BAC Information

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BAC

Clone NameB6Ng01-164D22
Chromosome3 (Build37)
Map Location 75,373,509 - 75,495,137
singlet/doubletdoublet
Overlap geneSerpini1
Upstream geneLOC100041551, EG667459, BC050789, Serpini2, Wdr49, Pdcd10
Downstream geneGolph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164D22.bB6Ng01-164D22.g
ACCDH956621DH956622
length1,1081,161
definitionDH956621|Mus musculus domesticus DNA, BAC clone: B6Ng01-164D22, 5' end.DH956622|Mus musculus domesticus DNA, BAC clone: B6Ng01-164D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,494,028 - 75,495,137)(75,373,509 - 75,374,678)
sequence
gaattcagattgctagcaccagacagtatgaagacagaggaaagaaaatc
ccatgctttgctggcaagccagtctagccacatctgtgggctccaggatc
agtgagaaacctgcctgaaaaatcagatgaagtgccagtgagatggatca
gcaggtagaagtagtgctgatagtctgagccaactcctatagccagtggt
ggaaggaaacaaaagacttctgaaagttgtctactttctgcatgtgcatc
atgatactggtgtgcctgcattcacacacacatacacacacacacacaca
cacacacacacacacacacacattataatgcatgcataatagtaaatata
ataaaaatttattttaaaatatggagagtaactgaggacaaaaactgaca
ctgaccacatactgatctgctggcctgtatgcatacatccatatatatat
atacactcactgaccaaaatagatattcagactactatttctttacttta
agtttggtttgtgactatattgagatttttttcccctcatggtttatgga
acagaaccaagaaacatgattttattataggtagcaaagttttggcagta
aactatcaaataaattcatttattcatctacccaaccatctgtctgttgc
tagtagttacaccctagaagttggcaggatgtatgaagcaggaagtatac
agtgtctggtgggtcaatgactttaatgttcatcatgcatcctcaagatt
gacatcaacccactgataacagactagagtatcatgtttactttccagaa
gtaagacataaacatttcataaagttgaaaatgaggtaaacttgcccaaa
aaaagcaaacacacacacacacacacacacacacacaccaaacatacaaa
caaacaaacaaaccacaaaatgccagtaagctaaaaagcaatgactgtct
tacttacttttttctatcctgagtctttcttgcgcagactgaaggactga
gtacacggatcctaccatagcctgagtgtagatacctgaccatcaaaaac
attcacatccatattcaaccacagtattgaccacctttgcagaaagaaca
cttcattt
gaattccagcatttagaggtaaaatagatcaatggatccccagggtaact
gggtacctaaactagatggtattgactagccgtgtggctaggttcagcaa
gaacgaatatatatatatacaacacacataccaaaaatatattttatatg
ctacaatcaaaatctaaaacattcatttataagaaatataaatagaatat
aaatacttagtaatacatttaaaaaaaggaagtacatgacttgggcacca
aaatcatcagttaatgtacaaaacatcattgaaagaaagttaaagatgga
agactgaaattgttaagatggtcatattctccaaaataatattcatattc
agtatatcatgatattagctgctggtgttttgttgtcttggtttttgttg
ttgttgtttattcattggttttgtttgtagaaattggcagcttggacatg
gaacttaagttgtagagctggagagatgcctcagcaattgctagtgctag
cgcttgctactcttgcagtagttctggcctggttccttacaccagcattg
ggcagcctataactgtagttccaggtacaagggatctgtcacctcacgtc
tgagggtgctaggcattcacacatactacacataaaataaaaataaatat
ttttctaaaacgatatatgtggaaagttggaaggaagccagacagatagg
tttcactgcaataaaatttagtgtacagaaaaatagtccttacagagggg
ttcatttgattttgagagtgatggtaagatggaaaatgcaatacagaaag
gatagtcttcaaataaaatatcaggacaactagatagatatatacatacg
aaagcataaaattgagccctaccgcataccatatacaatatgtaacttta
aatggaccatgagcctgagtgtgggatcttactcagtggaactcatagag
agttagattggattagatggagtttctaaggtcagcaaagcctacggaaa
aagttagatttcattaaacctaaatgttatgcttcagagaacaaaaggta
agaatctgtagaagaccctcaaaatttagagaatgattcaaattcatatt
taaggagactcgtatctaaaatttttataaagaggaaataaaatggcgga
aaagatctaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75494028_75495137
seq2: B6Ng01-164D22.b_46_1153 (reverse)

seq1  AAATGAAGTGTTCTTTCTGCAAAGGTGGTTCAATACTGTGGTTTGAATAT  50
      |||||||||||||||||||||||||||| |||||||||||| ||||||||
seq2  AAATGAAGTGTTCTTTCTGCAAAGGTGG-TCAATACTGTGG-TTGAATAT  48

seq1  GGATGTGAATGTTTTTGATGGTCAGGTATCTACACTCAGGCTATGGTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGAATGTTTTTGATGGTCAGGTATCTACACTCAGGCTATGGTAGG  98

seq1  ATCCGTGTACTCAGTCCTTCAGTCTGCGCAAGAAAGACTCAGGATAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTGTACTCAGTCCTTCAGTCTGCGCAAGAAAGACTCAGGATAGAAA  148

seq1  AAAGTAAGTAAGACAGTCATTGCTTTTTAGCTTACTGGCATTTTGTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAGTAAGACAGTCATTGCTTTTTAGCTTACTGGCATTTTGTGGTT  198

seq1  TGTTTGTTTGTTTGTATGTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTGTATGTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGT  248

seq1  GTTTGCTTTTTTTGGGCAAGTTTACCTCATTTTCAACTTTATGAAATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTTTTTTGGGCAAGTTTACCTCATTTTCAACTTTATGAAATGTT  298

seq1  TATGTCTTACTTCTGGAAAGTAAACATGATACTCTAGTCTGTTATCAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTACTTCTGGAAAGTAAACATGATACTCTAGTCTGTTATCAGTG  348

seq1  GGTTGATGTCAATCTTGAGGATGCATGATGAACATTAAAGTCATTGACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATGTCAATCTTGAGGATGCATGATGAACATTAAAGTCATTGACCC  398

seq1  ACCAGACACTGTATACTTCCTGCTTCATACATCCTGCCAACTTCTAGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACACTGTATACTTCCTGCTTCATACATCCTGCCAACTTCTAGGGT  448

seq1  GTAACTACTAGCAACAGACAGATGGTTGGGTAGATGAATAAATGAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTACTAGCAACAGACAGATGGTTGGGTAGATGAATAAATGAATTTA  498

seq1  TTTGATAGTTTACTGCCAAAACTTTGCTACCTATAATAAAATCATGTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAGTTTACTGCCAAAACTTTGCTACCTATAATAAAATCATGTTTC  548

seq1  TTGGTTCTGTTCCATAAACCATGAGGGGAAAAAAATCTCAATATAGTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCTGTTCCATAAACCATGAGGGGAAAAAAATCTCAATATAGTCAC  598

seq1  AAACCAAACTTAAAGTAAAGAAATAGTAGTCTGAATATCTATTTTGGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAACTTAAAGTAAAGAAATAGTAGTCTGAATATCTATTTTGGTCA  648

seq1  GTGAGTGTATATATATATATGGATGTATGCATACAGGCCAGCAGATCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGTATATATATATATGGATGTATGCATACAGGCCAGCAGATCAGT  698

seq1  ATGTGGTCAGTGTCAGTTTTTGTCCTCAGTTACTCTCCATATTTTAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTCAGTGTCAGTTTTTGTCCTCAGTTACTCTCCATATTTTAAAAT  748

seq1  AAATTTTTATTATATTTACTATTATGCATGCATTATAATGTGTGTGTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTATTATATTTACTATTATGCATGCATTATAATGTGTGTGTGTG  798

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGAATGCAGGCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGAATGCAGGCACA  848

seq1  CCAGTATCATGATGCACATGCAGAAAGTAGACAACTTTCAGAAGTCTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATCATGATGCACATGCAGAAAGTAGACAACTTTCAGAAGTCTTTT  898

seq1  GTTTCCTTCCACCACTGGCTATAGGAGTTGGCTCAGACTATCAGCACTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTCCACCACTGGCTATAGGAGTTGGCTCAGACTATCAGCACTAC  948

seq1  TTCTACCTGCTGATCCATCTCACTGGCACTTCATCTGATTTTTCAGGCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTGCTGATCCATCTCACTGGCACTTCATCTGATTTTTCAGGCAG  998

seq1  GTTTCTCACTGATCCTGGAGCCCACAGATGTGGCTAGACTGGCTTGCCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCACTGATCCTGGAGCCCACAGATGTGGCTAGACTGGCTTGCCAG  1048

seq1  CAAAGCATGGGATTTTCTTTCCTCTGTCTTCATACTGTCTGGTGCTAGCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCATGGGATTTTCTTTCCTCTGTCTTCATACTGTCTGGTGCTAGCA  1098

seq1  ATCTGAATTC  1110
      ||||||||||
seq2  ATCTGAATTC  1108

seq1: chr3_75373509_75374678
seq2: B6Ng01-164D22.g_66_1226

seq1  GAATTCCAGCATTTAGAGGTAAAATAGATCAATGGATCCCCAGGGTAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCATTTAGAGGTAAAATAGATCAATGGATCCCCAGGGTAACT  50

seq1  GGGTACCTAAACTAGATGGTATTGACTAGCCGTGTGGCTAGGTTCAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACCTAAACTAGATGGTATTGACTAGCCGTGTGGCTAGGTTCAGCAA  100

seq1  GAACGAATATATATATATACAACACACATACCAAAAATATATTTTATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGAATATATATATATACAACACACATACCAAAAATATATTTTATATG  150

seq1  CTACAATCAAAATCTAAAACATTCATTTATAAGAAATATAAATAGAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATCAAAATCTAAAACATTCATTTATAAGAAATATAAATAGAATAT  200

seq1  AAATACTTAGTAATACATTTAAAAAAAGGAAGTACATGACTTGGGCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTAGTAATACATTTAAAAAAAGGAAGTACATGACTTGGGCACCA  250

seq1  AAATCATCAGTTAATGTACAAAACATCATTGAAAGAAAGTTAAAGATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCAGTTAATGTACAAAACATCATTGAAAGAAAGTTAAAGATGGA  300

seq1  AGACTGAAATTGTTAAGATGGTCATATTCTCCAAAATAATATTCATATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAAATTGTTAAGATGGTCATATTCTCCAAAATAATATTCATATTC  350

seq1  AGTATATCATGATATTAGCTGCTGGTGTTTTGTTGTCTTGGTTTTTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATCATGATATTAGCTGCTGGTGTTTTGTTGTCTTGGTTTTTGTTG  400

seq1  TTGTTGTTTATTCATTGGTTTTGTTTGTAGAAATTGGCAGCTTGGACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTTATTCATTGGTTTTGTTTGTAGAAATTGGCAGCTTGGACATG  450

seq1  GAACTTAAGTTGTAGAGCTGGAGAGATGCCTCAGCAATTGCTAGTGCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTAAGTTGTAGAGCTGGAGAGATGCCTCAGCAATTGCTAGTGCTAG  500

seq1  CGCTTGCTACTCTTGCAGTAGTTCTGGCCTGGTTCCTTACACCAGCATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTGCTACTCTTGCAGTAGTTCTGGCCTGGTTCCTTACACCAGCATTG  550

seq1  GGCAGCCTATAACTGTAGTTCCAGGTACAAGGGATCTGTCACCTCACGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCCTATAACTGTAGTTCCAGGTACAAGGGATCTGTCACCTCACGTC  600

seq1  TGAGGGTGCTAGGCATTCACACATACTACACATAAAATAAAAATAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTGCTAGGCATTCACACATACTACACATAAAATAAAAATAAATAT  650

seq1  TTTTCTAAAACGATATATGTGGAAAGTTGGAAGGAAGCCAGACAGATAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAAAACGATATATGTGGAAAGTTGGAAGGAAGCCAGACAGATAGG  700

seq1  TTTCACTGCAATAAAATTTAGTGTACAGAAAAATAGTCCTTACAGAGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGCAATAAAATTTAGTGTACAGAAAAATAGTCCTTACAGAGGGG  750

seq1  TTCATTTGATTTTGAGAGTGATGGTAAGATGGAAAATGCAATACAGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGATTTTGAGAGTGATGGTAAGATGGAAAATGCAATACAGAAAG  800

seq1  GATAGTCTTCAAATAAAATATCAGGACAACTAGATAGATATATACATACG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTCTTCAAATAAAATATCAGGACAACTAGATAGATATATACATACG  850

seq1  AAAGCATAAAATTGAGCCCTACCGCATACCATATACAATATGTAACTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATAAAATTGAGCCCTACCGCATACCATATACAATATGTAACTTTA  900

seq1  AATGGACCATGAGCCTGAGTGTGGGATCTTACTCAGTGGAACTCATAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACCATGAGCCTGAGTGTGGGATCTTACTCAGTGGAACTCATAGAG  950

seq1  GAGGTTAGATTGGATTAGATGGAGGTTTCTAGGGTCAGCAAAGCATACGG  1000
         |||||||||||||||||||| ||||||| |||||||||||| ||| |
seq2  --AGTTAGATTGGATTAGATGGA-GTTTCTAAGGTCAGCAAAGCCTAC-G  996

seq1  GAAAAAGTTAGATTTCATTAAACCTAAATGTATATGCTTCAGAGAACAAA  1050
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAAAAAGTTAGATTTCATTAAACCTAAATGT-TATGCTTCAGAGAACAAA  1045

seq1  A-GTAAG-ATCTGAAG-AGACACCAAAAATTGAGA-AATGATTTCCAAAT  1096
      | ||||| ||||| || |||| |  |||||| ||| |||||||  |||||
seq2  AGGTAAGAATCTGTAGAAGACCCTCAAAATTTAGAGAATGATT--CAAAT  1093

seq1  CAAATATTTAAGGAAGAATTTGTATCTAAAATATTTTTAAAAAGAGATGA  1146
         |||||||||||   | | |||||||||  ||||||| ||||||   |
seq2  -TCATATTTAAGGA--GACTCGTATCTAAA--ATTTTTATAAAGAG-GAA  1137

seq1  ATAAAAGTGGTGAAAAGATTTAAA  1170
      ||||||  |  |||||||| ||||
seq2  ATAAAATGGCGGAAAAGATCTAAA  1161