BAC Information

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BAC

Clone NameB6Ng01-164B22
Chromosome3 (Build37)
Map Location 65,185,035 - 65,331,250
singlet/doubletdoublet
Overlap geneSsr3, EG433604, EG667093, LOC100041083
Upstream gene4930518C23Rik, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110, Kcnab1
Downstream gene4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866, Ccnl1, LOC625048, Veph1, Tpi-rs2, Ptx3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164B22.bB6Ng01-164B22.g
ACCDH956533DH956534
length6491,122
definitionDH956533|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B22, 5' end.DH956534|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,330,602 - 65,331,250)(65,185,035 - 65,186,159)
sequence
gaattcaaagactagtatataagcaaaattaaactatttttaaaaaacta
taataagattgcagtatttccaacgttttaaaactgtcccaactttacct
actaacttaatgattaccaaaaatatttgcaaaaacaatgttttaagtaa
atttatggttttatgttgggttgcatccaaacttaatcctgggacacaca
catgcagccctcatgtctccggttgaacatactatatttggggttaaatc
tatcattttactacgtatttttttctctcatctattttgtttgttcaatt
tgctttcgtgctacttttaaaattccattctcttccaacaatttttttat
acattctttatactttcagtactgtttcagttactgctatgtacaaatca
cccccaaatatagctatttaaaaccataactgatttgttcatgatcccgg
gctctttgctcaggaattccaccaggacagagtgccagtagctcatctgt
acagcttgaaggctgggcctgcctagtctaactgaaatctcttaggacac
aaggtcgaagctagtgtctcagcacaaatgagctgacaatgatgtagaaa
atgcaaagatggaatctaagaatgctggagaagccaggtggtggtggtg
gaattccagggttacgttcacaaaaattcttttggtctctcatgtgtcaa
taatcacagtagaaatactctctcacttaatattctgcctgtggtgcgaa
agcctggtcatagacacaatgatcccagtgacttcgcacatcaaaccaac
atggcagggtcaagctgacctcccggccacccagggccaaagccatacag
ctgaacagtgtgtgctttggcctcacaggccaacactcataggcctgggt
actatttttaggtaactaccttggctgcctttcttttaaaaaaaaaaaaa
aaaagattctgcaagtttccctccctcaaattggagaggccctgtaattt
acaattaactttgagttattataaattacaaatttgaagccttgttaaaa
agaaaatgaggcttctgtttaattccttaggaagaggattcactctaaga
tttacagttcgaaaagttgtaatattgtgcttggaacacagagaaccagt
tattaacttcttcctcctattataaataataacagctcagtccaggttac
catgacctctgacagatgtaggaaacaagttattttctcctcgtgattac
agcacattgcaagactccttgccttttaataaaatgccctggtactctga
gtttccctttcaattcatttaatttcagcaatctgtcaaaaacagccaat
aaacaaacactgaattacattctactgcatttttaaaccctgaagctcca
gactataaaaacaacttatgtgtctcccaacctggccaccctgatgcttt
cccatataccacaggccacccccgagatacaaaggcagagggccaagcta
catggtctatttggagccagtagacaagagggcgatgagtccagatgaag
cacttatggacaaaatgtagtttctgtagatttaatgttaaggaaaaaaa
atgagaccccctaaattagttttacataagacttttccttattgacacaa
tattgtagatgtagtggactgtcagtaacacaatctacagcatgggaggc
taataaacatgacaaaaatacctacaagcaatatgcttcaatactgaaaa
gacaccttgggacaaacttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_65330602_65331250
seq2: B6Ng01-164B22.b_46_694 (reverse)

seq1  CACCACCACCACCTGGCTTCTCCAGCATTCTTAGATTCCATCTTTGCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACCACCTGGCTTCTCCAGCATTCTTAGATTCCATCTTTGCATT  50

seq1  TTCTACATCATTGTCAGCTCATTTGTGCTGAGACACTAGCTTCGACCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATCATTGTCAGCTCATTTGTGCTGAGACACTAGCTTCGACCTTG  100

seq1  TGTCCTAAGAGATTTCAGTTAGACTAGGCAGGCCCAGCCTTCAAGCTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAAGAGATTTCAGTTAGACTAGGCAGGCCCAGCCTTCAAGCTGTA  150

seq1  CAGATGAGCTACTGGCACTCTGTCCTGGTGGAATTCCTGAGCAAAGAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAGCTACTGGCACTCTGTCCTGGTGGAATTCCTGAGCAAAGAGCC  200

seq1  CGGGATCATGAACAAATCAGTTATGGTTTTAAATAGCTATATTTGGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGATCATGAACAAATCAGTTATGGTTTTAAATAGCTATATTTGGGGGT  250

seq1  GATTTGTACATAGCAGTAACTGAAACAGTACTGAAAGTATAAAGAATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTACATAGCAGTAACTGAAACAGTACTGAAAGTATAAAGAATGTA  300

seq1  TAAAAAAATTGTTGGAAGAGAATGGAATTTTAAAAGTAGCACGAAAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAATTGTTGGAAGAGAATGGAATTTTAAAAGTAGCACGAAAGCAA  350

seq1  ATTGAACAAACAAAATAGATGAGAGAAAAAAATACGTAGTAAAATGATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACAAACAAAATAGATGAGAGAAAAAAATACGTAGTAAAATGATAG  400

seq1  ATTTAACCCCAAATATAGTATGTTCAACCGGAGACATGAGGGCTGCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACCCCAAATATAGTATGTTCAACCGGAGACATGAGGGCTGCATGT  450

seq1  GTGTGTCCCAGGATTAAGTTTGGATGCAACCCAACATAAAACCATAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCCCAGGATTAAGTTTGGATGCAACCCAACATAAAACCATAAATT  500

seq1  TACTTAAAACATTGTTTTTGCAAATATTTTTGGTAATCATTAAGTTAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAAACATTGTTTTTGCAAATATTTTTGGTAATCATTAAGTTAGTA  550

seq1  GGTAAAGTTGGGACAGTTTTAAAACGTTGGAAATACTGCAATCTTATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGTTGGGACAGTTTTAAAACGTTGGAAATACTGCAATCTTATTAT  600

seq1  AGTTTTTTAAAAATAGTTTAATTTTGCTTATATACTAGTCTTTGAATTC  649
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTAAAAATAGTTTAATTTTGCTTATATACTAGTCTTTGAATTC  649

seq1: chr3_65185035_65186159
seq2: B6Ng01-164B22.g_66_1187

seq1  GAATTCCAGGGTTACGTTCACAAAAATTCTTTTGGTCTCTCATGTGTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGTTACGTTCACAAAAATTCTTTTGGTCTCTCATGTGTCAA  50

seq1  TAATCACAGTAGAAATACTCTCTCACTTAATATTCTGCCTGTGGTGCGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACAGTAGAAATACTCTCTCACTTAATATTCTGCCTGTGGTGCGAA  100

seq1  AGCCTGGTCATAGACACAATGATCCCAGTGACTTCGCACATCAAACCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCATAGACACAATGATCCCAGTGACTTCGCACATCAAACCAAC  150

seq1  ATGGCAGGGTCAAGCTGACCTCCCGGCCACCCAGGGCCAAAGCCATACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGGGTCAAGCTGACCTCCCGGCCACCCAGGGCCAAAGCCATACAG  200

seq1  CTGAACAGTGTGTGCTTTGGCCTCACAGGCCAACACTCATAGGCCTGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAGTGTGTGCTTTGGCCTCACAGGCCAACACTCATAGGCCTGGGT  250

seq1  ACTATTTTTAGGTAACTACCTTGGCTGCCTTTCTTTTAAAAAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTTAGGTAACTACCTTGGCTGCCTTTCTTTTAAAAAAAAAAAAA  300

seq1  AAAAGATTCTGCAAGTTTCCCTCCCTCAAATTGGAGAGGCCCTGTAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTCTGCAAGTTTCCCTCCCTCAAATTGGAGAGGCCCTGTAATTT  350

seq1  ACAATTAACTTTGAGTTATTATAAATTACAAATTTGAAGCCTTGTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTAACTTTGAGTTATTATAAATTACAAATTTGAAGCCTTGTTAAAA  400

seq1  AGAAAATGAGGCTTCTGTTTAATTCCTTAGGAAGAGGATTCACTCTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGAGGCTTCTGTTTAATTCCTTAGGAAGAGGATTCACTCTAAGA  450

seq1  TTTACAGTTCGAAAAGTTGTAATATTGTGCTTGGAACACAGAGAACCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGTTCGAAAAGTTGTAATATTGTGCTTGGAACACAGAGAACCAGT  500

seq1  TATTAACTTCTTCCTCCTATTATAAATAATAACAGCTCAGTCCAGGTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACTTCTTCCTCCTATTATAAATAATAACAGCTCAGTCCAGGTTAC  550

seq1  CATGACCTCTGACAGATGTAGGAAACAAGTTATTTTCTCCTCGTGATTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCTCTGACAGATGTAGGAAACAAGTTATTTTCTCCTCGTGATTAC  600

seq1  AGCACATTGCAAGACTCCTTGCCTTTTAATAAAATGCCCTGGTACTCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATTGCAAGACTCCTTGCCTTTTAATAAAATGCCCTGGTACTCTGA  650

seq1  GTTTCCCTTTCAATTCATTTAATTTCAGCAATCTGTCAAAAACAGCCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCTTTCAATTCATTTAATTTCAGCAATCTGTCAAAAACAGCCAAT  700

seq1  AAACAAACACTGAATTACATTCTACTGCATTTTTAAACCCTGAAGCTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACACTGAATTACATTCTACTGCATTTTTAAACCCTGAAGCTCCA  750

seq1  GACTATAAAAACAACTTATGTGTCTCCCAACCTGGCCACCCTGATGCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATAAAAACAACTTATGTGTCTCCCAACCTGGCCACCCTGATGCTTT  800

seq1  CCCATATACCACAGGCCA-CCCCGAGATACAAAGGCAGAGGGCCAAGCTA  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCCATATACCACAGGCCACCCCCGAGATACAAAGGCAGAGGGCCAAGCTA  850

seq1  CATGGTCTATTTGGAGCCAGTAGACAAGAGGGCGATGAGTCCAGATGAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCTATTTGGAGCCAGTAGACAAGAGGGCGATGAGTCCAGATGAAG  900

seq1  CACTTATGGACAAAATGTAGTTTCTGTAAGATTTAATGTTAAGGAAAAAA  949
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CACTTATGGACAAAATGTAGTTTCTGT-AGATTTAATGTTAAGGAAAAAA  949

seq1  AATGAGACCCCCTAAATTAGGTTTTTAACAATAAGACTTTTCCTTATTGA  999
      ||||||||||||||||||||  |||||   ||||||||||||||||||||
seq2  AATGAGACCCCCTAAATTAG--TTTTA--CATAAGACTTTTCCTTATTGA  995

seq1  CACAAATATGTAGATGTAGTTGGACTGTCAGTAAACACAATCTACAGCAT  1049
      |||||   ||||||||||| |||||||||||| |||||||||||||||||
seq2  CACAATATTGTAGATGTAG-TGGACTGTCAGT-AACACAATCTACAGCAT  1043

seq1  GGGAGGCT-ATAAACATGAC-AAAATACCTACAAGCAATATGCTTCAATA  1097
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  GGGAGGCTAATAAACATGACAAAAATACCTACAAGCAATATGCTTCAATA  1093

seq1  CTGAAAAGACA-CTTGGGACAAACTTAAA  1125
      ||||||||||| |||||||||||||||||
seq2  CTGAAAAGACACCTTGGGACAAACTTAAA  1122