BAC Information

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BAC

Clone NameB6Ng01-165K22
Chromosome3 (Build37)
Map Location 140,656,086 - 140,657,116
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC229883, LOC621343, 4930590L14Rik
Downstream genePdha2, Unc5c, LOC100039923, Bmpr1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165K22.bB6Ng01-165K22.g
ACCDH957675DH957676
length1,2191,053
definitionDH957675|Mus musculus domesticus DNA, BAC clone: B6Ng01-165K22, 5' end.DH957676|Mus musculus domesticus DNA, BAC clone: B6Ng01-165K22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttgaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagaggatttgaagtttttatcat
acagattctttccacctccttagttaggagtcacgcccaaagaattttta
tatttatttgtgactaattgagaagggggttggttttccctcatattctt
ttctcaccctggttatttccttgttatagagaaaaggcactgaactttgt
tctgagtttattttattatcagctactctccgagcgtgttatacagctta
aggaggtctctggtcggattttagtaccttaatacatcctatcacttgcg
aatggaatatggacttccgtcaattgatcattgactacattggtgcggta
tgtccaggcagtacatcag
gaattcaaaataagtatgcaaaaaataatttaatgtgataatgatgaaga
ttagcatggaaaagagtagatgttgtttaacatcctataaaataagatta
accatctttttcctgtatttataaaatactatacagcaatctaaaccaga
aataaggataatgtaagtaatatccattacctgactattctatatctgta
ttcatgataacataattgtttggaaaggtttattctttgtattttatatt
ctagaattccaaacttcattgtttttaacaatgtgttttgctcttgcata
tctactaaatgccaactctattttccacgattataacagcaaaatattaa
gtaaaataaatatatagccaatgatacttaagtgtagcaaatattgctca
attaagtacctttgttaaatgttgtggagaaacagacaaaactgacatat
actatgaaataaaaatgtttattcttttgagactccactatcaaactaac
atgttgaaattatagccaataatgtgattttgttgttgaagtgacatcta
gatgtaactatggtgataagcatagatctattttgagtgttctgcatgca
gcagcccagtttgaccagcaccatttgttgaagacactttttatagtcca
gtgtgtattttagcttctttatgaaaaaatcaggtatcaatcggtgtgtg
gattttgtgtcaaggtgttcaaattgattctgtggaaaaatatttgtcca
ctttgtgcaaataccatgctatttttttactataactctgtaatacaatt
tgaggtcgggatggtgatacctctagtacttcttttattattcaaaattg
tttagctgtgttttgatatgaaggtaaaaactagcgtttcaaatctgtga
agaattgtgttagatttttgatggagatacattgaatctcgagattgctt
tttggtaggatggcattgttagtatacataatcccactatggcatgatta
ggggtaactttctgtcttctgatatcttcttccatttccttcctgatgtt
tta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_140656086_140657116
seq2: B6Ng01-165K22.g_94_1120 (reverse)

seq1  TAAAACATTCAGGAAAGAAATTGAAGAAGATATCAGAAGACAGAAAGTTA  50
      ||||||| ||||||| ||||| ||||||||||||||||||||||||||||
seq2  TAAAACA-TCAGGAAGGAAATGGAAGAAGATATCAGAAGACAGAAAGTTA  49

seq1  CCCCTAATCATGCATAAGTGGGATTAATGTATACTAACAATGGCCATCCT  100
      |||||||||||||   ||||||||| ||||||||||||||| ||||||||
seq2  CCCCTAATCATGCCATAGTGGGATT-ATGTATACTAACAAT-GCCATCCT  97

seq1  ACC-AAAAGCAATCTCGAGATTCAATGTATCTCCATCAAAAATCTAACAC  149
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAAGCAATCTCGAGATTCAATGTATCTCCATCAAAAATCTAACAC  147

seq1  AATTCTTCACAGATTTTGAAACGCTAGTTTTTACCTTCATATCAAAACAC  199
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AATTCTTCACAGA-TTTGAAACGCTAGTTTTTACCTTCATATCAAAACAC  196

seq1  AGCTAAAACAATTTTGAATAATAAAAGAAGTACTAGAGGTATCACCATCC  249
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCT-AAACAATTTTGAATAATAAAAGAAGTACTAGAGGTATCACCATCC  245

seq1  CGACCTCAAATTGTATTACAGAGTTATAGTAATAAAAATAGCATGGTATT  299
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CGACCTCAAATTGTATTACAGAGTTATAGTAA-AAAAATAGCATGGTATT  294

seq1  TGCACAAAGTGGACAAATATTTTTCCACAGAATCAATTTGAACACCTTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAAGTGGACAAATATTTTTCCACAGAATCAATTTGAACACCTTGA  344

seq1  CAC-AAATCCACACACCGATTGATACCTGATTTTTTCATAAAGAAGCTAA  398
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATCCACACACCGATTGATACCTGATTTTTTCATAAAGAAGCTAA  394

seq1  AATACACACTGGACTATAAAAAGTGTCTTCAACAAATGGTGCTGGTCAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACACTGGACTATAAAAAGTGTCTTCAACAAATGGTGCTGGTCAAA  444

seq1  CTGGGCTGCTGCATGCAGAACACTCAAAATAGATCTATGCTTATCACCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTGCTGCATGCAGAACACTCAAAATAGATCTATGCTTATCACCAT  494

seq1  AGTTACATCTAGATGTCACTTCAACAACAAAATCACATTATTGGCTATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACATCTAGATGTCACTTCAACAACAAAATCACATTATTGGCTATAA  544

seq1  TTTCAACATGTTAGTTTGATAGTGGAGTCTCAAAAGAATAAACATTTTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACATGTTAGTTTGATAGTGGAGTCTCAAAAGAATAAACATTTTTA  594

seq1  TTTCATAGTATATGTCAGTTTTGTCTGTTTCTCCACAACATTTAACAAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAGTATATGTCAGTTTTGTCTGTTTCTCCACAACATTTAACAAAG  644

seq1  GTACTTAATTGAGCAATATTTGCTACACTTAAGTATCATTGGCTATATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTAATTGAGCAATATTTGCTACACTTAAGTATCATTGGCTATATAT  694

seq1  TTATTTTACTTAATATTTTGCTGTTATAATCGTGGAAAATAGAGTTGGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTACTTAATATTTTGCTGTTATAATCGTGGAAAATAGAGTTGGCA  744

seq1  TTTAGTAGATATGCAAGAGCAAAACACATTGTTAAAAACAATGAAGTTTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAGATATGCAAGAGCAAAACACATTGTTAAAAACAATGAAGTTTG  794

seq1  GAATTCTAGAATATAAAATACAAAGAATAAACCTTTCCAAACAATTATGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAATATAAAATACAAAGAATAAACCTTTCCAAACAATTATGT  844

seq1  TATCATGAATACAGATATAGAATAGTCAGGTAATGGATATTACTTACATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGAATACAGATATAGAATAGTCAGGTAATGGATATTACTTACATT  894

seq1  ATCCTTATTTCTGGTTTAGATTGCTGTATAGTATTTTATAAATACAGGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTATTTCTGGTTTAGATTGCTGTATAGTATTTTATAAATACAGGAA  944

seq1  AAAGATGGTTAATCTTATTTTATAGGATGTTAAACAACATCTACTCTTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGGTTAATCTTATTTTATAGGATGTTAAACAACATCTACTCTTTT  994

seq1  CCATGCTAATCTTCATCATTATCACATTAAATT  1031
      |||||||||||||||||||||||||||||||||
seq2  CCATGCTAATCTTCATCATTATCACATTAAATT  1027