BAC Information

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BAC

Clone NameB6Ng01-165P24
Chromosome3 (Build37)
Map Location 122,486,616 - 122,486,725
singlet/doubletsinglet
Overlap genePde5a
Upstream geneAbcd3, LOC100043298, Arhgap29, Abca4, EG668788, LOC626807, LOC100043724, Gclm, Ppia-ps3_1245.1, Dnttip2, LOC675117, LOC100043726, Bcar3, Fnbp1l, Ppia-ps3_2252.1
Downstream geneLOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2, Synpo2, Sec24d, G430022H21Rik, Prss12, EG668804, Ndst3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165P24.bB6Ng01-165P24.g
ACCDH957903DH957904
length1,181241
definitionDH957903|Mus musculus domesticus DNA, BAC clone: B6Ng01-165P24, 5' end.DH957904|Mus musculus domesticus DNA, BAC clone: B6Ng01-165P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagaaagtctttaagtttttatttcttccctaaacaagttatca
tgagtagagagttgttcattttccatgagtctatcagttttctgttgttt
ttgttgttattgaagaccaggcttacttaagtctatggtgatctgattgg
aatcatgagattatttcaatcctcttgtatctgttgaggcttgttttgtg
attgattaaatggtgaatattggagaaggtaccatgaggtactaagaaga
aggtatattcttgtgttttagagtgaaatgttctgtaggattctcttaaa
tccatttggttattaacctcaattagttttagtgtgtctctgtttagttt
ttgtttcaataacctgtcctattagtgagagtgaagtgttgttgaattct
cccactattattgtgtggggttcaatgtgtgttttgaactttagtaaagt
ttcttttatgaatgtgggtacccttgcatttggggcattgatgtccagaa
ttgagactttctcttggtgggcctgggctggcatttgtattcctttagtg
tctgcaagaacactatccaggcagttcttgctttcatagtctttggtgag
aagtctattgtaattctgataggtctgccttacttggcctttttccctta
taactcttaattttttttttttttttgttctatgcatttagaattgatta
ttatgtgacaaggtttcttttctggtcaaatctctttgttgctctatagg
cttcttgtacatttatggccatctctttctttagattggggagatatctt
tctatgcttttgcttatttgtttgttttttcttctctttatgtacatttc
aaatgttatcccttttcccagtcccaccccgaaacctcctatccaattct
cccctccccatgattctgtgagggtggtctctcacccatttcacccaact
cccaacaaccctgcccaacacttttctctacactggaacaattgagcctc
caccagaatcctttgcaaccttttctctcattaaatgcccagcaagggcc
atccctctggcacatatggtcagcctggaggcaatgggtccctccatatg
gtactactttattagtcctggggagacttaattgggctggtgggctgaat
agttgtgtcttcctagtgggggttgcgcaga
ctgaacagaacaccaatggcttttgctgcaagatcaagaatcaacaaatg
ggtcctcataaaattgcaaagcttctgtaaggcaaaggacactgtcaata
agacaaaacagcaaccaacagattgggaaagatctttatcaatcctaaat
ctgataaggagctaatatatatatatatatatatatatatatatatatat
atatatatatatatgtgtatatatatatatatatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_122486616_122486725
seq2: B6Ng01-165P24.g_75_194 (reverse)

seq1  ATCTCTTGGTTGCCTTTTTGTCTTATTGACAGTGTCCTTTGC--------  42
      |||| ||||||||  |||||||||||||||||||||||||||        
seq2  ATCTGTTGGTTGCTGTTTTGTCTTATTGACAGTGTCCTTTGCCTTACAGA  50

seq1  --CTTTGCAATTTTATGAGGTACCATTTGTTGATCCTTGATCTTACAGCA  90
        ||||||||||||||||||  |||||||||||| ||||||||| |||||
seq2  AGCTTTGCAATTTTATGAGGACCCATTTGTTGATTCTTGATCTTGCAGCA  100

seq1  CAAGCCATTGCTGTTCTGTT  110
       ||||||||| |||||||||
seq2  AAAGCCATTGGTGTTCTGTT  120