BAC Information

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BAC

Clone NameB6Ng01-164F20
Chromosome3 (Build37)
Map Location 128,513,307 - 128,514,351
singlet/doubletsinglet
Overlap genenone
Upstream geneBC002199, 5730508B09Rik, LOC100043382, EG668828
Downstream geneLOC100043393, EG668831, Pitx2, Enpep, LOC100043415, LOC435755, LOC668840, Elovl6, LOC100043758, Egf, Gm421, Rrh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164F20.bB6Ng01-164F20.g
ACCDH956711DH956712
length1,043873
definitionDH956711|Mus musculus domesticus DNA, BAC clone: B6Ng01-164F20, 5' end.DH956712|Mus musculus domesticus DNA, BAC clone: B6Ng01-164F20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aattttatgtagatttggaaaaacctcacttagtagaaggatcattttct
caattaagacatatagagctctacatttaataaaacaaataggaaagcct
cattagtagcagaattgaattttgaaatttatttatttggatttgagaac
catttaaactagtaaaaaatttcccaggtattcaaatatttttgaaatat
aacagtctggctttgctgggcatcgtggcgcacgcctttgatcccagcac
tcaggaggcagaggcagacagatttctgagtttgaggccagcttggtcta
caaagtgagatccaggacagccagtactgtacagagaaaccctgtctcaa
aaaacaaaaacaaaaaacaaaacaacaacaactaaaaagtctggctttta
cataaaaatagaagattaaaaataaatacattaattaacaaagttagtgt
aaagttatatataaaacttaattttttaaaaaatacatggttatatatat
gtatatatatgcatgtatatatgtatatatatggtacagaaaatataata
tgatacaacatagaagtatagatattgaatgtatgtgttttgaaatcacc
tagtagtagatcctgagtgtgccacctgtatgagtttgggcaagtaattt
agcctgataatgccaaaatcattattttagggaaaagataaactagcatt
tagtttgaaaatcagtattactctgctttgcttcagagttggtagtatat
gctcattagtgataagttcttatttgaaactgctatttacttaattagtt
ataatatgtgtattggtcgtacatgtaccataggacccacatataatggg
gaaacttgaaggaattggttctctccctcctatcacgtgggttcttaata
tttaactcagtttttcagcttgattgctggagccttcagtggtaagctac
cttgttgtcggggttgactttaacattagtaatcacagatcacaggtaca
tttatgaatacttatctctctctctctctctctctctctctct
gaattctctgtttggctctgtacctgatttttaattgagttatttgagtt
gttagtgtctaacttcttgagttctttataaattttgggtattagctctc
tgtcagatatagggttggtgaagatcttttcccaattggtagactcctgt
tttgtcctattgatagtgtcctttgtcttacataagcttttcaatttcgt
gagatcccttttattaattgttgatcttagagtcccagctattggtgttc
tgctcaggtggttgtctcctgtaccaaggagttcaaggctattccccact
tactgttcaattagatttaatgtatccaattttatgttgagatctctgat
ccacttggatttgagttttgtgcagggagatagatatggatttagtcaca
ttttctacatgcagacatcaagttataccaatcctaggcatatatacata
tatagccaaatatgttcaactatcccatagagacacttgttcaactatgt
tcatagcagttttatccataacacctagaaactgaaaactacctagatgt
ccctcaactgaagaatagataaaggaaatgtagtatgtctacacaatgga
atgctattcagtattaaaaacaaatacatcatgaattttacaagcacatg
gatagaacttgaggatatcatcctgagtgaggtagcccagacccaaagaa
caaacatagtatgtacttacttaaagtgcatattagccataaattcagat
acccatgttatgctccatagacctaaagtagctaaacagaagaaagccca
gaaagatgctgattcacttagaaggtaataaatatcaagagcaattgagg
aggaaattgggtgggatggagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_128513307_128514351
seq2: B6Ng01-164F20.b_57_1099

seq1  AATTTTATGTAGATTTGGAAAAACCTCACTTAGTAGAAGGATCATTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATGTAGATTTGGAAAAACCTCACTTAGTAGAAGGATCATTTTCT  50

seq1  CAATTAAGACATATAGAGCTCTACATTTAATAAAACAAATAGGAAAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAGACATATAGAGCTCTACATTTAATAAAACAAATAGGAAAGCCT  100

seq1  CATTAGTAGCAGAATTGAATTTTGAAATTTATTTATTTGGATTTGAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTAGCAGAATTGAATTTTGAAATTTATTTATTTGGATTTGAGAAC  150

seq1  CATTTAAACTAGTAAAAAATTTCCCAGGTATTCAAATATTTTTGAAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAACTAGTAAAAAATTTCCCAGGTATTCAAATATTTTTGAAATAT  200

seq1  AACAGTCTGGCTTTGCTGGGCATCGTGGCGCACGCCTTTGATCCCAGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCTGGCTTTGCTGGGCATCGTGGCGCACGCCTTTGATCCCAGCAC  250

seq1  TCAGGAGGCAGAGGCAGACAGATTTCTGAGTTTGAGGCCAGCTTGGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGGCAGAGGCAGACAGATTTCTGAGTTTGAGGCCAGCTTGGTCTA  300

seq1  CAAAGTGAGATCCAGGACAGCCAGTACTGTACAGAGAAACCCTGTCTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGAGATCCAGGACAGCCAGTACTGTACAGAGAAACCCTGTCTCAA  350

seq1  AAAACAAAAACAAAAAACAAAACAACAACAACTAAAAAGTCTGGCTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAACAAAAAACAAAACAACAACAACTAAAAAGTCTGGCTTTTA  400

seq1  CATAAAAATAGAAGATTAAAAATAAATACATTAATTAACAAAGTTAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAATAGAAGATTAAAAATAAATACATTAATTAACAAAGTTAGTGT  450

seq1  AAAGTTATATATAAAACTTAATTTTTTAAAAAATACATGGTTATATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTATATATAAAACTTAATTTTTTAAAAAATACATGGTTATATATAT  500

seq1  GTATATATATGCATGTATATATGTATATATATGGTACAGAAAATATAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATATGCATGTATATATGTATATATATGGTACAGAAAATATAATA  550

seq1  TGATACAACATAGAAGTATAGATATTGAATGTATGTGTTTTGAAATCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAACATAGAAGTATAGATATTGAATGTATGTGTTTTGAAATCACC  600

seq1  TAGTAGTAGATCCTGAGTGTGCCACCTGTATGAGTTTGGGCAAGTAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTAGATCCTGAGTGTGCCACCTGTATGAGTTTGGGCAAGTAATTT  650

seq1  AGCCTGATAATGCCAAAATCATTATTTTAGGGAAAAGATAAACTAGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGATAATGCCAAAATCATTATTTTAGGGAAAAGATAAACTAGCATT  700

seq1  TAGTTTGAAAATCAGTATTACTCTGC-TTGCTTCAGAGTTGGTAGTATAT  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TAGTTTGAAAATCAGTATTACTCTGCTTTGCTTCAGAGTTGGTAGTATAT  750

seq1  GCTCATTAGTGATAAGTTCTTATTTGAAACTGCTATTTACTTAATTAGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTAGTGATAAGTTCTTATTTGAAACTGCTATTTACTTAATTAGTT  800

seq1  ATAATATGTGTATTGGTCGTACATGTACCATAGGACCCACATATAAT-GG  848
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATAATATGTGTATTGGTCGTACATGTACCATAGGACCCACATATAATGGG  850

seq1  GAAACTTGAAGGAATTGGTTCTCTCCCT-CTATCACGTGGGTCCTAAATA  897
      |||||||||||||||||||||||||||| ||||||||||||| || ||||
seq2  GAAACTTGAAGGAATTGGTTCTCTCCCTCCTATCACGTGGGTTCTTAATA  900

seq1  TTTAACTCAGTTTTTCAGGCTTGATTGCTGGAGCCTTCAGTGGTTAAGCT  947
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  TTTAACTCAGTTTTTCA-GCTTGATTGCTGGAGCCTTCAGTGG-TAAGCT  948

seq1  ACCTTGTTGTCCGGGGTTGACTTTAACATTAGTAATCACAGATCACAGGT  997
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTTGT-CGGGGTTGACTTTAACATTAGTAATCACAGATCACAGGT  997

seq1  AACATTTTATG-ATACTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  1045
       ||| |||||| ||||||| |||||||||||||||||||||||||||||
seq2  -ACA-TTTATGAATACTTA-TCTCTCTCTCTCTCTCTCTCTCTCTCTCT  1043