTCGTGGTCTGACTTTGAGAGTCAAGAGGAATTTGGCAAAAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGCCTCGTGGTCTGACTTTGAGAGTCAAGAGGAATTTGGCAAAAAT  586

seq1  AAAAACAAAAAGAACATTCAGAATCATATTCTTGTGAAACTGATGCGGGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAAGAACATTCAGAATCATATTCTTGTGAAACTGATGCGGGG  636

seq1  ATGTACATGACACAGTGAAAAGAGAGGACAAGGAACACAGCCCGGGGCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATGACACAGTGAAAAGAGAGGACAAGGAACACAGCCCGGGGCTG  686

seq1  CCACTGCGCTAAAGATAAGGGGGACTTTTGGGATAGCATTGGAAATGCAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCGCTAAAGATAAGGGGGACTTTTGGGATAGCATTGGAAATGCAA  736

seq1  ATGAGCTAAATACCTAATAAAAAATGGAAAAAAAAGCATCCTGATAGACT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTAAATACCTAATAAAAAATGGAAAAAAAAGCATCCTGATAGACT  786

seq1  CGCACAAGTTCAAAGGGGAAGTGTTTTCCCTGAAATTCCTTTAAAGCACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACAAGTTCAAAGGGGAAGTGTTTTCCCTGAAATTCCTTTAAAGCACC  836

seq1  CCTCAAATTCCTACCTACCATTTACAGTATTGTTTGTTGTTGTTGTTGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAATTCCTACCTACCATTTACAGTATTGTTTGTTGTTGTTGTTGCT  886

seq1  GTTGTTGTTGTTAATTTTGAATTTCTAGAAAGACAGTAAGAAAACACCAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTTGTTAATTTTGAATTTCTAGAAAGACAGTAAGAAAACACCAT  936

seq1  GTTACTTCCATGTTCATTGTTAACATGTCCCTCTGCTTTGTTTCTTGGTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTCCATGTTCATTGTTAACATGTCCCTCTGCTTTGTTTCTTGGTC  986

seq1  TTCAAATTATTCAGATCAAATAAATGAAAGGCCATGGAAGAAAGTGTGAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTATTCAGATCAAATAAATGAAAGGCCATGGAAGAAAGTGTGAT  1036

seq1  AAAACTTAATTCGGGGAATATCACCTCACAAACACTTAGGCTTATTTCTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTAATTCGGGGAATATCACCTCACAAACACTTAGGCTTATTTCTG  1086

seq1  TCCCAGTCAATGAATTC  1114
      |||||||||||||||||
seq2  TCCCAGTCAATGAATTC  1103