MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-165J21
Chromosome	3 (Build37)
Map Location	33,294,052 - 33,295,241
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Pik3ca, Kcnmb3, Zfp639, Mfn1, Gnb4, LOC100040977, Actl6a, Mrpl47, Ndufb5, Usp13, Pex2
Downstream gene	EG545512, LOC100041058, Ttc14, Ccdc39, LOC100040232, LOC100041072, Fxr1h, Dnajc19, LOC435727, EG665636
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pik3ca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18706 MGI:1206581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnmb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435726 MGI:3612244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins

name	Zfp639 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67778 MGI:1915028
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mfn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67414 MGI:1914664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14696 MGI:104581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040977 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Actl6a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56456 MGI:1861453
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrpl47 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74600 MGI:1921850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndufb5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66046 MGI:1913296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usp13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72607 MGI:1919857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pex2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58869 MGI:1916672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG545512 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545512 MGI:3649050
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 mRNAs, 1367 ESTs, 13 Proteins

name	LOC100041058 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Ttc14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67120 MGI:1914370
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ccdc39 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:51938 MGI:1289263
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040232 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 357 ESTs, 7 Proteins

name	LOC100041072 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Fxr1h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14359 MGI:104860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajc19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67713 MGI:1914963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC435727 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins pseudo : _no_value

name	EG665636 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665636 MGI:3645089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Pik3ca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679316 GeneID:18706 MGI:1206581
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol 3-kinase, catalytic, alpha polypeptide transcript_id : NM_008839.1

name	Kcnmb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250873 GeneID:435726 MGI:3612244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : potassium large conductance calcium-activated channel, subfamily M, beta member 3 transcript_id : XM_001475546.1

name	Zfp639 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803090 GeneID:67778 MGI:1915028
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 639 transcript_id : NM_144519.3

name	Mfn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351556 GeneID:67414 MGI:1914664
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitofusin 1 transcript_id : NM_024200.3

name	Gnb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542898 GeneID:14696 MGI:104581
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein, beta 4 transcript_id : NM_013531.2

name	LOC100040977 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250875 GeneID:100040977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040977 transcript_id : XM_001475592.1

name	Actl6a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9789892 GeneID:56456 MGI:1861453
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin-like 6A transcript_id : NM_019673.1

name	Mrpl47 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:29826331 GeneID:74600 MGI:1921850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L47 transcript_id : NM_029017.1

name	Ndufb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754143 GeneID:66046 MGI:1913296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5 transcript_id : NM_025316.2

name	Usp13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131141 GeneID:72607 MGI:1919857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 13 (isopeptidase T-3) transcript_id : NM_001013024.2

name	Pex2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372154 GeneID:58869 MGI:1916672
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxin 2 transcript_id : NM_021483.2

name	EG545512 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250877 GeneID:545512 MGI:3649050
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 mRNAs, 1367 ESTs, 13 Proteins product : predicted gene, EG545512 transcript_id : XM_001475688.1

name	LOC100041058 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250879 GeneID:100041058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to heterochromatin protein 1, binding protein 3 transcript_id : XM_001475724.1

name	Ttc14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114687666 GeneID:67120 MGI:1914370
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 14 transcript_id : NM_025978.3

name	Ttc14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114687674 GeneID:67120 MGI:1914370
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 14 transcript_id : NM_027619.3

name	Ccdc39 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114687665 GeneID:51938 MGI:1289263
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 39 transcript_id : NM_026222.2

name	LOC100040232 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250839 GeneID:100040232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 357 ESTs, 7 Proteins product : similar to calcium-regulated heat-stable protein (24kD) transcript_id : XM_001474886.1

name	LOC100041072 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250881 GeneID:100041072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041072 transcript_id : XM_001475742.1

name	Fxr1h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17998693 GeneID:14359 MGI:104860
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fragile X mental retardation gene 1, autosomal homolog transcript_id : NM_008053.1

name	Dnajc19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061473 GeneID:67713 MGI:1914963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 19 transcript_id : NM_001026211.1

name	Dnajc19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061476 GeneID:67713 MGI:1914963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 19 transcript_id : NM_026332.3

name	EG665636 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250884 GeneID:665636 MGI:3645089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG665636 transcript_id : XM_978322.2

name	Pik3ca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679317 GeneID:18706 MGI:1206581
definition	GO_component : GO:0030027 - lamellipodium [Evidence IDA]; GO:0005942 - phosphoinositide 3-kinase complex [Evidence IPI] GO_function : GO:0004428 - inositol or phosphatidylinositol kinase activity [Evidence IEA]; GO:0043560 - insulin receptor substrate binding [Evidence IPI]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016303 - phosphatidylinositol 3-kinase activity [Evidence IDA]; GO:0046934 - phosphatidylinositol-4,5-bisphosphate 3-kinase activity [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IMP]; GO:0006006 - glucose metabolism [Evidence IMP]; GO:0043066 - negative regulation of apoptosis [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0043491 - protein kinase B signaling cascade [Evidence IMP]; GO:0040014 - regulation of body size [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : phosphatidylinositol 3-kinase, catalytic, alpha polypeptide protein_id : NP_032865.1

name	Kcnmb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250874 GeneID:435726 MGI:3612244
definition	codon_start : 1 product : similar to calcium-activated potassium channel beta 3 subunit protein_id : XP_001475596.1

name	Zfp639 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21362299 CCDS:CCDS17295.1 GeneID:67778 MGI:1915028
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 639 protein_id : NP_653102.1

name	Mfn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789169 CCDS:CCDS17296.1 GeneID:67414 MGI:1914664
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005741 - mitochondrial outer membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007275 - development [Evidence IEA]; GO:0008053 - mitochondrial fusion [Evidence IMP] codon_start : 1 exception : mismatches in translation product : mitofusin 1 protein_id : NP_077162.1

name	Gnb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542899 CCDS:CCDS17297.1 GeneID:14696 MGI:104581
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence ISS] GO_function : GO:0003924 - GTPase activity [Evidence ISS]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0005083 - small GTPase regulator activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : guanine nucleotide-binding protein, beta-4 subunit protein_id : NP_038559.2

name	LOC100040977 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250876 GeneID:100040977
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475642.1

name	Actl6a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789893 CCDS:CCDS17298.1 GeneID:56456 MGI:1861453
definition	GO_component : GO:0005884 - actin filament [Evidence IEA]; GO:0016585 - chromatin remodeling complex [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003682 - chromatin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005200 - structural constituent of cytoskeleton [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006338 - chromatin remodeling [Evidence IDA]; GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : actin-like 6 product : BRG1/brm-associated factor 53A protein_id : NP_062647.1

name	Mrpl47 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29826332 CCDS:CCDS17299.1 GeneID:74600 MGI:1921850
definition	GO_component : GO:0005761 - mitochondrial ribosome [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : metanephros-derived tubulogenic factor product : mitochondrial ribosomal protein L47 protein_id : NP_083293.1

name	Ndufb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754144 CCDS:CCDS17300.1 GeneID:66046 MGI:1913296
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0003954 - NADH dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 product : NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5 protein_id : NP_079592.2

name	Usp13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61316410 CCDS:CCDS17301.1 GeneID:72607 MGI:1919857
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin specific protease 13 (isopeptidase T-3) protein_id : NP_001013042.1

name	Pex2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946890 CCDS:CCDS17302.1 GeneID:58869 MGI:1916672
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : peroxisomal targeting signal 1 receptor-like product : peroxin 2 protein_id : NP_067458.1

name	EG545512 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250878 GeneID:545512 MGI:3649050
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475738.1

name	LOC100041058 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250880 GeneID:100041058
definition	codon_start : 1 product : similar to heterochromatin protein 1, binding protein 3 protein_id : XP_001475774.1

name	Ttc14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110611921 GeneID:67120 MGI:1914370
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : tetratricopeptide repeat domain 14 isoform a protein_id : NP_081895.2

name	Ttc14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29336051 CCDS:CCDS17303.1 GeneID:67120 MGI:1914370
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : tetratricopeptide repeat domain 14 isoform b protein_id : NP_080254.2

name	Ccdc39 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312922 CCDS:CCDS17304.1 GeneID:51938 MGI:1289263
definition	codon_start : 1 product : coiled-coil domain containing 39 protein_id : NP_080498.1

name	LOC100040232 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250840 GeneID:100040232
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474936.1

name	LOC100041072 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250882 GeneID:100041072
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475792.1

name	Fxr1h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17998694 GeneID:14359 MGI:104860
definition	GO_component : GO:0043034 - costamere [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007517 - muscle development [Evidence IMP]; GO:0007519 - striated muscle development [Evidence IEA] codon_start : 1 note : fragile X mental retardation gene, autosomal homolog product : fragile X mental retardation gene 1, autosomal homolog protein_id : NP_032079.1

name	Dnajc19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71061474 GeneID:67713 MGI:1914963
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : translocase of the inner mitochondrial membrane 14 isoform 2 protein_id : NP_001021382.1

name	Dnajc19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71061477 GeneID:67713 MGI:1914963
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : translocase of the inner mitochondrial membrane 14 isoform 1 protein_id : NP_080608.3

name	EG665636 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250885 GeneID:665636 MGI:3645089
definition	codon_start : 1 product : hypothetical protein protein_id : XP_983416.2

name	LOC435727 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250883 GeneID:435727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins product : similar to Ab1-115 pseudo : _no_value transcript_id : XR_032419.1

clone name	MSMg01-434D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423C04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-369K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340J09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-165J21.b	B6Ng01-165J21.g
ACC	DH957629	DH957630
length	1,207	1,180
definition	DH957629\|Mus musculus domesticus DNA, BAC clone: B6Ng01-165J21, 5' end.	DH957630\|Mus musculus domesticus DNA, BAC clone: B6Ng01-165J21, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa atcagggactagacaaggcggcccgctttctccctaccttttcaacatag tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg tgactctaactaaggaggtgaaagatctgtatgataaaaacttcaaatct ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc taggatagcaaaaactcttctcaaggataaaagaacttctggtggaatca ccatgcctgacctaaagctttactacagagcaattgtgataaaaattgca tggtactggtatagagacagacaagtagaccaatgaaatagaattgaaga cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag ctaaaaccatccagtggaagaagacagcattttcaacaattggtgctggc acaactggtgttatcgtgtagaagatgcgaatcgatccatacctatctcc ttgtagtaggtcaaatctacgtggatcaagacttcacatcaaaccagaga cacctgaaacctaatagaggagtagtggggaaaagcctccgaagattttg gcccaggtaaaatcttgaaagaaacagcaaattgcttgtgctgtagatcc agaaattgacaatggaactattgaatccaaggttctcgccaaggcaagga aatcggt	gaattctcattcacttataaacctccaggggttagtgaatatttacatac acaaattgagtgctgatagagtcacagagctgcatgcatgagtcaacacc ttaggatttatttccataaccttcaatttgtaaacctgagaacagtttgt tttcttgtctgcatggtacagttttagaactatgattgattaactcctta taagaaaaccttggtctggaaccaggcacacacattgaaatgaaatttat aggatttgggaataaaggagtcttatactgagaaatgactgcatctctag aaaatctataatttcacacagcactgagaaggttccaatgaacattttca caatgtaaagggctgataatgtaaaactggtgtctggaccgcttgggagc cacttctcagagaggtgttttaattaggcagaccatttggagctgatgat tggaaacttgaaattagcataatgaattatcttatctttatttcccttat aatatatgcccacagttttaaatttcattgctaactaacctaaaaagtta tcagtgcagggaaacacacacacacacacacacacacacacacacacaca cacacagaaaagttcccatcagaaagctctcagccctttgtgcagttatg taacacccactggaaacaaaattttcccaattgggaattacagttggaaa gttgcattcagagtgaaagtgtataaaatgagattaaaaatccttttaaa aattctcagcaatttttaatgaaaagcaggagagaaacaagactctctgg actctttcatttctgagcaggaagtggaacctgttgaatttgtaaagaca aggctaacagaaatgagagcgaagtcccctcgccagcgactagacaaagg aagtttgtttctcatgcagtgcaaccctgaagcatggtttttcaccaaag gactcaaacacccttatttctccatctgtattccagcgctgatttcatgt ccactggttttacttgtatctgtctggaagggagaactacatgatcacta tccctcagcggtttgtggtccaccttaaagtcagacacagctttctccca tctcttgactaagtttagtccattggactatggctggggctctgggatat accacctgagtgtctctcaaaaagaagagc
quality values	Open. Hide. 61 43 23 24 53 36 31 37 52 61 50 61 55 38 61 50 61 61 55 50 55 52 55 41 55 55 36 15 17 12 12 10 6 12 12 13 13 43 50 49 59 59 59 59 59 59 55 59 61 59 59 59 59 59 61 61 61 61 61 59 55 61 59 59 61 61 61 61 61 59 55 59 59 43 28 43 41 36 50 39 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 59 59 59 59 59 61 61 59 59 61 59 59 59 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 55 59 61 59 59 61 61 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 59 61 59 61 59 59 59 59 55 61 61 61 61 61 61 59 61 61 59 61 59 59 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 39 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 53 61 43 61 61 61 61 53 61 61 53 42 38 57 57 57 57 57 57 47 40 57 57 57 57 53 53 57 57 57 57 57 50 57 57 57 47 47 57 57 53 53 53 57 57 39 36 53 50 57 53 52 57 57 57 53 53 57 57 57 53 53 57 53 50 57 53 53 57 57 57 57 50 52 34 52 57 57 45 53 45 57 53 57 57 53 57 50 57 51 33 57 57 45 57 52 57 53 42 50 57 57 57 57 57 43 57 53 50 41 41 38 47 53 53 57 23 57 53 53 53 47 46 52 57 53 53 57 52 30 36 52 45 53 50 39 47 43 45 53 52 45 53 53 30 53 53 52 47 57 57 52 50 38 57 37 50 57 53 37 52 53 42 57 57 52 40 38 40 52 50 24 57 57 57 57 47 34 57 43 52 40 53 34 33 47 37 43 40 57 57 57 39 52 48 53 44 53 53 42 43 33 25 32 57 33 29 45 57 57 53 31 53 31 33 48 43 48 33 53 53 35 53 53 53 37 34 40 33 47 43 28 33 43 37 53 40 53 40 22 53 35 34 57 46 37 33 46 51 48 27 39 38 38 48 25 32 48 30 39 41 29 24 43 36 30 30 34 28 48 51 51 51 32 29 33 31 27 29 39 44 51 28 28 29 29 48 48 29 29 37 29 39 48 38 33 39 28 33 37 35 33 29 33 34 28 33 29 18 47 30 29 29 47 29 51 33 29 29 21 32 27 28 32 29 25 28 28 29 19 51 29 18 23 46 51 35 38 43 28 32 34 51 39 21 43 26 29 24 43 39 30 24 29 29 35 23 31 23 31 27 33 26 16 19 31 27 31 34 31 31 23 26 19 33 46 19 35 26 34 29 29 51 46 34 22 38 23 35 34 35 20 14 15 29 33 16 25 14 22 26 6 27 25 23 26 29 17 28 51 51 33 21 18 24 29 23 11 33 25 27 23 14 29 26 27 22 22 26 27 29 20 21 30 20 26 8 8 9 21 20 22 28 31 12 14 38 18 20 19 38 30 11 51 20 22 15 14 31 27 29 30 26 21 11 20 33 13 34 29 27 31 28 23 29 34 29 25 19 24 9 30 9 27 13 6 17 7 21 9 23 14 35 17 25 34 17 11 14 5 9 12 30 13 21 19 12 6 6 4 5 8 18 14 10 28 10 26 17 9 34 11 19 27 9 8 20 14 15 11 7 7 14 29 22 10 34 27 8 10 18 4 4 8 5 7 12 13 11 7 4 10 24 10 12 23 31 30 13 4 30 25 11 9 20 5 12 9 10 3 4 4 4 20 9 27 32 24 10 21 6 3 4 5 18 6 1 4 30 16 13 4 3 6 8 6 5 7 3 1 3 19 12 6 5 4 3 4 10 5 4 7 12 16 13 4 5 3 14 19 20 6 5 22 4 20 12 8 5 4 7 4 7 13 8 9 10 9 5 3 14 4 12 17 5 5 17 3 10 3 4 2 5 4 2 3 14 5 15 6 8 13 15 4 5 4 8 3 6 16 8 20 20 4 13 11 8 4 9 10 5 4 18 4 4 7	Open. Hide. 55 61 55 47 61 55 10 10 14 12 12 7 7 10 13 12 28 36 29 50 52 59 59 55 61 59 59 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 28 38 23 26 26 28 44 59 59 49 59 61 59 61 61 61 61 59 44 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 53 42 61 61 52 47 61 61 61 61 61 53 61 57 53 39 57 57 57 57 57 57 47 57 53 52 47 57 57 57 57 57 57 53 57 57 53 40 51 53 57 57 57 53 57 57 57 57 57 57 57 57 57 52 45 52 42 47 40 57 53 57 57 57 57 53 51 57 57 53 53 53 53 53 53 57 57 57 57 57 47 53 53 47 41 41 57 43 47 47 32 53 50 46 57 52 50 50 50 39 21 47 39 46 50 41 57 53 53 52 52 30 52 52 52 42 53 53 53 42 48 40 38 33 21 52 31 36 52 45 50 53 53 36 47 52 47 37 47 42 57 41 52 53 35 34 24 57 57 31 21 57 57 42 53 57 37 35 38 53 39 57 50 53 50 38 31 50 40 42 29 37 52 35 43 35 39 53 53 42 20 53 40 44 30 52 44 44 37 35 53 37 26 40 30 57 31 37 35 40 29 31 41 36 53 46 37 30 53 52 27 18 9 40 29 57 57 57 41 37 41 48 36 53 53 40 40 53 57 53 45 19 13 33 29 37 33 34 35 24 31 29 57 57 57 32 23 13 20 40 31 51 51 47 25 30 25 8 19 38 24 46 24 47 46 21 26 32 30 14 32 29 38 48 41 39 30 31 45 31 21 31 36 29 46 17 20 25 41 46 43 29 28 31 45 18 33 38 14 41 27 33 16 10 28 23 30 28 19 29 29 32 12 30 11 10 39 26 35 33 14 24 30 41 29 20 38 28 32 26 27 43 23 29 25 35 28 24 17 39 41 20 26 34 39 23 46 28 20 17 26 41 19 29 33 51 51 33 29 28 27 29 24 26 25 28 22 16 20 31 33 22 28 18 6 41 20 7 15 23 29 16 23 46 30 22 14 51 31 34 27 24 17 29 29 25 28 29 27 33 22 24 20 29 36 21 23 14 36 16 14 23 14 23 28 27 15 51 51 51 30 17 16 12 29 9 31 17 10 19 18 17 23 16 12 51 26 21 17 26 51 28 20 18 18 30 44 8 6 30 7 22 14 23 31 6 7 6 6 9 21 9 18 14 14 10 8 6 15 30 28 19 35 16 7 22 22 24 24 13 6 6 10 17 21 7 5 34 37 29 17 29 29 20 16 12 7 12 17 8 5 5 9 7 29 18 12 13 5 42 13 17 10 29 29 15 15 20 12 12 11 25 28 17 6 7 9 9 9 9 16 26 8 11 16 14 5 3 5 13 2 24 9 21 11 10 22 9 13 16 9 14 25 11 13 10 26 12 4 3 5 5 6 24 4 4 12 11 8 14 3 25 10 20 6 5 5 3 5 9 3 5 10 6 13 20 20 8 4 14 4 9 13 23 13 10 4 6 18 17 5 7 15 7 4 18 9 5 9 9 4 4 10 9 8 27 30 13 3 3 3 4 9 19 27 5 3 12 3 1 3 1 2 3 14 5 5 14 4 10 12 4 6 7 7 3 1 3 7 5 21 4 8 6 10 6 2 3 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_33294052_33295241
seq2: B6Ng01-165J21.g_66_1244

seq1  GAATTCTCATTCACTTATAAACCTCCAGGGGTTAGTGAATATTTACATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTCACTTATAAACCTCCAGGGGTTAGTGAATATTTACATAC  50

seq1  ACAAATTGAGTGCTGATAGAGTCACAGAGCTGCATGCATGAGTCAACACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTGAGTGCTGATAGAGTCACAGAGCTGCATGCATGAGTCAACACC  100

seq1  TTAGGATTTATTTCCATAACCTTCAATTTGTAAACCTGAGAACAGTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATTTATTTCCATAACCTTCAATTTGTAAACCTGAGAACAGTTTGT  150

seq1  TTTCTTGTCTGCATGGTACAGTTTTAGAACTATGATTGATTAACTCCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTCTGCATGGTACAGTTTTAGAACTATGATTGATTAACTCCTTA  200

seq1  TAAGAAAACCTTGGTCTGGAACCAGGCACACACATTGAAATGAAATTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAACCTTGGTCTGGAACCAGGCACACACATTGAAATGAAATTTAT  250

seq1  AGGATTTGGGAATAAAGGAGTCTTATACTGAGAAATGACTGCATCTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGGGAATAAAGGAGTCTTATACTGAGAAATGACTGCATCTCTAG  300

seq1  AAAATCTATAATTTCACACAGCACTGAGAAGGTTCCAATGAACATTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTATAATTTCACACAGCACTGAGAAGGTTCCAATGAACATTTTCA  350

seq1  CAATGTAAAGGGCTGATAATGTAAAACTGGTGTCTGGACCGCTTGGGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTAAAGGGCTGATAATGTAAAACTGGTGTCTGGACCGCTTGGGAGC  400

seq1  CACTTCTCAGAGAGGTGTTTTAATTAGGCAGACCATTTGGAGCTGATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTCAGAGAGGTGTTTTAATTAGGCAGACCATTTGGAGCTGATGAT  450

seq1  TGGAAACTTGAAATTAGCATAATGAATTATCTTATCTTTATTTCCCTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTTGAAATTAGCATAATGAATTATCTTATCTTTATTTCCCTTAT  500

seq1  AATATATGCCCACAGTTTTAAATTTCATTGCTAACTAACCTAAAAAGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATGCCCACAGTTTTAAATTTCATTGCTAACTAACCTAAAAAGTTA  550

seq1  TCAGTGCAGGGAAACACACACACACACACACACACACACACACACACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCAGGGAAACACACACACACACACACACACACACACACACACACA  600

seq1  CACACAGAAAAGTTCCCATCAGAAAGCTCTCAGCCCTTTGTGCAGTTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAAAAGTTCCCATCAGAAAGCTCTCAGCCCTTTGTGCAGTTATG  650

seq1  TAACACCCACTGGAAACAAAATTTTCCCAATTGGGAATTACAGTTGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACCCACTGGAAACAAAATTTTCCCAATTGGGAATTACAGTTGGAAA  700

seq1  GTTGCATTCAGAGTGAAAGTGTATAAAATGAGATTAAAAATCCTTTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCATTCAGAGTGAAAGTGTATAAAATGAGATTAAAAATCCTTTTAAA  750

seq1  AATTCTCAGCAATTTTTAATGAAAAGCAGGAGAGAAACAAGACTCTCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCAGCAATTTTTAATGAAAAGCAGGAGAGAAACAAGACTCTCTGG  800

seq1  ACTCTTTCATTTCTGAGCAGGAAGTGGAACCTGTTGAATTTGTAAAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTCATTTCTGAGCAGGAAGTGGAACCTGTTGAATTTGTAAAGACA  850

seq1  AGGCTAACAGAAATGAGAGCGAAGTCCCCTCGCCAGCGACTAGACAAAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAACAGAAATGAGAGCGAAGTCCCCTCGCCAGCGACTAGACAAAGG  900

seq1  AAGTTTGTTTCTCATGCAGTGCAACCCTGAAAGCATGGTTTTTCACCAAA  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAGTTTGTTTCTCATGCAGTGCAACCCTG-AAGCATGGTTTTTCACCAAA  949

seq1  GGACTCAAACACCCTTATTTCTTCCATCCTGTATTCCAGCGGCTGATTTC  1000
      ||||||||||||||||||||| ||||| |||||||||||| |||||||||
seq2  GGACTCAAACACCCTTATTTC-TCCAT-CTGTATTCCAGC-GCTGATTTC  996

seq1  AATGT-CACTGGTTTTACTTGTATCTGTCTGGAAGGGAGAACTACAATGA  1049
       |||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  -ATGTCCACTGGTTTTACTTGTATCTGTCTGGAAGGGAGAACTAC-ATGA  1044

seq1  TCACTAT-CCTCAGCGGGTTTGTGGGTCCACCTTAAAAGGTCAGACACAG  1098
      ||||||| ||||||| ||||||| |||||||||||||  |||||||||||
seq2  TCACTATCCCTCAGC-GGTTTGT-GGTCCACCTTAAA--GTCAGACACAG  1090

seq1  CCTTTCCTCTCATTCTCTTGACTAAAGTTTAGTCCCATTGAACTAT-GCT  1147
      |  || ||| || |||||||||| ||||||||| |||||| ||||| |||
seq2  C--TTTCTCCCA-TCTCTTGACT-AAGTTTAGT-CCATTGGACTATGGCT  1135

seq1  GGGGGCTGGGGATAGGGCCAACCTGAGTGTC---CTGAAAGAAGAG  1190
      ||||    ||||||    | |||||||||||   |  |||||||||
seq2  GGGGCTCTGGGATA--TACCACCTGAGTGTCTCTCAAAAAGAAGAG  1179

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information