BAC Information

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BAC

Clone NameB6Ng01-164O11
Chromosome3 (Build37)
Map Location 59,800,140 - 59,937,177
singlet/doubletdoublet
Overlap geneAadacl2, Aadac, Sucnr1
Upstream geneGpr171, P2ry14, Gpr87, P2ry13, P2ry12, Igsf10, EG666751, EG666756, EG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803, C130079G13Rik, LOC676914
Downstream geneLOC669823, LOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853, P2ry1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164O11.bB6Ng01-164O11.g
ACCDH957109DH957110
length1,1081,142
definitionDH957109|Mus musculus domesticus DNA, BAC clone: B6Ng01-164O11, 5' end.DH957110|Mus musculus domesticus DNA, BAC clone: B6Ng01-164O11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,800,140 - 59,801,251)(59,935,995 - 59,937,177)
sequence
gaattcagtatgggtaccagcgtgggtacgaggctaaacactgcagggga
aggtccaacttgaccatttctcagttccctgagagacaaccggtttgcac
ggaggttggtatctagttccagtaacaaccgataaatctttctaaggctc
tgcctcccctccccaaaagataccaagagccatgagtgtgggtcgtgaca
gcacccaccggaagaatcgggtcaatgctcccccagtcatggttaatgcc
cactcatccaaggatgagaagatcatttagtcacctcagttaagtgtggc
ctcattgaattaattcaaagggggagatgttggagaccatacggtgagaa
agtaagcctttcacagcttctcaccctaataagccaaatggccttgtgtt
aaggagctggtcacctcctcctccctatctcttgctgacaccaaagaccc
taaaagtttgaattatagtcctctcttccttatctcttcctgactcccaa
gactactaaggacatgagttatgggctgagcccagcctgacatcccggac
tgttaaggaggaatcttcattccggagataagactcagagtgcttcctgc
ctgcagtctgaattcggtcttcatgtccccagatgcccacttctttcttc
cttgttaattccccctcagaccctccctatttccccttgctgtctgctta
taacctggcgtttcagcttaataaactgagaccttgacaactcttttctt
ggtcttttttctctttctcgctcattttctcttcacgtttgcggtccccc
ccacccacgaataactgtgtcctgctggatgggacagatttttcagttcc
ttagttagaaacacaaaggtatttcatattatttgtgattattttgaagg
gtgttgtttccctatttctttctcatcctgtttatcatttgtgtatagaa
agaccattgattggttgagttaattttataatcatccgatttgctgaagt
tgtttatcaggttaggaattctcttgtggaattttaagggtcacttataa
tatactatcaatttatctgcaaataatgaaatttgacttcttccttccaa
tgacattc
gaattcaagtagattccctgaagcttccaagaattttttttttaagttta
tatctgtaccaaaatctacactgtaggaagggcagtagactcacatcttt
gaggtcagaataaaaggctggacaccccaaaatgatccagagggatggct
atatagaatggacagagatgtttagagttctattcctagaagacaatcaa
aggaaattttaaaatttgagcttgtggttgtgaaaatagtagctgcgtat
tatcagggctcaaataatagcttatcagaactctacacacgtacaaattt
tatacctttataaattatatccaaaaaccttaaacatcctcctagacctt
cataacttagacttttatatcttcagaccgcaaacactttcttaggcctt
tatattacctttctatatcttaaaacattttaagacactcacaacttatt
aaagtttccatatccttagtcctttttgacttgtatttatatacctaaga
acaccttcttagaccctccacccttacagaaacatttttagccagtcaca
accatgtgacacaagtggttgattactaagaagaagttcatttaaataaa
ggaagagtaaaaaattacactgaaatctgttttgtgagtttatcttttat
aaagaacctggcagtatggtaacctgtctttcttttttgtttctttgttg
ctttccaacaatttttttttaatttactttacattccaatcacatgcccc
tccctcctctcttctcagccccacccttacacatccttccccttactgct
ccctccccttgggtaccaccccaccctgagacatctagtcccagcagaac
taagcacatcatctctcactgatgcctaccaggcaggcagttaagggaag
gggatccatggcagggaacagatactgagacagcctgctgtgcttgtagg
gacccacatgaaaaccaccttcacatttgctacaacattaggggcctagt
ctagtctgcattctcctggttgatggccatccttgtggagccccattgga
ccagatattactcttgtggcttctgatgtgtcttgcgctctctctgcacc
tcatcaatctctaaactcaaaagtgtactgtgggcactgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_59800140_59801251
seq2: B6Ng01-164O11.b_50_1157

seq1  GAATTCAGTATGGGTACCAGCGTGGGTACGAGGCTAAACACTGCAGGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATGGGTACCAGCGTGGGTACGAGGCTAAACACTGCAGGGGA  50

seq1  AGGTCCAACTTGACCATTTCTCAGTTCCCTGAGAGACAACCGGTTTGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAACTTGACCATTTCTCAGTTCCCTGAGAGACAACCGGTTTGCAC  100

seq1  GGAGGTTGGTATCTAGTTCCAGTAACAACCGATAAATCTTTCTAAGGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTTGGTATCTAGTTCCAGTAACAACCGATAAATCTTTCTAAGGCTC  150

seq1  TGCCTCCCCTCCCCAAAAGATACCAAGAGCCATGAGTGTGGGTCGTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCCTCCCCAAAAGATACCAAGAGCCATGAGTGTGGGTCGTGACA  200

seq1  GCACCCACCGGAAGAATCGGGTCAATGCTCCCCCAGTCATGGTTAATGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCACCGGAAGAATCGGGTCAATGCTCCCCCAGTCATGGTTAATGCC  250

seq1  CACTCATCCAAGGATGAGAAGATCATTTAGTCACCTCAGTTAAGTGTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATCCAAGGATGAGAAGATCATTTAGTCACCTCAGTTAAGTGTGGC  300

seq1  CTCATTGAATTAATTCAAAGGGGGAGATGTTGGAGACCATACGGTGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGAATTAATTCAAAGGGGGAGATGTTGGAGACCATACGGTGAGAA  350

seq1  AGTAAGCCTTTCACAGCTTCTCACCCTAATAAGCCAAATGGCCTTGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCCTTTCACAGCTTCTCACCCTAATAAGCCAAATGGCCTTGTGTT  400

seq1  AAGGAGCTGGTCACCTCCTCCTCCCTATCTCTTGCTGACACCAAAGACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCTGGTCACCTCCTCCTCCCTATCTCTTGCTGACACCAAAGACCC  450

seq1  TAAAAGTTTGAATTATAGTCCTCTCTTCCTTATCTCTTCCTGACTCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTTGAATTATAGTCCTCTCTTCCTTATCTCTTCCTGACTCCCAA  500

seq1  GACTACTAAGGACATGAGTTATGGGCTGAGCCCAGCCTGACATCCCGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACTAAGGACATGAGTTATGGGCTGAGCCCAGCCTGACATCCCGGAC  550

seq1  TGTTAAGGAGGAATCTTCATTCCGGAGATAAGACTCAGAGTGCTTCCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGGAGGAATCTTCATTCCGGAGATAAGACTCAGAGTGCTTCCTGC  600

seq1  CTGCAGTCTGAATTCGGTCTTCATGTCCCCAGATGCCCACTTCTTTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTCTGAATTCGGTCTTCATGTCCCCAGATGCCCACTTCTTTCTTC  650

seq1  CTTGTTAATTCCCCCTCAGACCCTCCCTATTTCCCCTTGCTGTCTGCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTAATTCCCCCTCAGACCCTCCCTATTTCCCCTTGCTGTCTGCTTA  700

seq1  TAACCTGGCGTTTCAGCTTAATAAACTGAGACCTTGACAACTCTTTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGGCGTTTCAGCTTAATAAACTGAGACCTTGACAACTCTTTTCTT  750

seq1  GGTCTTTTTTCTCTTTCTCGCTCA-TTTCTCTTCACGTTTGCGGTCCCCC  799
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGTCTTTTTTCTCTTTCTCGCTCATTTTCTCTTCACGTTTGCGGTCCCCC  800

seq1  CCACCCACGAATAACTGTGTCCTGCTGGATGGGACAGATTTTTCAGTTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACGAATAACTGTGTCCTGCTGGATGGGACAGATTTTTCAGTTCC  850

seq1  TTAGTTAGAAACACAAAGGTATTTCATATTATTTGTGATTATTTTGAAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTAGAAACACAAAGGTATTTCATATTATTTGTGATTATTTTGAAGG  900

seq1  GTGTTGTTTCCCTAATTTCTTTCTCATCCTGTTTATCATTTGTGTATAGA  949
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTTTCCCT-ATTTCTTTCTCATCCTGTTTATCATTTGTGTATAGA  949

seq1  AAGACCATTGATTTGTTTGAGTTAATTTTATATCCATCCGATTTGCTGAA  999
      ||||||||||| ||| ||||||||||||||||  ||||||||||||||||
seq2  AAGACCATTGA-TTGGTTGAGTTAATTTTATAATCATCCGATTTGCTGAA  998

seq1  GTTGTTTATCAGGTTTAGGAATTCTCTGTTGGAATTTTTAGGGTCACTTA  1049
      ||||||||||||| |||||||||||||  ||||||||| |||||||||||
seq2  GTTGTTTATCAGG-TTAGGAATTCTCTTGTGGAATTTTAAGGGTCACTTA  1047

seq1  T-ATATACTATCATATTATCTGCAAATAATGATATTTTGACTTCTTCCTT  1098
      | |||||||||||  ||||||||||||||||| | ||||||||||||| |
seq2  TAATATACTATCAATTTATCTGCAAATAATGA-AATTTGACTTCTTCC-T  1095

seq1  TCCAATTGACATTC  1112
      ||||| ||||||||
seq2  TCCAA-TGACATTC  1108

seq1: chr3_59935995_59937177
seq2: B6Ng01-164O11.g_71_1212 (reverse)

seq1  ATGCAGAGTCCCACAGTCAAACATCTGTGAGTCTCATGGAAGAATAGGGA  50
      |||||| | ||||||||   |||  | ||||| |      |||       
seq2  ATGCAGTG-CCCACAGT---ACACTTTTGAGTTT------AGA------G  34

seq1  ATAGAAGTGGGCAAGCAGGAAGCGTCAAAGACATCATCAGAAGACCCACA  100
      || || | ||    ||||  || |   |||||| ||||||||| | || |
seq2  ATTGATGAGG---TGCAGAGAGAGCGCAAGACA-CATCAGAAGCCACA-A  79

seq1  GAGTCAACTAATCTGGGCCCATGGGGGCTCACACAGACTGGGCCATCAAC  150
      |||| |    |||||| || ||||||   ||||  ||   ||||||||||
seq2  GAGTAA---TATCTGGTCCAATGGGGCTCCACAAGGA--TGGCCATCAAC  124

seq1  CAGGGAGAATGCAGGACCTAGACCTAGGCCCCCTACATGTTTGTAGCAAA  200
      || |||||||||||   ||||| ||||| |||||| ||| ||||||||||
seq2  CA-GGAGAATGCAG--ACTAGA-CTAGG-CCCCTA-ATG-TTGTAGCAAA  167

seq1  TGTGAAGGTTGGTTTTCATGTGGGTCCCCTAACAAGCACAGCAGGGCTGT  250
      |||||||| |||||||||||||||||||   |||||||||||| ||||||
seq2  TGTGAAGG-TGGTTTTCATGTGGGTCCC--TACAAGCACAGCA-GGCTGT  213

seq1  CTCAGTATCTGTTCCCTGCCATTGGATCCCCTTCCCCTTAACTGCCTTGC  300
      ||||||||||||||||||||| ||||||||||| |||||||||||| |||
seq2  CTCAGTATCTGTTCCCTGCCA-TGGATCCCCTT-CCCTTAACTGCC-TGC  260

seq1  CTGGTTGGGCATCAGTGAGAGATGATGTGCTTAGTTCTGCTGGGACTAGA  350
      |||| | |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGG-TAGGCATCAGTGAGAGATGATGTGCTTAGTTCTGCTGGGACTAGA  309

seq1  TGTCTCAGGGTGGGGTGGTACCCAAGGGGAGGGAGCAGTAAGGGGAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGGGTGGGGTGGTACCCAAGGGGAGGGAGCAGTAAGGGGAAGGA  359

seq1  TGTGTAAGGGTGGGGCTGAGAAGAGAGGAGGGAGGGGCATGTGATTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAGGGTGGGGCTGAGAAGAGAGGAGGGAGGGGCATGTGATTGGAA  409

seq1  TGTAAAGTAAATTAAAAAAAAATTGTTGGAAAGCAACAAAGAAACAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGTAAATTAAAAAAAAATTGTTGGAAAGCAACAAAGAAACAAAAA  459

seq1  AGAAAGACAGGTTACCATACTGCCAGGTTCTTTATAAAAGATAAACTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACAGGTTACCATACTGCCAGGTTCTTTATAAAAGATAAACTCAC  509

seq1  AAAACAGATTTCAGTGTAATTTTTTACTCTTCCTTTATTTAAATGAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGATTTCAGTGTAATTTTTTACTCTTCCTTTATTTAAATGAACTT  559

seq1  CTTCTTAGTAATCAACCACTTGTGTCACATGGTTGTGACTGGCTAAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAGTAATCAACCACTTGTGTCACATGGTTGTGACTGGCTAAAAAT  609

seq1  GTTTCTGTAAGGGTGGAGGGTCTAAGAAGGTGTTCTTAGGTATATAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTAAGGGTGGAGGGTCTAAGAAGGTGTTCTTAGGTATATAAATA  659

seq1  CAAGTCAAAAAGGACTAAGGATATGGAAACTTTAATAAGTTGTGAGTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAAAAAGGACTAAGGATATGGAAACTTTAATAAGTTGTGAGTGTC  709

seq1  TTAAAATGTTTTAAGATATAGAAAGGTAATATAAAGGCCTAAGAAAGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGTTTTAAGATATAGAAAGGTAATATAAAGGCCTAAGAAAGTGT  759

seq1  TTGCGGTCTGAAGATATAAAAGTCTAAGTTATGAAGGTCTAGGAGGATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGGTCTGAAGATATAAAAGTCTAAGTTATGAAGGTCTAGGAGGATGT  809

seq1  TTAAGGTTTTTGGATATAATTTATAAAGGTATAAAATTTGTACGTGTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTTTTTGGATATAATTTATAAAGGTATAAAATTTGTACGTGTGTA  859

seq1  GAGTTCTGATAAGCTATTATTTGAGCCCTGATAATACGCAGCTACTATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTGATAAGCTATTATTTGAGCCCTGATAATACGCAGCTACTATTT  909

seq1  TCACAACCACAAGCTCAAATTTTAAAATTTCCTTTGATTGTCTTCTAGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCACAAGCTCAAATTTTAAAATTTCCTTTGATTGTCTTCTAGGA  959

seq1  ATAGAACTCTAAACATCTCTGTCCATTCTATATAGCCATCCCTCTGGATC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACTCTAAACATCTCTGTCCATTCTATATAGCCATCCCTCTGGATC  1009

seq1  ATTTTGGGGTGTCCAGCCTTTTATTCTGACCTCAAAGATGTGAGTCTACT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGGGTGTCCAGCCTTTTATTCTGACCTCAAAGATGTGAGTCTACT  1059

seq1  GCCCTTCCTACAGTGTAGATTTTGGTACAGATATAAACTTAAAAAAAAAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCCTACAGTGTAGATTTTGGTACAGATATAAACTTAAAAAAAAAA  1109

seq1  TTCTTGGAAGCTTCAGGGAATCTACTTGAATTC  1183
      |||||||||||||||||||||||||||||||||
seq2  TTCTTGGAAGCTTCAGGGAATCTACTTGAATTC  1142