BAC Information

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BAC

Clone NameB6Ng01-164M21
Chromosome3 (Build37)
Map Location 77,579,126 - 77,579,800
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
Downstream geneEG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164M21.bB6Ng01-164M21.g
ACCDH957033DH957034
length1,1181,133
definitionDH957033|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M21, 5' end.DH957034|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcccctgtttggttgtgttttcctgtaattctttatgggatt
tctgtgtttcctctttaagggcttctacctgtttagccatgttctcctgt
atttctttaagtgagttattaatgcccttcttaaaatcttctaccatcat
catgagatatgattttaaatccgtgtcttgcttttagggtgtgttggggt
atccagaactagctgtggtgggcatactgatgatgcccagtgttattggt
ttctgttagtaagtttcttacgtttgcctttcaccatctggtaatctcta
atgttaatgttcaagctgtctctggctggagcttgatcctcctgtgattc
tgttagcctctgtcagcactcctgggagtccaactctcacctgagttcca
gtggtcacagtactctctgcaggcaagctctcctcttacagagcagttgt
ccaaaagtctggagctctgatccacctcctgagtcctggggtcagaactc
tccctgtaggctgactctcctctggcaaggaaggttcccaggggtctgtg
tctcagctctgccacctggctgaggatgaaggccctatgggacccctgaa
caagaagctctgttccttctgtcacccacatcctctcaggtgatcatgag
gtcctgggtttgctagaggtcccgaggtgtagagactcctctggtgccct
cagccaggttcatgcagattatgatggggctggtcctgacctgaacggat
cccagcatctggttgggtagggttcctccatttctgttcctgctggcaca
agaccctctgcaattctttagagctgatgttgaattccagtcaccagtga
tctcgtggtgatccctagtcctgtggtgtagagagtactctagagcccct
agcagcctcctctgggttcagggggaagatgacaggggtggccctgagca
gaatggatccccgtatagtttttcttaaatattacatatagaaacatctg
aggtgtctttaatggatagaaaatttgggcttacttaagaaaatgagtta
tgtccattgcaggatttgatgcacctaggggttacctataagtaaatgat
tagtctcgaacaaaaaat
gaattctcacccaaggaataccaaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatacaaatcaaaacaaccctgagat
tccatctcacaccagtcacaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccatttttggtg
ggattgcaagctttcacaaccactctggaaatcagtctgttggttcctca
gaaaattggacatagtactacaggtggatcacgcaatatgtcttctgggc
atatatccagaatatgttccaactggtaagaaggacacatgctccaccat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaattgtggtacatttacacaatg
gagtactactcagctatttaaaaaaatgaatttatgaaattcctagtcaa
atggtttgacctggagggcatcatcctgagtgaggtaacacaatcacaaa
agaactcagatgatatgtactcaatgataagtggatattagtccagaaac
ttagtatagcgagatataagatacaatttgccaaacacatgaaactcaag
aagaacgaagaccaaagtgtggacacgttgcttcttcttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagacaa
aaggatggaccatctagagactgccatatccaggggttcatcccataatc
agcctccaaacgctgacaccattgcatacattagcaagagtttgctgaaa
ggaccctgatatagctgtctcttatgagactaggccggctggggcctagc
agacataagtggatcctcacagtcagctcttggatggatcacagggcccc
aatggaggaactagagaaagtccccaaggagctaaagggatctgcaaccc
tatagtgggaacaacattatgaactaaccagtacccagaagctcttgact
ctagcttgcatatggtatcaaaagatgggctagtccgcccattcactgaa
aagagaaggccctttggacaatgcaaacttaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77579126_77579800
seq2: B6Ng01-164M21.b_503_1163

seq1  TCTGGAGCTCTGATCCACCTCCTGAGTCCTGGGGTCAGAACTCTCCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGCTCTGATCCACCTCCTGAGTCCTGGGGTCAGAACTCTCCCTGT  50

seq1  AGGCTGACTCTCCTCTGGCAAGGAAGGTTCCCAGGGGTCTGTGTCTCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGACTCTCCTCTGGCAAGGAAGGTTCCCAGGGGTCTGTGTCTCAGC  100

seq1  TCTGCCACCTGGCTGAGGATGAAGGCCCTATGGGACCCCTGAACAAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCACCTGGCTGAGGATGAAGGCCCTATGGGACCCCTGAACAAGAAG  150

seq1  CTCTGTTCCTTCTGTCACCCACATCCTCTCAGGTGATCATGAGGTCCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTCCTTCTGTCACCCACATCCTCTCAGGTGATCATGAGGTCCTGG  200

seq1  GTTTGCTAGAGGTCCCGAGGTGTAGAGACTCCTCTGGTGCCCTCAGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTAGAGGTCCCGAGGTGTAGAGACTCCTCTGGTGCCCTCAGCCAG  250

seq1  GTTCATGCAGATTATGATGGGGCTGGTCCTGACCTGAACGGATCCCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGCAGATTATGATGGGGCTGGTCCTGACCTGAACGGATCCCAGCA  300

seq1  TCTGGTTGGGTAGGGTTCCTCCATTTCTGTTCCTGCTGGCACAAGACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTGGGTAGGGTTCCTCCATTTCTGTTCCTGCTGGCACAAGACCCT  350

seq1  CTGCAATTCTTTAGAGCTGATGTTGAATTCCAGTCACCAGTGATCTCGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAATTCTTTAGAGCTGATGTTGAATTCCAGTCACCAGTGATCTCGTG  400

seq1  GTGATCCCTAGGTCCTGTGGTGTAGAGAGTACTCTAGAGCCCCTAGCAGC  450
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTGATCCCTA-GTCCTGTGGTGTAGAGAGTACTCTAGAGCCCCTAGCAGC  449

seq1  CTCCTCTGGGTTCAGGGGGAAGATGACAGGGGTGGCCCTGAGCAGAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTGGGTTCAGGGGGAAGATGACAGGGGTGGCCCTGAGCAGAATGG  499

seq1  ATCCCCGTATAGTTTTTCTTAATATATAACATATAGAAACATCTGAGGTG  550
      |||||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  ATCCCCGTATAGTTTTTCTTAA-ATATTACATATAGAAACATCTGAGGTG  548

seq1  TCTTTTAATGGAATAAGGAAAATCTGAGCTACATAAAGAAAATGAAGTTA  600
      || |||||||| |||  |||||| || |||   | ||||||||| |||||
seq2  TC-TTTAATGG-ATA--GAAAATTTGGGCTTACTTAAGAAAATG-AGTTA  593

seq1  TGTCATTTGCAGGAATTTGAATGCAACTAGAGATAACCATATAAAGTAAA  650
      ||||  ||||||| ||||| ||||| |||| | | ||| ||| |||||||
seq2  TGTCCATTGCAGG-ATTTG-ATGCACCTAGGGGTTACC-TAT-AAGTAAA  639

seq1  TTAAATTAGTCTCAGAACAAAAAAT  675
      |   ||||||||| |||||||||||
seq2  T--GATTAGTCTC-GAACAAAAAAT  661